Crucial Physical Dependencies of the Core-Collapse Supernova Mechanism

We explore with self-consistent 2D F{\sc{ornax}} simulations the dependence of the outcome of collapse on many-body corrections to neutrino-nucleon cross sections, the nucleon-nucleon bremsstrahlung rate, electron capture on heavy nuclei, pre-collapse seed perturbations, and inelastic neutrino-electron and neutrino-nucleon scattering. Importantly, proximity to criticality amplifies the role of even small changes in the neutrino-matter couplings, and such changes can together add to produce outsized effects. When close to the critical condition the cumulative result of a few small effects (including seeds) that individually have only modest consequence can convert an anemic into a robust explosion, or even a dud into a blast. Such sensitivity is not seen in one dimension and may explain the apparent heterogeneity in the outcomes of detailed simulations performed internationally. A natural conclusion is that the different groups collectively are closer to a realistic understanding of the mechanism of core-collapse supernovae than might have seemed apparent.Comment: 25 pages; 10 figure

Exploration and collection of rare helianthus species from Southeastern United States

A 10-day trip, encompassing 4600 km in the southeastern USA states of Tennessee, North Carolina, South Carolina, Georgia and Alabama, was made in October, 2003. Our primary objective was to locate populations of Helianthus eggertii, then on the USDI, Fish and Wildlife Service Threatened and Endangered Species list, and H. verticillatus, a candidate for endangered species status. Helianthus eggertii has since been de-listed (August 2005). An additional objective was to collect seeds of H. porteri, a species reclassified from Viguiera porteri, which is endemic to granite rock outcrops in Georgia. We collected seeds from 27 populations of the above three species plus three additional species, H. angustifolius, H. atrorubens, and H. smithii. Seed was deposited with the USDA-ARS North Central Regional Plant Introduction Station at Ames, Iowa (NCRPIS) from which 24 of the 27 collections are available for distribution. The three 'target' species were represented by 13 collections of H. eggertii, eight of H. porteri, and two of H. verticillatus; none of the three species were previously available from the NCRPIS sunflower collection. The availability of seed of these three species will allow researchers around the world the opportunity to investigate the potential of these wild Helianthus species to contribute useful traits to cultivated sunflower. Complete collection data has been loaded Into the USDA-ARS Germplasm Resource Information Network (GRIN), and is available on the internet (www.ars-grin.gov)

A new integrated genetic linkage map of the soybean

A total of 391 simple sequence repeat (SSR) markers designed from genomic DNA libraries, 24 derived from existing GenBank genes or ESTs, and five derived from bacterial artificial chromosome (BAC) end sequences were developed. In contrast to SSRs derived from EST sequences, those derived from genomic libraries were a superior source of polymorphic markers, given that the mean number of tandem repeats in the former was significantly less than that of the latter (P\u3c0.01). The 420 newly developed SSRs were mapped in one or more of five soybean mapping populations: ‘Minsoy’ × ‘Noir 1’, ‘Minsoy’ × ‘Archer’, ‘Archer’ × ‘Noir 1’, ‘Clark’ × ‘Harosoy’, and A81-356022 × PI468916. The JoinMap software package was used to combine the five maps into an integrated genetic map spanning 2,523.6 cM of Kosambi map distance across 20 linkage groups that contained 1,849 markers, including 1,015 SSRs, 709 RFLPs, 73 RAPDs, 24 classical traits, six AFLPs, ten isozymes, and 12 others. The number of new SSR markers added to each linkage group ranged from 12 to 29. In the integrated map, the ratio of SSR marker number to linkage group map distance did not differ among 18 of the 20 linkage groups; however, the SSRs were not uniformly spaced over a linkage group, clusters of SSRs with very limited recombination were frequently present. These clusters of SSRs may be indicative of gene-rich regions of soybean, as has been suggested by a number of recent studies, indicating the significant association of genes and SSRs. Development of SSR markers from map-referenced BAC clones was a very effective means of targeting markers to marker-scarce positions in the genome