The largest oxigen bearing organic molecule repository

We present the first detection of complex aldehydes and isomers in three typical molecular clouds located within 200pc of the center of our Galaxy. We find very large abundances of these complex organic molecules (COMs) in the central molecular zone (CMZ), which we attribute to the ejection of COMs from grain mantles by shocks. The relative abundances of the different COMs with respect to that of CH3OH are strikingly similar for the three sources, located in very different environments in the CMZ. The similar relative abundances point toward a unique grain mantle composition in the CMZ. Studying the Galactic center clouds and objects in the Galactic disk having large abundances of COMs, we find that more saturated molecules are more abundant than the non-saturated ones. We also find differences between the relative abundance between COMs in the CMZ and the Galactic disk, suggesting different chemical histories of the grain mantles between the two regions in the Galaxy for the complex aldehydes. Different possibilities for the grain chemistry on the icy mantles in the GC clouds are briefly discussed. Cosmic rays can play an important role in the grain chemistry. With these new detections, the molecular clouds in the Galactic center appear to be one of the best laboratories for studying the formation of COMs in the Galaxy.Comment: 20 pages, 4 figures, accepted in Ap

Dot Immunobinding Assay for the Rapid Serodetection of Scedosporium/Lomentospora in Cystic Fibrosis Patients

Scedosporium; Cystic fibrosis; Serological detectionScedosporium; Fibrosi quística; Detecció serològicaScedosporium; Fibrosis quística; Detección serológicaThe detection of Scedosporium/Lomentospora is still based on non-standardized low-sensitivity culture procedures. This fact is particularly worrying in patients with cystic fibrosis (CF), where these fungi are the second most common filamentous fungi isolated, because a poor and delayed diagnosis can worsen the prognosis of the disease. To contribute to the discovery of new diagnostic strategies, a rapid serological dot immunobinding assay (DIA) that allows the detection of serum IgG against Scedosporium/Lomentospora in less than 15 min was developed. A crude protein extract from the conidia and hyphae of Scedosporium boydii was employed as a fungal antigen. The DIA was evaluated using 303 CF serum samples (162 patients) grouped according to the detection of Scedosporium/Lomentospora in the respiratory sample by culture, obtaining a sensitivity and specificity of 90.48% and 79.30%, respectively; positive and negative predictive values of 54.81% and 96.77%, and an efficiency of 81.72%. The clinical factors associated with the results were also studied using a univariate and a multivariate analysis, which showed that Scedosporium/Lomentospora positive sputum, elevated anti-Aspergillus serum IgG and chronic Pseudomonas aeruginosa infection were significantly associated with a positive result in DIA, while Staphylococcus aureus positive sputum showed a negative association. In conclusion, the test developed can offer a complementary, rapid, simple and sensitive method to contribute to the diagnosis of Scedosporium/Lomentospora in patients with CF.This research was funded by the Basque Government, grant numbers IT1362-19 and IT1657-22. L.M-S and M.A have received a predoctoral grant from the Basque Government and L.A-F from the University of the Basque Country (UPV/EHU)

Chemistry in isolation: High CCH/HCO+ line ratio in the AMIGA galaxy CIG 638

Multi-molecule observations towards an increasing variety of galaxies have been showing that the relative molecular abundances are affected by the type of activity. However, these studies are biased towards bright active galaxies, which are typically in interaction. We study the molecular composition of one of the most isolated galaxies in the local Universe where the physical and chemical properties of their molecular clouds have been determined by intrinsic mechanisms. We present 3 mm broad band observations of the galaxy CIG 638, extracted from the AMIGA sample of isolated galaxies. The emission of the J=1-0 transitions of CCH, HCN, HCO+, and HNC are detected. Integrated intensity ratios between these line are compared with similar observations from the literature towards active galaxies including starburst galaxies (SB), active galactic nuclei (AGN), luminous infrared galaxies (LIRG), and GMCs in M33. A significantly high ratio of CCH with respect to HCN, HCO+, and HNC is found towards CIG 638 when compared with all other galaxies where these species have been detected. This points to either an overabundance of CCH or to a relative lack of dense molecular gas as supported by the low HCN/CO ratio, or both. The data suggest that the CIG 638 is naturally a less perturbed galaxy where a lower fraction of dense molecular gas, as well as a more even distribution could explain the measured ratios. In this scenario the dense gas tracers would be naturally dimmer, while the UV enhanced CCH, would be overproduced in a less shielded medium.Comment: Letter accepted for publication in A&

Novel domain architectures and functional determinants in atypical annexins revealed by phylogenomic analysis.

The fundamental cellular role and molecular interactions of annexins in vesicle trafficking and membrane remodeling remain to be further clarified in order to better understand and exploit their contributions to health and disease. We focused on distinctive features of atypical annexins from all domains of life using phylogenomic, molecular systematic and experimental approaches, to extend the current paradigm and better account for annexin diversity of structure, function and mechanistic role in membrane homeostasis. The analysis of gene duplications, organization of domain architectures and profile hidden Markov models of subfamily orthologs defined conserved structural features relevant to molecular interactions and functional divergence of seven family clades ANXA-G. Single domain annexins of bacteria, including cyanobacteria, were frequently coupled to enzymatic units conceivably related to membrane metabolism and remodeling. Multiple ANX domains (up to 20) and various distinct functional domains were observed in unique annexins. Canonical type 2 calcium binding ligands were well-preserved in roughly half of all ANX domains, but alternative structural motifs comprised of 'KGD', cysteine or tryptophan residues were prominently conserved in the same strategic interhelical loops. Selective evolutionary constraint, site-specific location and co-occurrence in all kingdoms identify alternative modes of fundamental binding interactions for annexins

Microcanonical finite-size scaling in specific heat diverging 2nd order phase transitions

A Microcanonical Finite Site Ansatz in terms of quantities measurable in a Finite Lattice allows to extend phenomenological renormalization (the so called quotients method) to the microcanonical ensemble. The Ansatz is tested numerically in two models where the canonical specific-heat diverges at criticality, thus implying Fisher-renormalization of the critical exponents: the 3D ferromagnetic Ising model and the 2D four-states Potts model (where large logarithmic corrections are known to occur in the canonical ensemble). A recently proposed microcanonical cluster method allows to simulate systems as large as L=1024 (Potts) or L=128 (Ising). The quotients method provides extremely accurate determinations of the anomalous dimension and of the (Fisher-renormalized) thermal $\nu$ exponent. While in the Ising model the numerical agreement with our theoretical expectations is impressive, in the Potts case we need to carefully incorporate logarithmic corrections to the microcanonical Ansatz in order to rationalize our data.Comment: 13 pages, 8 figure

Mid-Cycle Changes in Eta Carinae

In late 2006, ground-based photometry of $\eta$ Car plus the Homunculus showed an unexpected decrease in its integrated apparent brightness, an apparent reversal of its long-term brightening. Subsequent HST/WFPC2 photometry of the central star in the near-UV showed that this was not a simple reversal. This multi-wavelength photometry did not support increased extinction by dust as the explanation for the decrease in brightness. A spectrum obtained with GMOS on the Gemini-South telescope, revealed subtle changes mid-way in $\eta$ Car's 5.5 yr spectroscopic cycle 0when compared with HST/STIS spectra at the same phase in the cycle. At mid-cycle the secondary star is 20--30 AU from the primary. We suggest that the spectroscopic changes are consistent with fluctuations in the density and velocity of the primary star's wind, unrelated to the 5.5 yr cycle but possibly related to its latitude-dependent morphology. We also discuss subtle effects that must be taken into account when comparing ground-based and HST/STIS spectra.Comment: 34 pages, 9 Figure

Spin Dynamical Properties of the Layered Perovskite La1.2Sr1.8Mn2O7

Inelastic neutron-scattering measurements were performed on a single crystal of the layered colossal magnetoresistance (CMR) material La1.2Sr1.8Mn2O7 (Tc ~ 120K). We found that the spin wave dispersion is almost perfectly two-dimensional with the in-plane spin stiffness constant D ~ 151meVA. The value is similar to that of similarly doped La1-xSrxMnO3 though its Tc is three times higher, indicating a large renormalization due to low dimensionality. There exist two branches due to a coupling between layers within a double-layer. The out-of-plane coupling is about 30% of the in-plane coupling though the Mn-O bond lengths are similar.Comment: 3 pages, 3 figures J. Phys. Chem. Solids in pres