51 research outputs found
A. Global distribution of sequenced <i>H</i>. <i>pylori</i> strains from different populations B. phylogenetic comparison based on seven house-keeping genes (Left) and core genomes (Right).
<p>A. Global distribution of sequenced <i>H</i>. <i>pylori</i> strains from different populations B. phylogenetic comparison based on seven house-keeping genes (Left) and core genomes (Right).</p
Gene contents of the predicted phage YN4β84P.
<p>Gene contents of the predicted phage YN4β84P.</p
Neighbor-joining tree based on the sequence diversity of <i>cagA</i> (Left) and <i>cagPAI</i> (Right).
<p>YN4β84 is highlighted in red.</p
a. Subsystem distribution statistics of <i>Helicobacter pylori</i> strain YN4β84 generated by the rapid annotation using a subsystem technology server. b. Subsystem distribution statistics of <i>Helicobacter pylori</i> strain YN1β91 generated by the rapid annotation using a subsystem technology server.
<p>a. Subsystem distribution statistics of <i>Helicobacter pylori</i> strain YN4β84 generated by the rapid annotation using a subsystem technology server. b. Subsystem distribution statistics of <i>Helicobacter pylori</i> strain YN1β91 generated by the rapid annotation using a subsystem technology server.</p
Genomic features and backgrounds of the 47 <i>H</i>. <i>pylori</i> strains used in this study
<p>Genomic features and backgrounds of the 47 <i>H</i>. <i>pylori</i> strains used in this study</p
Global overview of genomic diversity of YN4β84 and YN1β91 with other 46 <i>H</i>. <i>pylori</i> genome sequences.
<p>The four regions with most divergence were labeled with brown arcs along the chromosome.</p
Global alignment of YN4β84 and YN1β91.
<p>The black arrows above YN4β84 show the insertion of YN4β84P and its flanking gene fragments.</p
Map of 18 CPS loci.
<p>The same color module in different strains means that the sequences in this region are similar. Blank regions indicate a unique region in a sequence. The name of the sequences is made up of the strain ID and serotype. The comparison was made using Mauve 2.4.0 software.</p
Comparison of sequences of CPS loci of <i>C</i>. <i>jejuni</i> strains.
<p>(A) Comparison of the sequences of the CPS loci of <i>C</i>. <i>jejuni</i> HS9 (strain BJ-CJD63), HS37 (strain HB-CJGB-LL) and HS31 (strain BJ-CJD39); (B) comparison of the CPS loci of <i>C</i>. <i>jejuni</i> HS12 (strain BJ-CJD70) and a strain of HS42 (strain ATCC 43461); (C) comparison of the CPS loci of <i>C</i>. <i>jejuni</i> HS21 (strain JL-CJHLIU1-1), the HS15 type strain (strain ATCC 43442), and an HS8/17 strain (strain 43444). Red bars represent identical regions between loci.</p
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