81 research outputs found
Pentacoordinated Organoaluminum Complexes: A Computational Insight
The geometry and the electronic structure of a series
of organometallic
pentacoordinated aluminum complexes bearing tri- or tetradentate N,O-based
ligands have been investigated with theoretical methods. The BP86,
B3LYP, and M06 functionals reproduce with low accuracy the geometry
of the selected complexes. The worst result was obtained for the complex
bearing a Schiff base ligand with a pendant donor arm, <i>aeimp</i>AlMe<sub>2</sub> (<i>aeimp</i> = <i>N</i>-2-(dimethylamino)Âethyl-(3,5-di-<i>tert</i>-butyl)Âsalicylaldimine). In particular, the Al–N<sub>amine</sub> bond distance was unacceptably overestimated. This failure
suggests a reasonably flat potential energy surface with respect to
Al–N elongation, indicating a weak interaction with probably
a strong component of dispersion forces. MP2 and M06-2X methods led
to an acceptable value for the same Al–N distance. Better results
were obtained with the addition of the dispersion correction to the
hybrid B3LYP functional (B3LYP-D). Natural bond orbital analysis revealed
that the contribution of the d orbital to the bonding is very small,
in agreement with several previous studies of hypervalent molecules.
The donation of electronic charge from the ligand to metal mainly
consists in the interactions of the lone pairs on the donor atoms
of the ligands with the s and p valence orbitals of the aluminum.
The covalent bonding of the Al with the coordinated ligand is weak,
and the interactions between Al and the coordinated ligands are largely
ionic. To further explore the geometrical and electronic factors affecting
the formation of these pentacoordianted aluminum complexes, we considered
the tetracoordinated complex <i>imp</i>AlMe<sub>2</sub> (<i>imp</i> = <i>N</i>-isopropyl-(3,5-di-<i>tert</i>-butyl)Âsalicylaldimine)), analogous to <i>aeimp</i>AlMe<sub>2</sub>, and we investigated the potential energy surface around
the aluminum atom corresponding to the approach of NMe<sub>3</sub> to the metal center. At the MP2/6-31GÂ(d) level of theory, a weak
attraction was revealed only when NMe<sub>3</sub> heads toward the
metal center through the directions trans to the nitrogen atom. The
analysis of the binding energies for this adducts revealed that the
formation of the pentacoordinated derivative is a result of a subtle
balance between the penalty paid to deform the <i>imp</i>AlMe<sub>2</sub> complex and energy gain resulting from interaction
between the two fragments
Selectivity of Electrochemical CO<sub>2</sub> Reduction on Metal Electrodes: The Role of the Surface Oxidized Layer
In
the past decade, density functional theory (DFT) calculations
have been employed to study the mechanism of electrochemical CO2 reduction reactions. However, the lack of understanding of
the CO2 chemisorption states, proton-coupled-electron-transfer
(PCET) steps, and dynamic redox reactions of the electrode surface
has limited the reliability of these simulations. The *OCHO and *COOH
species are widely recognized as the key intermediates for the formic
acid and carbon monoxide production, respectively. However, the comparison
between the binding energies of *OCHO and *COOH cannot directly indicate
the reaction trends. In this work, we propose that the energy difference
between *COOH on the neutral and extra-electron substrates, in the
form of [ΔG(*COOHe) – ΔG(*COOH)], can serve as a descriptor for the electrochemical
CO2 reduction selectivity. In addition, the computational
hydrogen electrode (CHE) model is revised by applying the previously
studied charged species. The noninteger charge-transfer (NICT) model
is used for the calculation of energy profile at a certain potential,
which can have a good prediction of the potential-limiting step. The
surface oxide of metal electrodes is found to play a key role in modulating
the selectivity and improving the electron transfer to CO2
Ď€-Face Donation from the Aromatic N-Substituent of N-Heterocyclic Carbene Ligands to Metal and Its Role in Catalysis
In this work, we calculate the redox potential in a series
of Ir
and Ru complexes bearing a N-heterocyclic carbene (NHC) ligand presenting
different Y groups in the para position of the aromatic N-substituent.
The calculated redox potentials excellently correlate with the experimental
Δ<i>E</i><sub>1/2</sub> potentials, offering a handle
to rationalize the experimental findings. Analysis of the HOMO of
the complexes before oxidation suggests that electron-donating Y groups
destabilize the metal centered HOMO. Energy decomposition of the metal–NHC
interaction indicates that electron-donating Y groups reinforce this
interaction in the oxidized complexes. Analysis of the electron density
in the reduced and oxidized states of representative complexes indicates
a clear donation from the C<sub>ipso</sub> of the N-substituents to
an empty d orbital on the metal. In case of the Ru complexes, this
mechanism involves the Ru–alkylidene moiety. All of these results
suggest that electron-donating Y groups render the aromatic N-substituent
able to donate more density to electron-deficient metals through the
C<sub>ipso</sub> atom. This conclusion suggests that electron-donating
Y groups could stabilize higher oxidation states during catalysis.
To test this hypothesis, we investigated the effect of differently
donating Y groups in model reactions of Ru-catalyzed olefin metathesis
and Pd-catalyzed C–C cross-coupling. Consistent with the experimental
results, calculations indicate an easier reaction pathway if the N-substituent
of the NHC ligand presents an electron-donating Y group
Determination of the Intrinsic Defect at the Origin of Poor H<sub>2</sub> Evolution Performance of the Monoclinic BiVO<sub>4</sub> Photocatalyst Using Density Functional Theory
The effects of intrinsic
defects in monoclinic bismuth vanadate
(BiVO<sub>4</sub>) on its stability and optoelectronic properties
for photochemical water splitting application were examined using
density functional theory. Among the most favorable structures, only
that associated with V-antisites on Bi with additional Bivacancies
(Bi<sub>(1–5<i>x</i>)</sub>V<sub>(1+3<i>x</i>)</sub>O<sub>4</sub> with <i>x</i> = 0.0625) revealed narrower
band gap energy by 0.5 eV compared to pristine material (calculated
value is 2.8 eV) giving a value of 2.3 eV, which is very close to
the experimentally reported ones (in the 2.4–2.5 eV range).
The low electron mobility reported experimentally for this material
was also confirmed by the relatively large electron effective masses
obtained for the intrinsic defective Bi<sub>(1–5<i>x</i>)</sub>V<sub>(1+3<i>x</i>)</sub>O<sub>4</sub> (<i>x</i> = 0.0625) structure along the three principal crystallographic
directions. The strongly localized nature of the accommodated electrons
on the d-orbitals of the newly substituted V at Bi sites was also
predicted to be at the origin of the poor H<sub>2</sub> evolution
performance of this material
Application of Semiempirical Methods to Transition Metal Complexes: Fast Results but Hard-to-Predict Accuracy
A series of semiempirical
PM6* and PM7 methods has been tested
in reproducing relative conformational energies of 27 realistic-size
complexes of 16 different transition metals (TMs). An analysis of
relative energies derived from single-point energy evaluations on
density functional theory (DFT) optimized conformers revealed pronounced
deviations between semiempirical and DFT methods, indicating a fundamental
difference in potential energy surfaces (PES). To identify the origin
of the deviation, we compared fully optimized PM7 and respective DFT
conformers. For many complexes, differences in PM7 and DFT conformational
energies have been confirmed often manifesting themselves in false
coordination of some atoms (H, O) to TMs and chemical transformations/distortion
of coordination center geometry in PM7 structures. Despite geometry
optimization with fixed coordination center geometry leading to some
improvements in conformational energies, the resulting accuracy is
still too low to recommend explored semiempirical methods for out-of-the-box
conformational search/sampling: careful testing is always needed
Catalytic Role of Nickel in the Decarbonylative Addition of Phthalimides to Alkynes
Density
functional theory calculations have been used to investigate the catalytic
role of nickel(0) in the decarbonylative addition of phthalimides
to alkynes. According to Kurahashi et al. the plausible reaction mechanism
involves a nucleophilic attack of nickel at an imide group, giving
a six-membered metallacycle, followed by a decarbonylation and insertion
of an alkyne leading to a seven-membered metallacycle. Finally a reductive
elimination process produces the desired product and regenerates the
nickelÂ(0) catalyst. In this paper, we present a full description of
the complete reaction pathway along with possible alternative pathways,
which are predicted to display higher upper barriers. Our computational
results substantially confirm the proposed mechanism, offering a detailed
geometrical and energetical understanding of all the elementary steps
Application of Semiempirical Methods to Transition Metal Complexes: Fast Results but Hard-to-Predict Accuracy
A series of semiempirical
PM6* and PM7 methods has been tested
in reproducing relative conformational energies of 27 realistic-size
complexes of 16 different transition metals (TMs). An analysis of
relative energies derived from single-point energy evaluations on
density functional theory (DFT) optimized conformers revealed pronounced
deviations between semiempirical and DFT methods, indicating a fundamental
difference in potential energy surfaces (PES). To identify the origin
of the deviation, we compared fully optimized PM7 and respective DFT
conformers. For many complexes, differences in PM7 and DFT conformational
energies have been confirmed often manifesting themselves in false
coordination of some atoms (H, O) to TMs and chemical transformations/distortion
of coordination center geometry in PM7 structures. Despite geometry
optimization with fixed coordination center geometry leading to some
improvements in conformational energies, the resulting accuracy is
still too low to recommend explored semiempirical methods for out-of-the-box
conformational search/sampling: careful testing is always needed
Mechanistic Insights into the Organopolymerization of <i>N</i>‑Methyl <i>N</i>‑Carboxyanhydrides Mediated by <i>N</i>‑Heterocyclic Carbenes
We
report on a DFT investigation of initiation, propagation, and
termination in the organopolymerization of <i>N</i>-methyl <i>N</i>-carboxyanhydrides toward cyclic polyÂ(<i>N</i>-substituted glycine)Âs, promoted by <i>N</i>-heterocyclic
carbenes (NHC). Calculations support the experimentally based hypothesis
of two competing initiation pathways. The first leading to formation
of a zwitterionic adduct by nucleophilic addition of the NHC to one
of the carbonyl groups of monomer. The second via acid–base
reactivity, starting with the NHC promoted abstraction of a proton
from the methylene group of the monomer, leading to an ion-pair-type
adduct, followed by nucleophilic attack of the adduct to a new monomer
molecule. Chain elongation can proceed from both the initiation adducts
via nucleophilic attack of the carbamate chain-end to a new monomer
molecule via concerted elimination of CO<sub>2</sub> from the carbamate
chain-end. Energy barriers along all the considered termination pathways
are remarkably higher that the energy barrier along the chain elongation
pathways, consistent with the quasi-living experimental behavior.
Analysis of the competing termination pathways suggests that the cyclic
species determined via MALDI-TOF MS experiments consists of a zwitterionic
species deriving from nucleophilic attack of the N atom of the carbamate
chain-end to the Cî—»O group bound to the NHC moiety
Application of Semiempirical Methods to Transition Metal Complexes: Fast Results but Hard-to-Predict Accuracy
A series of semiempirical
PM6* and PM7 methods has been tested
in reproducing relative conformational energies of 27 realistic-size
complexes of 16 different transition metals (TMs). An analysis of
relative energies derived from single-point energy evaluations on
density functional theory (DFT) optimized conformers revealed pronounced
deviations between semiempirical and DFT methods, indicating a fundamental
difference in potential energy surfaces (PES). To identify the origin
of the deviation, we compared fully optimized PM7 and respective DFT
conformers. For many complexes, differences in PM7 and DFT conformational
energies have been confirmed often manifesting themselves in false
coordination of some atoms (H, O) to TMs and chemical transformations/distortion
of coordination center geometry in PM7 structures. Despite geometry
optimization with fixed coordination center geometry leading to some
improvements in conformational energies, the resulting accuracy is
still too low to recommend explored semiempirical methods for out-of-the-box
conformational search/sampling: careful testing is always needed
Major Difference in Visible-Light Photocatalytic Features between Perfect and Self-Defective Ta<sub>3</sub>N<sub>5</sub> Materials: A Screened Coulomb Hybrid DFT Investigation
Relevant
properties to visible-light overall water splitting reactions of perfect
and self-defective bulk Ta<sub>3</sub>N<sub>5</sub> semiconductor
photocatalysts are investigated using accurate first-principles quantum
calculations on the basis of density functional theory (DFT, including
the perturbation theory DFPT) within the screened coulomb hybrid (HSE06)
exchange-correlation formalism. Among the various explored self-defective
structures, a strong stabilization is obtained for the configuration
displaying a direct interaction between the created N- and Ta-vacancies.
In the lowest-energy structure, each of the three created Ta-vacancies
and the five created N-vacancies is found to be in aggregated disposition,
leading to the formation of cages into the lattice. Although the calculated
structural, electronic, and optical properties of the two materials
are found to be very similar and in good agreement with available
experimental works, their photocatalytic features for visible-light
overall water splitting reactions show completely different behaviors.
On the basis of calculated band edge positions relative to water redox
potentials, the perfect Ta<sub>3</sub>N<sub>5</sub> (calculated band
gap of 2.2 eV) is predicted by HSE06 to be a good candidate only for
H<sup>+</sup> reduction while the self-defective Ta<sub>3</sub>N<sub>5</sub> (calculated band gap of 2.0 eV) reveals suitable band positions
for both water oxidation and H<sup>+</sup> reduction similar to the
experimental data reported on Ta<sub>3</sub>N<sub>5</sub> powders.
Its ability to reduce H<sup>+</sup> is predicted to be lower than
the perfect one. However, the strongly localized electronic characters
of the valence band (VB) and conduction band (CB) edge states of the
self-defective material only on the N 2p and Ta 5d orbitals surrounding
the aggregated N- and Ta-vacancies are expected to strongly limit
the probability of photogenerated carrier mobility through its crystal
structure
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