Towards ultra-high resolution 3D reconstruction of a whole rat brain from 3D-PLI data

3D reconstruction of the fiber connectivity of the rat brain at microscopic scale enables gaining detailed insight about the complex structural organization of the brain. We introduce a new method for registration and 3D reconstruction of high- and ultra-high resolution (64 $\mu$m and 1.3 $\mu$m pixel size) histological images of a Wistar rat brain acquired by 3D polarized light imaging (3D-PLI). Our method exploits multi-scale and multi-modal 3D-PLI data up to cellular resolution. We propose a new feature transform-based similarity measure and a weighted regularization scheme for accurate and robust non-rigid registration. To transform the 1.3 $\mu$m ultra-high resolution data to the reference blockface images a feature-based registration method followed by a non-rigid registration is proposed. Our approach has been successfully applied to 278 histological sections of a rat brain and the performance has been quantitatively evaluated using manually placed landmarks by an expert.Comment: 9 pages, Accepted at 2nd International Workshop on Connectomics in NeuroImaging (CNI), MICCAI'201

Interaction-induced effects in the nonlinear coherent response of quantum-well excitons

Interaction-induced processes are studied using the third-order nonlinear polarization created in polarization-dependent four-wave-mixing experiments (FWM) on a ZnSe single quantum well. We discuss their influence by a comparison of the experimental FWM with calculations based on extended optical Bloch equations including local-field effects, excitation-induced dephasing, and biexciton formation. The investigations show that, for copolarized input fields, excitation-induced dephasing is the dominant FWM mechanism, followed by the conventional density-grating FWM process, biexcitonic contributions, and local-field effects. For cross-linear polarized input fields the excitation-induced dephasing mechanism is canceled so that the conventional density-grating FWM process and biexcitonic contributions are dominating

Mixed biexcitons in single quantum wells

Biexcitonic complexes in a ZnSe single quantum well are investigated by spectrally resolved four-wave mixing (FWM). The formation of heavy-heavy-hole XXh and of mixed heavy-light-hole XXm biexcitons showing binding energies of Δh=4.8meV and Δm=2.8meV is identified by polarization selection rules. The coherent dynamics of the FWM response and the observed FWM intensity ratio between the XXh and XXm biexciton-induced nonlinear signals are in agreement with the solution of an extended optical Bloch equation

Improving the Performance of a Low-rate Image Coder Connected to a Noisy Gaussian Channel.

The problem of communicating the output of a vector quantizer image coder over Gaussian channel is investigated. A fixed bandwidth is assumed to be available and the energy per modulator symbol is fixed. The reference system is a QPSK modulator with a gray code mapping between bits and modulator symbols. The techniques investigated include Hamming coding, convolutional coding, 8-PSK trellis-coded modulation, and methods based on simulated annealing coupled with quantizer optimization