Reconstructing 3d lung shape from a single 2d image during the deaeration deformation process using model-based data augmentation

Three-dimensional (3D) shape reconstruction is particularly important for computer assisted medical systems, especially in the case of lung surgeries, where large deaeration deformation occurs. Recently, 3D reconstruction methods based on machine learning techniques have achieved considerable success in computer vision. However, it is difficult to apply these approaches to the medical field, because the collection of a massive amount of clinic data for training is impractical. To solve this problem, this paper proposes a novel 3D shape reconstruction method that adopts both data augmentation techniques and convolutional neural networks. In the proposed method, a deformable statistical model of the 3D lungs is designed to augment various training data. As the experimental results demonstrate, even with a small database, the proposed method can realize 3D shape reconstruction for lungs during a deaeration deformation process from only one captured 2D image. Moreover, the proposed data augmentation technique can also be used in other fields where the training data are insufficient

c-fos Gene Expression in Postnatal Rat Retinas with Light/Dark Cycle

AbstractWe examined the diurnal variation of c-fos gene expression during a 12:12 light/dark cycle in developing rat retinas by in situ hybridization histochemistry. c-fos Gene was not expressed before postnatal day 10 (P10) but was expressed on P15 in the outer nuclear layer throughout the dark period and in the inner nuclear layer and the ganglion cell layer during the light period. These results demonstrated that the earliest c-fos gene expression occurred between P11 and P15. The good correlation between the expression of c-fos gene and the genes coding for proteins involved in phototransduction, in terms of their diurnal variation and in their development, suggested that c-fos gene may play a role in the regulation of these genes in retinal cells during the light/dark cycle. Copyright © 1996 Elsevier Science Ltd

Morphological Markers of Chromosomal Instability

Cancer is characterized by genomic complexity and chromosomal instability (CIN). Atypical mitosis and nuclear atypia such as micronuclei have been reported as morphological characteristics of chromosomal instability. An atypical mitotic figure is defined as anything other than the typical form of normal mitosis, including multipolar, ring, dispersed, asymmetrical, and lag-type mitoses. A micronucleus is defined as the small nucleus that forms whenever a chromosome or its fragment is not incorporated into one of the daughter nuclei during cell division. A telomere plays a key role in chromosomal instability. Telomere dysfunction induces fusion of chromatids and chromosome missegregation and this phenomenon can be observed as abnormal mitotic figures and micronuclei. Detection of morphological markers of chromosomal instability using pathological specimens, even small biopsy or cytological specimens, may provide valuable information concerning the prognosis of cancers. Here, we discuss morphological assessment of chromosomal instability using routine pathological specimens

Deformation analysis of surface and bronchial structures in intraoperative pneumothorax using deformable mesh registration

The positions of nodules can change because of intraoperative lung deflation, and the modeling of pneumothorax-associated deformation remains a challenging issue for intraoperative tumor localization. In this study, we introduce spatial and geometric analysis methods for inflated/deflated lungs and discuss heterogeneity in pneumothorax-associated lung deformation. Contrast-enhanced CT images simulating intraoperative conditions were acquired from live Beagle dogs. The images contain the overall shape of the lungs, including all lobes and internal bronchial structures, and were analyzed to provide a statistical deformation model that could be used as prior knowledge to predict pneumothorax. To address the difficulties of mapping pneumothorax CT images with topological changes and CT intensity shifts, we designed deformable mesh registration techniques for mixed data structures including the lobe surfaces and the bronchial centerlines. Three global-to-local registration steps were performed under the constraint that the deformation was spatially continuous and smooth, while matching visible bronchial tree structures as much as possible. The developed framework achieved stable registration with a Hausdorff distance of less than 1 mm and a target registration error of less than 5 mm, and visualized deformation fields that demonstrate per-lobe contractions and rotations with high variability between subjects. The deformation analysis results show that the strain of lung parenchyma was 35% higher than that of bronchi, and that deformation in the deflated lung is heterogeneous

幼児の生活をつくる-幼児期の「しつけ」と保育者の役割-

Shaping good habits and manners is one of the most important goals, as well as developmental tasks, in early childhood. Although it has been said that discipline in the home is vital to children\u27s education, Japanese parents, in recent years, are busy with their daily work, and their children\u27s upbringing is left almost entirely to early childhood caregivers and teachers. Consequently, caregivers and teachers have some to take weighty responsibility and to have an important influence upon the children\u27s living. Young children\u27s daily living is most effectively shaped by their "significant others". Therefore, teacher-child relationship quality should be given special consideration

A genome-wide screen identifies a single β-defensin gene cluster in the chicken: implications for the origin and evolution of mammalian defensins

BACKGROUND: Defensins comprise a large family of cationic antimicrobial peptides that are characterized by the presence of a conserved cysteine-rich defensin motif. Based on the spacing pattern of cysteines, these defensins are broadly divided into five groups, namely plant, invertebrate, α-, β-, and θ-defensins, with the last three groups being mostly found in mammalian species. However, the evolutionary relationships among these five groups of defensins remain controversial. RESULTS: Following a comprehensive screen, here we report that the chicken genome encodes a total of 13 different β-defensins but with no other groups of defensins being discovered. These chicken β-defensin genes, designated as Gallinacin 1–13, are clustered densely within a 86-Kb distance on the chromosome 3q3.5-q3.7. The deduced peptides vary from 63 to 104 amino acid residues in length sharing the characteristic defensin motif. Based on the tissue expression pattern, 13 β-defensin genes can be divided into two subgroups with Gallinacin 1–7 being predominantly expressed in bone marrow and the respiratory tract and the remaining genes being restricted to liver and the urogenital tract. Comparative analysis of the defensin clusters among chicken, mouse, and human suggested that vertebrate defensins have evolved from a single β-defensin-like gene, which has undergone rapid duplication, diversification, and translocation in various vertebrate lineages during evolution. CONCLUSIONS: We conclude that the chicken genome encodes only β-defensin sequences and that all mammalian defensins are evolved from a common β-defensin-like ancestor. The α-defensins arose from β-defensins by gene duplication, which may have occurred after the divergence of mammals from other vertebrates, and θ-defensins have arisen from α-defensins specific to the primate lineage. Further analysis of these defensins in different vertebrate lineages will shed light on the mechanisms of host defense and evolution of innate immunity

Depth profiles of radioactive cesium in soil using a scraper plate over a wide area surrounding the Fukushima Dai-ichi Nuclear Power Plant, Japan

AbstractDuring the Fukushima Dai-ichi Nuclear Power Plant (NPP) accident, radioactive cesium was released in the environment and deposited on the soils. Depth profiles of radioactive cesium in contaminated soils provide useful information not only for radiation protection and decontamination operations but also for geoscience and radioecology studies. Soil samples were collected using a scraper plate three times between December 2011 and December 2012 at 84 or 85 locations within a 100-km radius of the Fukushima Dai-ichi NPP. In most of the obtained radioactive cesium depth profiles, it was possible to fit the concentration to a function of mass depth as either an exponential or hyperbolic secant function. By using those functions, following three parameters were estimated: (i) relaxation mass depth β (g cm−2), (ii) effective relaxation mass depth βeff (g cm−2), which is defined for a hyperbolic secant function as the relaxation mass depth of an equivalent exponential function giving the same air kerma rate at 1 m above the ground as the inventory, and (iii) 1/10 depth L1/10 (cm), at which the soil contains 90% of the inventory. The average β value (wet weight) including ones by hyperbolic secant function in December 2012, was 1.29 times higher than that in December 2011. In fact, it was observed that depth profiles at some study sites deviated from the typical exponential distributions over time. These results indicate the gradual downward migration of radioactive cesium in the soils. The L1/10 values in December 2012 were summarized and presented on a map surrounding the Fukushima Dai-ichi NPP, and the average value of L1/10 was 3.01 cm (n = 82) at this time. It was found that radioactive cesium remained within 5 cm of the ground surface at most study sites (71 sites). The sech function can also be used to estimate the downward migration rate V (kg m−2 y−1). The V values in December 2012 (n = 25) were in good agreement with those found by a realistic approach using a diffusion and migration model. Almost all values ranged between 1.7 and 9.6 kg m−2 y−1 in this study