Additional file 2: Table S6. of Genome-wide identification of potato long intergenic noncoding RNAs responsive to Pectobacterium carotovorum subspecies brasiliense infection

List of RT-PCR primers used in this study. (XLSX 8 kb

Additional file 4: Figure S1. of Genome-wide identification of potato long intergenic noncoding RNAs responsive to Pectobacterium carotovorum subspecies brasiliense infection

A) Comparison of the genomic distribution of lincRNAs and protein-coding genes across the 12 potato chromosomes. The outer grey track represents the 12 potato chromosomes, with a scale (Mb) showing the length of each chromosome. The red histograms (second track with an outer orientation) and blue histograms (third track with inner orientation) represent the abundance and distribution of mRNA and lincRNAs, respectively, throughout the potato genome. The bin size (histogram width) = 5 Mbp). B) Comparison of LincRNA lengths to protein-coding mRNA transcripts in potato (PGSC_DM_v4.03 genome assembly). (PDF 258 kb

Rubus lambertianus Ser.

原著和名: シマバライチゴ科名: バラ科 = Rosaceae採集地: 長崎県 島原市 眉山 (肥前 島原市 眉山)採集日: 1975/1/3採集者: 萩庭丈壽整理番号: JH009571国立科学博物館整理番号: TNS-VS-95957

Chloranthus glaber Makino

原著和名: センリャウ科名: センリョウ科 = Chloranthaceae採集地: 千葉県 千葉市 千葉大学 (下総 千葉市 千葉大学)採集日: 1971/5/27採集者: 萩庭丈壽整理番号: JH008984国立科学博物館整理番号: TNS-VS-95898

Mary Strobel Price, collaborative piano

Jake HeggieFernando ObradorsWilliam BolcomFritz Kreisler & Eddie Sout

Additional file 5: Table S5. of Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum

Conservation analysis in Soft Rot Enterobacteriaceae (XLSX 16 kb

Additional file 3: Table S3. of Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum

List of in silico predicted sRNAs using RITs from WebGester DB. S2A: Forward strand predictions. S2B: Complementary strand predictions (XLSX 30 kb

Additional file 9: Table S9. of Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum

List of primers used for RT-qPCR validation of RNA-seq expression data (DOCX 12 kb

Additional file 1: Table S1. of Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum

Complete list of RNA-seq detected sRNAs (XLSX 19 kb

Additional file 4: Table S4. of Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum

Combined list of predicted sRNA using SIPHT and RITs from WebGester DB. S3A: Matches of in silico predictions with SIPHT (forward strand) S3B: Matches of in silico predictions with SIPHT (complementary strand) (XLSX 15 kb