69 research outputs found
Palms, peccaries and perturbations: widespread effects of small-scale disturbance in tropical forests
<p>Abstract</p> <p>Background</p> <p>Disturbance is an important process structuring ecosystems worldwide and has long been thought to be a significant driver of diversity and dynamics. In forests, most studies of disturbance have focused on large-scale disturbance such as hurricanes or tree-falls. However, smaller sub-canopy disturbances could also have significant impacts on community structure. One such sub-canopy disturbance in tropical forests is abscising leaves of large arborescent palm (Arececeae) trees. These leaves can weigh up to 15 kg and cause physical damage and mortality to juvenile plants. Previous studies examining this question suffered from the use of static data at small spatial scales. Here we use data from a large permanent forest plot combined with dynamic data on the survival and growth of > 66,000 individuals over a seven-year period to address whether falling palm fronds do impact neighboring seedling and sapling communities, or whether there is an interaction between the palms and peccaries rooting for fallen palm fruit in the same area as falling leaves. We tested the wider generalisation of these hypotheses by comparing seedling and sapling survival under fruiting and non-fruiting trees in another family, the Myristicaceae.</p> <p>Results</p> <p>We found a spatially-restricted but significant effect of large arborescent fruiting palms on the spatial structure, population dynamics and species diversity of neighbouring sapling and seedling communities. However, these effects were not found around slightly smaller non-fruiting palm trees, suggesting it is seed predators such as peccaries rather than falling leaves that impact on the communities around palm trees. Conversely, this hypothesis was not supported in data from other edible species, such as those in the family Myristicaceae.</p> <p>Conclusions</p> <p>Given the abundance of arborescent palm trees in Amazonian forests, it is reasonable to conclude that their presence does have a significant, if spatially-restricted, impact on juvenile plants, most likely on the survival and growth of seedlings and saplings damaged by foraging peccaries. Given the abundance of fruit produced by each palm, the widespread effects of these small-scale disturbances appear, over long time-scales, to cause directional changes in community structure at larger scales.</p
Implications of sudden oak death for wildland fire management
Human activities and climate change have altered historical disturbance regimes, introduced disturbances, and encouraged novel interactions between multiple disturbances. Ecosystems and the species that comprise them may be poorly equipped to withstand or recover from these altered disturbance regimes. In the fire-prone coastal forests of California and Oregon, sudden oak death (SOD), caused by the pathogen Phytophthora ramorum, is an emerging, non-native plant disease that causes widespread tree mortality and associated implications for fire regimes. Disease-related tree mortality alters fuel loads, with patterns of fuel accumulation varying depending on stand composition, disease severity, and time since pathogen invasion. Simulations and observational studies suggest these altered fuel profiles can impact subsequent fire behavior, and the extent of this interaction may depend on the severity and timing of disease impacts. Initial tree death can elevate the risk of crown ignition, while latter stages can increase surface fuel loading and have been linked to increased fire severity in wildfires. Further, disease history can also influence fire severity with cascading effects leading to unexpected increases in mortality of non-susceptible tree species and changes in nutrient cycling. The longer-term impacts of SOD-fire interactions on system resilience and recovery remain to be seen, but increased fire severity, changed stand structure, and altered biogeochemical cycling may have important consequences for post-fire regeneration and future ecosystem function. Fuels management strategies that diminish crown fire hazards at early stages and mitigate surface fuel hazards at later stages offer some promise, but have yet to be tested in large landscapes. Given SOD-wildfire interactions, further integration of disease- and fire-related management plans will be essential to minimizing impacts of these compounded disturbances
Exploring the links between secondary metabolites and leaf spectral reflectance in a diverse genus of Amazonian trees
Plant defense chemistry is often hypothesized to drive ecological and evolutionary success in diverse tropical forests, yet detailed characterizations of plant secondary metabolites in tropical plants are logistically challenging. Here, we explore a new integrative approach that combines visible-to-shortwave infrared (VSWIR) spectral reflectance data with detailed plant metabolomics data from 19 Protium (Burseraceae) tree species. Building on the discovery that different Protium species have unique chemistries yet share many secondary metabolites, we devised a method to test for associations between metabolites and VSWIR spectral data. Given species-level variation in metabolite abundance, we correlated the concentration of particular chemicals with the reflectance of the spectral bands in a wavelength band per secondary metabolite matrix. We included 45 metabolites that were shared by at least 5 Protium species and correlated their per-species foliar abundances against each one of 210 wavelength bands of field-measured VSWIR spectra. Finally, we tested whether classes of similar metabolites showed similar relationships with spectral patterns. We found that many secondary metabolites yielded strong correlations with VSWIR spectra of Protium. Furthermore, important Protium metabolite classes such as procyanidins (condensed tannins) and phytosterols were grouped together in a hierarchical clustering analysis (Ward’s algorithm), confirming similarity in their associations with plant spectral patterns. We also found a significant correlation in the phenolics content between juvenile and canopy trees of the same species, suggesting that species-level variation in defense chemistry is consistent across life stages and geographic distribution. We conclude that the integration of spectral and metabolic approaches could represent a powerful and economical method to characterize important aspects of tropical plant defense chemistry
Seasonality of reproduction in an ever-wet lowland tropical forest in Amazonian Ecuador
We thank Pablo Alvia, Alvaro Pérez, Zornitza Aguilar, Paola Barriga, Matt Priest, Caroline Whitefoord, and Gorky Villa for assistance in collecting data or identifying species; Elina Gomez for entry of trap data; Hugo Navarrete, Katya Romoleroux and the QCA herbarium staff, and David Lasso and the ECY staff for help with logistics and needed permitting; Rick Condit, Elizabeth Losos, Robin Foster, and Henrik Balslev for initial encouragement to work within the Yasuní Forest Dynamics Plot; Hugo Romero for initially summarizing the YFDP and SSP weather data sets; Pablo Jarrin for setting up the TEAM weather station, and David Lasso and Carlos Padilla for maintaining that equipment and making the data available; and the Ecuadorian Ministerio del Ambiente for permission to work in Yasuní National Park [No 014-2019-IC-PNY-DPAO/AVS, No 012-2018-IC-PNY593-DPAO/AVS, No 008-2017-IC-PNY-DPAO/AVS, No 012-2016-IC-FAU-FLO-DPAO-PNY, No 594-014-2015-FLO-MAE-DPAO-PNY, and earlier permits]. The Forest Dynamics Plot of Yasuní National Park has been made possible through the generous support of the Pontifical Catholic University of Ecuador (PUCE) funds of donaciones del impuesto a la renta, the Government of Ecuador, the US National Science Foundation, the Andrew W. Mellon Foundation, the Smithsonian Tropical Research Institute, and the University of Aarhus of Denmark. The phenology project began while NCG was at the Natural History Museum, London, with funding (2000–2004) from the Department of Botany (NHM), the Andrew W. Mellon Foundation, British Airways, and the Natural Environment Research Council (GR9/04037). It continued with NCG at Southern Illinois University Carbondale (2005–2023). We thank the Center for Tropical Forest Science for transitional funding (2006–2008, 2017–2018) and the National Science Foundation LTREB program for long-term funding (2006–2020; DEB-0614525, DEB-1122634, DEB-1754632, DEB-1754668).Peer reviewedPublisher PD
The Anisotropic Spatial Distribution of Hypervelocity Stars
We study the distribution of angular positions and angular separations of
unbound hypervelocity stars (HVSs). HVSs are spatially anisotropic at the
3-sigma level. The spatial anisotropy is significant in Galactic longitude, not
in latitude, and the inclusion of lower velocity, possibly bound HVSs reduces
the significance of the anisotropy. We discuss how the observed distribution of
HVSs may be linked to their origin. In the future, measuring the distribution
of HVSs in the southern sky will provide additional constraints on the spatial
anisotropy and the origin of HVSs.Comment: 4 pages, accepted to ApJ Letter
Locus for severity implicates CNS resilience in progression of multiple sclerosis
Multiple sclerosis (MS) is an autoimmune disease of the central nervous system (CNS) that results in significant neurodegeneration in the majority of those affected and is a common cause of chronic neurological disability in young adults(1,2). Here, to provide insight into the potential mechanisms involved in progression, we conducted a genome-wide association study of the age-related MS severity score in 12,584 cases and replicated our findings in a further 9,805 cases. We identified a significant association with rs10191329 in the DYSF-ZNF638 locus, the risk allele of which is associated with a shortening in the median time to requiring a walking aid of a median of 3.7 years in homozygous carriers and with increased brainstem and cortical pathology in brain tissue. We also identified suggestive association with rs149097173 in the DNM3-PIGC locus and significant heritability enrichment in CNS tissues. Mendelian randomization analyses suggested a potential protective role for higher educational attainment. In contrast to immune-driven susceptibility(3), these findings suggest a key role for CNS resilience and potentially neurocognitive reserve in determining outcome in MS
Researching COVID to Enhance Recovery (RECOVER) Adult Study Protocol: Rationale, Objectives, and Design
IMPORTANCE: SARS-CoV-2 infection can result in ongoing, relapsing, or new symptoms or other health effects after the acute phase of infection; termed post-acute sequelae of SARS-CoV-2 infection (PASC), or long COVID. The characteristics, prevalence, trajectory and mechanisms of PASC are ill-defined. The objectives of the Researching COVID to Enhance Recovery (RECOVER) Multi-site Observational Study of PASC in Adults (RECOVER-Adult) are to: (1) characterize PASC prevalence; (2) characterize the symptoms, organ dysfunction, natural history, and distinct phenotypes of PASC; (3) identify demographic, social and clinical risk factors for PASC onset and recovery; and (4) define the biological mechanisms underlying PASC pathogenesis.
METHODS: RECOVER-Adult is a combined prospective/retrospective cohort currently planned to enroll 14,880 adults aged ≥18 years. Eligible participants either must meet WHO criteria for suspected, probable, or confirmed infection; or must have evidence of no prior infection. Recruitment occurs at 86 sites in 33 U.S. states, Washington, DC and Puerto Rico, via facility- and community-based outreach. Participants complete quarterly questionnaires about symptoms, social determinants, vaccination status, and interim SARS-CoV-2 infections. In addition, participants contribute biospecimens and undergo physical and laboratory examinations at approximately 0, 90 and 180 days from infection or negative test date, and yearly thereafter. Some participants undergo additional testing based on specific criteria or random sampling. Patient representatives provide input on all study processes. The primary study outcome is onset of PASC, measured by signs and symptoms. A paradigm for identifying PASC cases will be defined and updated using supervised and unsupervised learning approaches with cross-validation. Logistic regression and proportional hazards regression will be conducted to investigate associations between risk factors, onset, and resolution of PASC symptoms.
DISCUSSION: RECOVER-Adult is the first national, prospective, longitudinal cohort of PASC among US adults. Results of this study are intended to inform public health, spur clinical trials, and expand treatment options
Development of a Definition of Postacute Sequelae of SARS-CoV-2 Infection
IMPORTANCE: SARS-CoV-2 infection is associated with persistent, relapsing, or new symptoms or other health effects occurring after acute infection, termed postacute sequelae of SARS-CoV-2 infection (PASC), also known as long COVID. Characterizing PASC requires analysis of prospectively and uniformly collected data from diverse uninfected and infected individuals.
OBJECTIVE: To develop a definition of PASC using self-reported symptoms and describe PASC frequencies across cohorts, vaccination status, and number of infections.
DESIGN, SETTING, AND PARTICIPANTS: Prospective observational cohort study of adults with and without SARS-CoV-2 infection at 85 enrolling sites (hospitals, health centers, community organizations) located in 33 states plus Washington, DC, and Puerto Rico. Participants who were enrolled in the RECOVER adult cohort before April 10, 2023, completed a symptom survey 6 months or more after acute symptom onset or test date. Selection included population-based, volunteer, and convenience sampling.
EXPOSURE: SARS-CoV-2 infection.
MAIN OUTCOMES AND MEASURES: PASC and 44 participant-reported symptoms (with severity thresholds).
RESULTS: A total of 9764 participants (89% SARS-CoV-2 infected; 71% female; 16% Hispanic/Latino; 15% non-Hispanic Black; median age, 47 years [IQR, 35-60]) met selection criteria. Adjusted odds ratios were 1.5 or greater (infected vs uninfected participants) for 37 symptoms. Symptoms contributing to PASC score included postexertional malaise, fatigue, brain fog, dizziness, gastrointestinal symptoms, palpitations, changes in sexual desire or capacity, loss of or change in smell or taste, thirst, chronic cough, chest pain, and abnormal movements. Among 2231 participants first infected on or after December 1, 2021, and enrolled within 30 days of infection, 224 (10% [95% CI, 8.8%-11%]) were PASC positive at 6 months.
CONCLUSIONS AND RELEVANCE: A definition of PASC was developed based on symptoms in a prospective cohort study. As a first step to providing a framework for other investigations, iterative refinement that further incorporates other clinical features is needed to support actionable definitions of PASC
- …