199 research outputs found

    Effects of chemical preservation on bulk and amino acid isotope ratios of zooplankton, fish, and squid tissues.

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    RationaleIt is imperative to understand how chemical preservation alters tissue isotopic compositions before using historical samples in ecological studies. Specifically, although compound-specific isotope analysis of amino acids (CSIA-AA) is becoming a widely used tool, there is little information on how preservation techniques affect amino acid δ15 N values.MethodsWe evaluated the effects of chemical preservatives on bulk tissue δ13 C and δ15 N and amino acid δ15 N values, measured by gas chromatography/isotope ratio mass spectrometry (GC/IRMS), of (a) tuna (Thunnus albacares) and squid (Dosidicus gigas) muscle tissues that were fixed in formaldehyde and stored in ethanol for 2 years and (b) two copepod species, Calanus pacificus and Eucalanus californicus, which were preserved in formaldehyde for 24-25 years.ResultsTissues in formaldehyde-ethanol had higher bulk δ15 N values (+1.4, D. gigas; +1.6‰, T. albacares), higher δ13 C values for D. gigas (+0.5‰), and lower δ13 C values for T. albacares (-0.8‰) than frozen samples. The bulk δ15 N values from copepods were not different those from frozen samples, although the δ13 C values from both species were lower (-1.0‰ for E. californicus and -2.2‰ for C. pacificus) than those from frozen samples. The mean amino acid δ15 N values from chemically preserved tissues were largely within 1‰ of those of frozen tissues, but the phenylalanine δ15 N values were altered to a larger extent (range: 0.5-4.5‰).ConclusionsThe effects of preservation on bulk δ13 C values were variable, where the direction and magnitude of change varied among taxa. The changes in bulk δ15 N values associated with chemical preservation were mostly minimal, suggesting that storage in formaldehyde or ethanol will not affect the interpretation of δ15 N values used in ecological studies. The preservation effects on amino acid δ15 N values were also mostly minimal, mirroring bulk δ15 N trends, which is promising for future CSIA-AA studies of archived specimens. However, there were substantial differences in phenylalanine and valine δ15 N values, which we speculate resulted from interference in the chromatographic resolution of unknown compounds rather than alteration of tissue isotopic composition due to chemical preservation

    Resilience and stability of a pelagic marine ecosystem

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    The accelerating loss of biodiversity and ecosystem services worldwide has accentuated a long-standing debate on the role of diversity in stabilizing ecological communities and has given rise to a field of research on biodiversity and ecosystem functioning (BEF). Although broad consensus has been reached regarding the positive BEF relationship, a number of important challenges remain unanswered. These primarily concern the underlying mechanisms by which diversity increases resilience and community stability, particularly the relative importance of statistical averaging and functional complementarity. Our understanding of these mechanisms relies heavily on theoretical and experimental studies, yet the degree to which theory adequately explains the dynamics and stability of natural ecosystems is largely unknown, especially in marine ecosystems. Using modelling and a unique 60-year dataset covering multiple trophic levels, we show that the pronounced multi-decadal variability of the Southern California Current System (SCCS) does not represent fundamental changes in ecosystem functioning, but a linear response to key environmental drivers channelled through bottom-up and physical control. Furthermore, we show strong temporal asynchrony between key species or functional groups within multiple trophic levels caused by opposite responses to these drivers. We argue that functional complementarity is the primary mechanism reducing community variability and promoting resilience and stability in the SCCS

    Ecological Transitions in a Coastal Upwelling Ecosystem

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    The southern California Current Ecosystem (CCE) is a dynamic eastern boundary current ecosystem that is forced by ocean-atmosphere variability on interannual, multidecadal, and long-term secular time scales. Recent evidence suggests that apparent abrupt transitions in ecosystem conditions reflect linear tracking of the physical environment rather than oscillations between alternative preferred states. A space-for-time exchange is one approach that permits use of natural spatial variability in the CCE to develop a mechanistic understanding needed to project future temporal changes. The role of (sub)mesoscale frontal systems in altering rates of nutrient transport, primary and secondary production, export fluxes, and the rates of encounters between predators and prey is an issue central to this pelagic ecosystem and its future trajectory because the occurrence of such frontal features is increasing

    Relative exposure to microplastics and prey for a pelagic forage fish

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    © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Chavarry, J. M., Law, K. L., Barton, A. D., Bowlin, N. M., Ohman, M. D., & Choy, C. A. Relative exposure to microplastics and prey for a pelagic forage fish. Environmental Research Letters, 17(6), (2022): 064038, https://doi.org/10.1088/1748-9326/ac7060.In the global ocean, more than 380 species are known to ingest microplastics (plastic particles less than 5 mm in size), including mid-trophic forage fishes central to pelagic food webs. Trophic pathways that bioaccumulate microplastics in marine food webs remain unclear. We assess the potential for the trophic transfer of microplastics through forage fishes, which are prey for diverse predators including commercial and protected species. Here, we quantify Northern Anchovy (Engraulis mordax) exposure to microplastics relative to their natural zooplankton prey, across their vertical habitat. Microplastic and zooplankton samples were collected from the California Current Ecosystem in 2006 and 2007. We estimated the abundance of microplastics beyond the sampled size range but within anchovy feeding size ranges using global microplastic size distributions. Depth-integrated microplastics (0–30 m depth) were estimated using a depth decay model, accounting for the effects of wind-driven vertical mixing on buoyant microplastics. In this coastal upwelling biome, the median relative exposure for an anchovy that consumed prey 0.287–5 mm in size was 1 microplastic particle for every 3399 zooplankton individuals. Microplastic exposure varied, peaking within offshore habitats, during the winter, and during the day. Maximum exposure to microplastic particles relative to zooplankton prey was higher for juvenile (1:23) than adult (1:33) anchovy due to growth-associated differences in anchovy feeding. Overall, microplastic particles constituted fewer than 5% of prey-sized items available to anchovy. Microplastic exposure is likely to increase for forage fishes in the global ocean alongside declines in primary productivity, and with increased water column stratification and microplastic pollution.This work originated from the Plastic Awareness Global Initiative (PAGI) international workshop, hosted by the Center for Marine Biodiversity and Conservation (CMBC) at Scripps Institution of Oceanography at the University of California San Diego in 2018, with support from Igor Korneitchouk and the Wilsdorf Mettler Future Foundation. We thank the workshop participants for early discussions and a collaborative meeting space. We thank Kelly Lance for her illustration contributions, and the SIO Communications Office for their support. We thank Miriam Doyle and Ryan Rykaczewski for their assistance in data acquisition, and we thank Penny Dockry and Stuart Sandin of CMBC for administrative and logistical support. Julia Chavarry was supported by the San Diego Fellowship. This paper is a contribution from the California Current Ecosystem Long Term Ecological Research site, supported by the National Science Foundation

    Epipelagic and mesopelagic fishes in the southern California Current System: Ecological interactions and oceanographic influences on their abundance

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    We use zooplankton and ichthyoplankton data from the~60-year CalCOFI time series to examine relationships of mesopelagic (i.e. midwater) fishes in the California Current System with midwater predators, potential competitors (epipelagic planktivorous fishes) and zooplankton prey, within the context of local and basin-scale oceanography. Equilibrium-based near-steady state models and the "wasp-waist" paradigm for eastern boundary currents predict tightly-coupled trophic interactions, with negative correlations between the abundance of planktivorous competitors and between dominant planktivores and their prey. Testing these hypotheses with the CalCOFI time series, we found them to be generally invalid. Potential competitors within the mesopelagic community (planktivorous vertical migrators (VMs) and non-migrators (NMs)) were highly positively correlated, as were these groups with the mesopelagic piscivores (e.g. dragonfishes) that prey on them. In addition, the abundance of VMs was mostly positively correlated with that of epipelagic planktivores, such as anchovy, mackerels and hake. The VMs and epipelagic planktivores were negatively correlated with key potential planktonic prey groups, indicating a lack of bottom-up forcing. However, neither do these negative correlations appear to signify top-down forcing, since they seem to be mediated through correlations with key environmental drivers, such as the Pacific Decadal Oscillation (PDO), sea surface temperature, and the relative strength of the California Current. We suggest that the web of correlations linking key meso-and epipelagic planktivores, their predators and prey is mediated through common links with basin-scale oceanographic drivers, such as the PDO and ENSO cycles. Thus, the abundance of mesopelagic fishes in the California Current is closely tied to variation in the oxygen minimum zone, whose dynamics have been linked to the PDO. The PDO and other drivers are also linked to the transport of the California Current System, which influences the abundance of many dominant taxa off southern California that have broad biogeographic distributions linked to water masses that extend to the north (Transition Zone/sub-Arctic faunas) or the south (tropical/subtropical faunas)

    Climate-mediated changes in marine ecosystem regulation during El Niño

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    The degree to which ecosystems are regulated through bottom-up, top-down, or direct physical processes represents a long-standing issue in ecology, with important consequences for resource management and conservation. In marine ecosystems, the role of bottom-up and top-down forcing has been shown to vary over spatio-temporal scales, often linked to highly variable and heterogeneously distributed environmental conditions. Ecosystem dynamics in the Northeast Pacific have been suggested to be predominately bottom-up regulated. However, it remains unknown to what extent top-down regulation occurs, or whether the relative importance of bottom-up and top-down forcing may shift in response to climate change. In this study, we investigate the effects and relative importance of bottom-up, top-down, and physical forcing during changing climate conditions on ecosystem regulation in the Southern California Current System (SCCS) using a generalized food web model. This statistical approach is based on nonlinear threshold models and a long-term data set (~60 years) covering multiple trophic levels from phytoplankton to predatory fish. We found bottom-up control to be the primary mode of ecosystem regulation. However, our results also demonstrate an alternative mode of regulation represented by interacting bottom-up and top-down forcing, analogous to wasp-waist dynamics, but occurring across multiple trophic levels and only during periods of reduced bottom-up forcing (i.e., weak upwelling, low nutrient concentrations, and primary production). The shifts in ecosystem regulation are caused by changes in ocean-atmosphere forcing and triggered by highly variable climate conditions associated with El Niño. Furthermore, we show that biota respond differently to major El Niño events during positive or negative phases of the Pacific Decadal Oscillation (PDO), as well as highlight potential concerns for marine and fisheries management by demonstrating increased sensitivity of pelagic fish to exploitation during El Niño

    Autonomous Ocean Measurements in the California Current Ecosystem

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    Event-scale phenomena, of limited temporal duration or restricted spatial extent, often play a disproportionately large role in ecological processes occurring in the ocean water column. Nutrient and gas fluxes, upwelling and downwelling, transport of biogeochemically important elements, predator-prey interactions, and other processes may be markedly influenced by such events, which are inadequately resolved from infrequent ship surveys. The advent of autonomous instrumentation, including underwater gliders, profiling floats, surface drifters, enhanced moorings, coastal high-frequency radars, and satellite remote sensing, now provides the capability to resolve such phenomena and assess their role in structuring pelagic ecosystems. These methods are especially valuable when integrated together, and with shipboard calibration measurements and experimental programs
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