196 research outputs found
Quantum Circuit Simulation by SGEMM Emulation on Tensor Cores and Automatic Precision Selection
Quantum circuit simulation provides the foundation for the development of
quantum algorithms and the verification of quantum supremacy. Among the various
methods for quantum circuit simulation, tensor network contraction has been
increasing in popularity due to its ability to simulate a larger number of
qubits. During tensor contraction, the input tensors are reshaped to matrices
and computed by a GEMM operation, where these GEMM operations could reach up to
90\% of the total calculation time. GEMM throughput can be improved by
utilizing mixed-precision hardware such as Tensor Cores, but straightforward
implementation results in insufficient fidelity for deep and large quantum
circuits. Prior work has demonstrated that compensated summation with special
care of the rounding mode can fully recover the FP32 precision of SGEMM even
when using TF32 or FP16 Tensor Cores. The exponent range is a critical issue
when applying such techniques to quantum circuit simulation. While TF32
supports almost the same exponent range as FP32, FP16 supports a much smaller
exponent range. In this work, we use the exponent range statistics of input
tensor elements to select which Tensor Cores we use for the GEMM. We evaluate
our method on Random Circuit Sampling (RCS), including Sycamore's quantum
circuit, and show that the throughput is 1.86 times higher at maximum while
maintaining accuracy.Comment: This paper has been accepted to ISC'2
Approaches for Improving Protein Production in Multiple Protease-Deficient Bacillus subtilis Host Strains
A Study on Relationship of public health nurse and community in the damaged society by disaster : A case study of Otsuchi on the Great East Japan Earthquake
This study examines the relationship of municipal public health nurses and community whose medical resources have been stricken by Earthquake and Tsunami. As a result,the first problem is that there is the segmentation between municipal public health nurses and health care center. The Second problem is the disability of community diagnosis. In case of devastated Otsuchi-Town,it was observed that “face-to-face relationships” led to the recovery of health care condition in the devastated community. It is necessary for municipal public health nurses to have a function of inhabitants’ support whenever natural disasters occur. The result points that public health nurses should work community-based activities continually to deal with region emergency issues
Role of the Carboxy-Terminal Region of the GluRε2 Subunit in Synaptic Localization of the NMDA Receptor Channel
AbstractThe synaptic localization of the N-methyl-D-aspartate (NMDA) type glutamate receptor (GluR) channel is a prerequisite for synaptic plasticity in the brain. We generated mutant mice carrying the carboxy-terminal truncated GluRε2 subunit of the NMDA receptor channel. The mutant mice died neonatally and failed to form barrelette structures in the brainstem. The mutation greatly decreased the NMDA receptor–mediated component of hippocampal excitatory postsynaptic potentials and punctate immunofluorescent labelings of GluRε2 protein in the neuropil regions, while GluRε2 protein expression was comparable. Immunostaining of cultured cerebral neurons showed the reduced punctate staining of the truncated GluRε2 protein at synapses. These results suggest that the carboxy-terminal region of the GluRε2 subunit is important for efficient clustering and synaptic localization of the NMDA receptor channel
Enhanced Recombinant Protein Productivity by Genome Reduction in Bacillus subtilis
The emerging field of synthetic genomics is expected to facilitate the generation of microorganisms with the potential to achieve a sustainable society. One approach towards this goal is the reduction of microbial genomes by rationally designed deletions to create simplified cells with predictable behavior that act as a platform to build in various genetic systems for specific purposes. We report a novel Bacillus subtilis strain, MBG874, depleted of 874 kb (20%) of the genomic sequence. When compared with wild-type cells, the regulatory network of gene expression of the mutant strain is reorganized after entry into the transition state due to the synergistic effect of multiple deletions, and productivity of extracellular cellulase and protease from transformed plasmids harboring the corresponding genes is remarkably enhanced. To our knowledge, this is the first report demonstrating that genome reduction actually contributes to the creation of bacterial cells with a practical application in industry. Further systematic analysis of changes in the transcriptional regulatory network of MGB874 cells in relation to protein productivity should facilitate the generation of improved B. subtilis cells as hosts of industrial protein production
Detection of Thyroid Carcinoma Antigen with Quantum Dots and Monoclonal IgM Antibody (JT-95) System
High-intensity fluorescent nanoparticles, quantum dots (QDs), have been applied to a wide range of biological studies and medical studies by taking advantage of their fluorescent properties. On the other hand, we have reported the specificity of JT-95 monoclonal IgM antibody, which recognizes the antigen of thyroid carcinomas. Here we show that the combination of QDs and JT-95 monoclonal antibody was applicable to Western blotting analysis, ELISA-like system, and fluorescent microscopic analysis of SW1736 thyroid carcinoma cell line. We have opened up the possibility that antibodies for higher specific recognition, even IgM, are applicable to the detection system with QDs
Elevation of macrophage-derived chemokine in eosinophilic pneumonia : a role of alveolar macrophages
Macrophage-derived chemokine (MDC/CCL22) and thymus-and activation-regulated chemokine (TARC/CCL17) are ligands for CC chemokine receptor 4. Recently, TARC has been reported to play a role in the pathogenesis of idiopathic eosinophilic pneumonia (IEP). The purpose of this study was to evaluate the role of MDC in IEP and other interstitial lung diseases (ILDs). MDC and TARC in the bronchoalveolar lavage fluid (BALF) were measured by enzymelinked immunosorbent assay in patients with ILDs and healthy volunteers (HV). We also examined the expression of MDC mRNA in alveolar macrophages (AM) by real-time quantitative reverse transcriptase-polymerase chain reaction. Both MDC and TARC were detected only in BALF obtained from IEP patients. The concentration of MDC was higher than that of TARC in all cases. The level of MDC in IEP correlated with that of TARC. AM from IEP patients expressed a significantly higher amount of MDC than that from HV at the levels of protein and mRNA. MDC in BALF from IEP dramatically decreased when patients achieved remission. These findings suggest that MDC, in addition to TARC, might be involved in the pathogenesis of IEP, and AM play a role in the elevation of MDC in IEP
Detailed Analysis of Japanese Population Substructure with a Focus on the Southwest Islands of Japan
Uncovering population structure is important for properly conducting association studies and for examining the demographic history of a population. Here, we examined the Japanese population substructure using data from the Japan Multi-Institutional Collaborative Cohort (J-MICC), which covers all but the northern region of Japan. Using 222 autosomal loci from 4502 subjects, we investigated population substructure by estimating FST among populations, testing population differentiation, and performing principal component analysis (PCA) and correspondence analysis (CA). All analyses revealed a low but significant differentiation between the Amami Islanders and the mainland Japanese population. Furthermore, we examined the genetic differentiation between the mainland population, Amami Islanders and Okinawa Islanders using six loci included in both the Pan-Asian SNP (PASNP) consortium data and the J-MICC data. This analysis revealed that the Amami and Okinawa Islanders were differentiated from the mainland population. In conclusion, we revealed a low but significant level of genetic differentiation between the mainland population and populations in or to the south of the Amami Islands, although genetic variation between both populations might be clinal. Therefore, the possibility of population stratification must be considered when enrolling the islander population of this area, such as in the J-MICC study
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