450 research outputs found
Cornual Abscess Rupture: A Rare Etiology of Acute Abdomen
Ruptured cornual abscess or pyometra can resemble other more common causes of acute abdomen, including appendicitis, diverticulitis, tubo-ovarian abscess, and perforated viscus. Despite its rarity, the diagnosis of ruptured pyometra should always be considered in females presenting with acute abdominal pain, particularly in the setting of a retained intrauterine device
First passage times and asymmetry of DNA translocation
Motivated by experiments in which single-stranded DNA with a short hairpin
loop at one end undergoes unforced diffusion through a narrow pore, we study
the first passage times for a particle, executing one-dimensional brownian
motion in an asymmetric sawtooth potential, to exit one of the boundaries. We
consider the first passage times for the case of classical diffusion,
characterized by a mean-square displacement of the form , and for the case of anomalous diffusion or subdiffusion, characterized by a
mean-square displacement of the form with
. In the context of classical diffusion, we obtain an expression
for the mean first passage time and show that this quantity changes when the
direction of the sawtooth is reversed or, equivalently, when the reflecting and
absorbing boundaries are exchanged. We discuss at which numbers of `teeth'
(or number of DNA nucleotides) and at which heights of the sawtooth potential
this difference becomes significant. For large , it is well known that the
mean first passage time scales as . In the context of subdiffusion, the
mean first passage time does not exist. Therefore we obtain instead the
distribution of first passage times in the limit of long times. We show that
the prefactor in the power relation for this distribution is simply the
expression for the mean first passage time in classical diffusion. We also
describe a hypothetical experiment to calculate the average of the first
passage times for a fraction of passage events that each end within some time
. We show that this average first passage time scales as in
subdiffusion.Comment: 10 pages, 4 figures We incorporated reviewers' suggestions from
Physical Review E. We reformulated a few paragraphs in the introduction and
further clarified the issue of the (a)symmetry of passage times. In the
results section, we re-expressed the results in a form that manifest the
important features. We also added a few references concerning anomalous
diffusion. The look (but not the content) of figure 1 was also change
Investigation of passive flow control techniques to enhance the stall characteristics of a microlight aircraft
This report investigates the enhancement of aerodynamic stall characteristics of a Skyranger microlight aircraft by the use of passive flow control techniques, namely vortex generators and turbulators. Each flow control device is designed and scaled to application conditions. Force balance measurements and surface oil flow visualisation are carried out on a half-model of the microlight to further investigate the nature of the flow on the aircraft with and without the flow control devices. The results indicate a clear advantage to the use of turbulators compared with vortex generators. Turbulators increased the maximum lift coefficient by 2.8%, delayed the onset of stall by increasing the critical angle by 17.6% and reduced the drag penalty at both lower (pre-stall) and higher angles of attack by 8% compared to vortex generators. With vortex generators applied, the results indicated a delayed stall with an increase in the critical angle by 2% and a reduced drag penalty at higher angles of attack
Demonstration of the protective effects of fluorescent proteins in baculoviruses exposed to ultraviolet light inactivation
Autographa californica multiple nucleopolyhedrovirus (AcMNPV) recombinants, namely AcRFP produced by fusion of the red fluorescent protein (RFP) gene with the polyhedrin gene, and a recombinant (pAcUW21-23GFP) carrying the green fluorescent protein (GFP) in its viral envelope, were evaluated for their resistance to inactivation by ultraviolet light. AcRFP recombinants produced incomplete polyhedra with low infectivity for Trichoplusia ni larvae, whereas AcuW21-23GFP produced normal polyhedra with high infectivity. Electron microscopy of AcRFP CL14 showed the incorporation of very few viral particles into polyhedrin matrix protein material. The LC(50) for AcuW21-23GFP was 0.10 occlusion bodies/mm(2), whereas the LC(50) values for several AcRFP recombinants ranged from 20 to 329 occlusion bodies/mm(2). When both the RFP and GFP recombinants were exposed to ultraviolet light (UV-B 280–320 nm), the results support the conclusion that these fluorescent proteins afford some protection against its damaging effects. Abbreviation: / AcMNPV: Autographa californica multiple nucleopolyhedrovirus BV: budded virus CPE: cytopathogenic effect ECV: extracellular virus OB: occlusion body ODV: occlusion derived virus RFP: red fluorescent protein GFP: green fluorescent protein TCID(50): tissue culture infective dose at the 50 % level UV-B: ultraviolet light of 280–320 n
Model-based relative entropy stochastic search
Stochastic search algorithms are general black-box optimizers. Due to their ease
of use and their generality, they have recently also gained a lot of attention in operations
research, machine learning and policy search. Yet, these algorithms require
a lot of evaluations of the objective, scale poorly with the problem dimension, are
affected by highly noisy objective functions and may converge prematurely. To
alleviate these problems, we introduce a new surrogate-based stochastic search
approach. We learn simple, quadratic surrogate models of the objective function.
As the quality of such a quadratic approximation is limited, we do not greedily exploit
the learned models. The algorithm can be misled by an inaccurate optimum
introduced by the surrogate. Instead, we use information theoretic constraints to
bound the ‘distance’ between the new and old data distribution while maximizing
the objective function. Additionally the new method is able to sustain the exploration
of the search distribution to avoid premature convergence. We compare our
method with state of art black-box optimization methods on standard uni-modal
and multi-modal optimization functions, on simulated planar robot tasks and a
complex robot ball throwing task. The proposed method considerably outperforms
the existing approaches
Energetic changes caused by antigenic module insertion in a virus-like particle revealed by experiment and molecular dynamics simulations
The success of recombinant virus-like particles (VLPs) for human papillomavirus and hepatitis B demonstrates the potential of VLPs as safe and efficacious vaccines. With new modular designs emerging, the effects of antigen module insertion on the self-assembly and structural integrity of VLPs should be clarified so as to better enabling improved design. Previous work has revealed insights into the molecular energetics of a VLP subunit, capsomere, comparing energetics within various solution conditions known to drive or inhibit self-assembly. In the present study, molecular dynamics (MD) simulations coupled with the molecular mechanics-Poisson-Boltzmann surface area (MM-PBSA) method were performed to examine the molecular interactions and energetics in a modular capsomere of a murine polyomavirus (MPV) VLP designed to protect against influenza. Insertion of an influenza antigenic module is found to lower the binding energy within the capsomere, and a more active state is observed in Assembly Buffer as compared with that in Stabilization Buffer, which has been experimentally validated through measurements using differential scanning calorimetry. Further in-depth analysis based on free-energy decomposition indicates that destabilized binding can be attributed to electrostatic interaction induced by the chosen antigen module. These results provide molecular insights into the conformational stability of capsomeres and their abilities to be exploited for antigen presentation, and are expected to be beneficial for the biomolecular engineering of VLP vaccines.Lin Zhang, Ronghong Tang, Shu Bai, Natalie K. Connors, Linda H.L. Lua, Yap P. Chuan, Anton P.J. Middelberg, Yan Su
Polymer translocation through a nanopore - a showcase of anomalous diffusion
The translocation dynamics of a polymer chain through a nanopore in the
absence of an external driving force is analyzed by means of scaling arguments,
fractional calculus, and computer simulations. The problem at hand is mapped on
a one dimensional {\em anomalous} diffusion process in terms of reaction
coordinate (i.e. the translocated number of segments at time ) and shown
to be governed by an universal exponent whose
value is nearly the same in two- and three-dimensions. The process is described
by a {\em fractional} diffusion equation which is solved exactly in the
interval with appropriate boundary and initial conditions. The
solution gives the probability distribution of translocation times as well as
the variation with time of the statistical moments: , and which provide full description of the diffusion process. The
comparison of the analytic results with data derived from extensive Monte Carlo
(MC) simulations reveals very good agreement and proves that the diffusion
dynamics of unbiased translocation through a nanopore is anomalous in its
nature.Comment: 5 pages, 3 figures, accepted for publication in Phys. Rev.
Development of Parkinsonism following exposure to aripiprazole: two case reports
which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Introduction: Aripiprazole is a novel atypical neuroleptic used in the treatment of psychosis. A few recent studies have demonstrated an association between the use of aripiprazole and an exacerbation of Parkinsonism, although this relationship is poorly defined. To our knowledge, this is the first case series describing an onset of Parkinsonism in patients without prior history of Parkinson’s diseas
Non-Carrier Nanoparticles Adjuvant ModularProtein Vaccine in a Particle-Dependent Manner
Nanoparticles are increasingly used to adjuvant vaccine formulations due to their biocompatibility, ease of manufacture and the opportunity to tailor their size, shape, and physicochemical properties. The efficacy of similarly-sized silica (Si-OH), poly (D,L-lactic-co-glycolic acid) (PLGA) and poly caprolactone (PCL) nanoparticles (nps) to adjuvant recombinant capsomere presenting antigenic M2e modular peptide from Influenza A virus (CapM2e) was investigated in vivo. Formulation of CapM2e with Si-OH or PLGA nps significantly boosted the immunogenicity of modular capsomeres, even though CapM2e was not actively attached to the nanoparticles prior to injection (i.e., formulation was by simple mixing). In contrast, PCL nps showed no significant adjuvant effect using this simple-mixing approach. The immune response induced by CapM2e alone or formulated with nps was antibody-biased with very high antigen-specific antibody titer and less than 20 cells per million splenocytes secreting interferon gamma. Modification of silica nanoparticle surface properties through amine functionalization and pegylation did not lead to significant changes in immune response. This study confirms that simple mixing-based formulation can lead to effective adjuvanting of antigenic protein, though with antibody titer dependent on nanoparticle physicochemical properties
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