Forward Stochastic Reachability Analysis for Uncontrolled Linear Systems using Fourier Transforms

We propose a scalable method for forward stochastic reachability analysis for uncontrolled linear systems with affine disturbance. Our method uses Fourier transforms to efficiently compute the forward stochastic reach probability measure (density) and the forward stochastic reach set. This method is applicable to systems with bounded or unbounded disturbance sets. We also examine the convexity properties of the forward stochastic reach set and its probability density. Motivated by the problem of a robot attempting to capture a stochastically moving, non-adversarial target, we demonstrate our method on two simple examples. Where traditional approaches provide approximations, our method provides exact analytical expressions for the densities and probability of capture.Comment: V3: HSCC 2017 (camera-ready copy), DOI updated, minor changes | V2: Review comments included | V1: 10 pages, 12 figure

Biological and physical controls on the flux and characteristics of sinking particles on the Northwest Atlantic margin

Author Posting. © American Geophysical Union, 2017. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 122 (2017): 4539–4553, doi:10.1002/2016JC012549.Biogenic matter characteristics and radiocarbon contents of organic carbon (OC) were examined on sinking particle samples intercepted at three nominal depths of 1000 m, 2000 m, and 3000 m (∼50 m above the seafloor) during a 3 year sediment trap program on the New England slope in the Northwest Atlantic. We have sought to characterize the sources of sinking particles in the context of vertical export of biogenic particles from the overlying water column and lateral supply of resuspended sediment particles from adjacent margin sediments. High aluminum (Al) abundances and low OC radiocarbon contents indicated contributions from resuspended sediment which was greatest at 3000 m but also significant at shallower depths. The benthic source (i.e., laterally supplied resuspended sediment) of opal appears negligible based on the absence of a correlation with Al fluxes. In comparison, CaCO3 fluxes at 3000 m showed a positive correlation with Al fluxes. Benthic sources accounted for 42 ∼ 63% of the sinking particle flux based on radiocarbon mass balance and the relationship between Al flux and CaCO3 flux. Episodic pulses of Al at 3000 m were significantly correlated with the near-bottom current at a nearby hydrographic mooring site, implying the importance of current variability in lateral particle transport. However, Al fluxes at 1000 m and 2000 m were coherent but differed from those at 3000 m, implying more than one mode of lateral supply of particles in the water column.NSF Ocean Sciences Chemical Oceanography program Grant Numbers: OCE-0425677, OCE-0851350; Ocean and Climate Change Institute of WHOI2017-12-0

Lithogenic particle transport trajectories on the Northwest Atlantic Margin

Author Posting. © American Geophysical Union, 2021. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 126(1), (2021): e2020JC016802, https://doi.org/10.1029/2020JC016802.The neodymium isotopic composition of the detrital (lithogenic) fraction (εNd‐detrital) of surface sediments and sinking particles was examined to constrain transport trajectories associated with hemipelagic sedimentation on the northwest Atlantic margin. The provenance of resuspended sediments and modes of lateral transport in the water column were of particular interest given the energetic hydrodynamic regime that sustains bottom and intermediate nepheloid layers over the margin. A large across‐margin gradient of ∼5 εNd units was observed for surface sediments, implying strong contrasts in sediment provenance, with εNd‐detrital values on the lower slope similar to those of “upstream regions” (Scotian margin) under the influence of the Deep Western Boundary Current (DWBC). Sinking particles collected at three depths at a site (total water depth, ∼3,000 m) on the New England margin within the core of the DWBC exhibited a similarly large range in εNd‐detrital values. The εNd‐detrital values of particles intercepted at intermediate water depths (1,000 and 2,000 m) were similar to each other but significantly higher than those at 3,000 m (∼50 m above the seafloor). These observations suggest that lithogenic material accumulating in the upper two traps was primarily advected in intermediate nepheloid layers emanating from the adjacent shelf, while that at 3,000 m is strongly influenced by sediment resuspension and along‐margin, southward lateral transport within the bottom nepheloid layer via entrainment in the DWBC. Our results highlight the importance of both along‐ and across‐margin sediment transport as vectors for lithogenic material and associated organic carbon transport.This research was funded by the NSF Ocean Sciences Chemical Oceanography program (OCE‐0425677; OCE‐0851350). JH was partly supported by the National Research Foundation of Korea (NRF) grant funded by the Korean Government (2020R1A2C1008378).2021-06-0

HIV infection of non-dividing cells: a divisive problem

Understanding how lentiviruses can infect terminally differentiated, non-dividing cells has proven a very complex and controversial problem. It is, however, a problem worth investigating, for it is central to HIV-1 transmission and AIDS pathogenesis. Here I shall attempt to summarise what is our current understanding for HIV-1 infection of non-dividing cells. In some cases I shall also attempt to make sense of controversies in the field and advance one or two modest proposals

Preservation of iron(II) by carbon-rich matrices in a hydrothermal plume

Hydrothermal venting associated with mid-ocean ridge volcanism is globally widespread. This venting is responsible for a dissolved iron flux to the ocean that is approximately equal to that associated with continental riverine runoff. For hydrothermal fluxes, it has long been assumed that most of the iron entering the oceans is precipitated in inorganic forms. However, the possibility of globally significant fluxes of iron escaping these mass precipitation events and entering open-ocean cycles is now being debated, and two recent studies suggest that dissolved organic ligands might influence the fate of hydrothermally vented metals. Here we present spectromicroscopic measurements of iron and carbon in hydrothermal plume particles at the East Pacific Rise mid-ocean ridge. We show that organic carbon-rich matrices, containing evenly dispersed iron(II)-rich materials, are pervasive in hydrothermal plume particles. The absence of discrete iron(II) particles suggests that the carbon and iron associate through sorption or complexation. We suggest that these carbon matrices stabilize iron(II) released from hydrothermal vents in the region, preventing its oxidation and/or precipitation as insoluble minerals. Our findings have implications for deep-sea biogeochemical cycling of iron, a widely recognized limiting nutrient in the oceans

Transforming Growth Factor beta2 inhibition of Hepatocyte Growth Factor-induced endothelial proliferation and migration

Angiogenesis is a highly controlled event which depends on the proper equilibrium of activators and inhibitors present within the microenvironment. Hepatocyte Growth Factor (HGF) activates migration and proliferation of endothelial cells and is angiogenic, acting through the tyrosine kinase receptor encoded by the Met protooncogene. To get insights into the molecular mechanisms involved in HGF-induced angiogenesis, we searched for cDNAs differentially expressed in human endothelial cells exposed to HGF, a potent angiogenic factor. We found that HGF-treated endothelial cells upregulated the expression of Transforming Growth Factor (TGF) \u3b22. To understand the significance of this finding, we cultured endothelial cells with HGF and TGF \u3b22 simultaneously. We found that TGF \u3b22 impairs HGF-dependent proliferative and migratory responses. TGF \u3b22 did not prevent the tyrosine phosphorylation of Met, but it inhibited some signalling pathways activated by HGF. We show that endothelial proliferation induced by HGF required the activation of the MAPK cascade, while HGF-induced endothelial migration was dependent on the tyrosine phosphorylation of Src. Indeed, TGF \u3b22 inhibited HGF effects because it prevented HGF-induced MAP kinase activation and tyrosine phosphorylation of Src. We suggest that the induction of TGF \u3b22 by HGF in endothelial cells may represent a physiologic mechanism to counterbalance HGF angiogenic activity

Modulation of WHSC2 expression in human endothelial cells

AbstractWHSC2, a novel gene recently isolated within the critical region of Wolf–Hirschhorn syndrome, is expressed in endothelial cells. WHSC2 is downregulated by HIV-1 Tat, whereas it is not modulated by angiogenic and pro-differentiative molecules. WHSC2 encodes a basic polypeptide of 528 amino acids. The in vitro translated protein shows a molecular weight of 57 kDa. WHSC2 has two nuclear translocation sequences which actively mediate its transport to the nucleus, as shown in whsc2-GFP-transfected NIH-3T3. We also found a helix-loop-helix (HLH) motif in region 130–185. Since members of the HLH family control differentiation and cell cycle progression, we hypothesize that WHSC2 may function as a transcriptional repressor

Development of a New Braking System for a Horizontal Sled Used in Crash Tests with an Imposed Deceleration

In crashworthiness, experimental tests with an imposed deceleration are customary. At LAST Crash Labs, Politecnico di Milano, Italia, an oleopneumatic braking system is currently used to arrest with a prescribed deceleration profile a trolley running on a horizontal sled. Unfortunately, this system is rather costly, difficult to regulate and complicated time profiles are out of reach. In effort to overcome these drawbacks, a different braking system is under development. The basic idea is to arrest the trolley by means of a number of irons bars (here called deceleration beams) with different lengths and placed at different distances the ones from the others. The concept is rather simple, but difficult to realise. Core of the system is the constraint system meant to slow down the trolley by deforming the deceleration beams. Static and dynamic tests initially carried out to develop the new braking system were also used to validate a numerical model that was eventually used to perfect the braking system. A numerical scheme was worked out so that, fixed an arbitrary deceleration profile, it were possible to decide the test set-up that guarantees a deceleration close to the fixed one

Resource aware multifidelity active learning for efficient optimization

Traditional methods for black box optimization require a considerable number of evaluations of the objective function. This can be time consuming, impractical, and unfeasible for many applications in aerospace science and engineering, which rely on accurate representations and expensive models to evaluate. Bayesian Optimization (BO) methods search for the global optimum by progressively (actively) learning a surrogate model of the objective function along the search path. Bayesian optimization can be accelerated through multifidelity approaches which leverage multiple black-box approximations of the objective functions that are computationally cheaper to evaluate, but still provide relevant information to the search task. Further computational benefits are offered by the availability of parallel and distributed computing architectures whose optimal usage is an open opportunity within the context of active learning. This paper introduces the Resource Aware Active Learning (RAAL) algorithm, a multifidelity Bayesian scheme to accelerate the optimization of black box functions. At each optimization step, the RAAL procedure computes the set of best sample locations and the associated fidelity sources that maximize the information gain to acquire during the parallel/distributed evaluation of the objective function, while accounting for the limited computational budget. The scheme is demonstrated for a variety of benchmark problems and results are discussed for both single fidelity and multifidelity settings. In particular, we observe that the RAAL strategy optimally seeds multiple points at each iteration, which allows for a major speed up of the optimization task