Acquired Type III Secretion System Determines Environmental Fitness of Epidemic Vibrio parahaemolyticus in the Interaction with Bacterivorous Protists

Genome analyses of marine microbial communities have revealed the widespread occurrence of genomic islands (GIs), many of which encode for protein secretion machineries described in the context of bacteria-eukaryote interactions. Yet experimental support for the specific roles of such GIs in aquatic community interactions remains scarce. Here, we test for the contribution of type III secretion systems (T3SS) to the environmental fitness of epidemic Vibrio parahaemolyticus. Comparisons of V. parahaemolyticus wild types and T3SS-defective mutants demonstrate that the T3SS encoded on genome island VPaI-7 (T3SS-2) promotes survival of V. parahaemolyticus in the interaction with diverse protist taxa. Enhanced persistence was found to be due to T3SS-2 mediated cytotoxicity and facultative parasitism of V. parahaemolyticus on coexisting protists. Growth in the presence of bacterivorous protists and the T3SS-2 genotype showed a strong correlation across environmental and clinical isolates of V. parahaemolyticus. Short-term microcosm experiments provide evidence that protistan hosts facilitate the invasion of T3SS-2 positive V. parahaemolyticus into a coastal plankton community, and that water temperature and productivity further promote enhanced survival of T3SS-2 positive V. parahaemolyticus. This study is the first to describe the fitness advantage of GI-encoded functions in a microbial food web, which may provide a mechanistic explanation for the global spread and the seasonal dynamics of V. parahaemolyticus pathotypes, including the pandemic serotype cluster O3:K6, in aquatic environments

Climate change effects on winter chill for tree crops with chilling requirements on the Arabian Peninsula

Fruit production systems that rely on winter chill for breaking of dormancy might be vulnerable to climatic change. We investigated decreases in the number of winter chilling hours (0–7.2°C) in four mountain oases of Oman, a marginal area for the production of fruit trees with chilling requirements. Winter chill was calculated from long-term hourly temperature records. These were generated based on the correlation of hourly temperature measurements in the oases with daylength and daily minimum and maximum temperatures recorded at a nearby weather station. Winter chill was estimated for historic temperature records between 1983 and 2008, as well as for three sets of synthetic 100-year weather records, generated to represent historic conditions, and climatic changes likely to occur within the next 30 years (temperatures elevated by 1°C and 2°C). Our analysis detected a decrease in the numbers of chilling hours in high-elevation oases by an average of 1.2–9.5 h/year between 1983 and 2008, a period during which, according to the scenario analysis, winter chill was sufficient for most important species in most years in the highest oasis. In the two climate change scenarios, pomegranates, the most important tree crop, received insufficient chilling in 13% and 75% of years, respectively. While production of most traditional fruit trees is marginal today, with trees barely fulfilling their chilling requirements, such production might become impossible in the near future. Similar developments are likely to affect other fruit production regions around the world

Actin nucleation: bacteria get in-Spired

Spir proteins nucleate actin polymerization by assembling a linear actin oligomer along a cluster of four actin-binding WH2 domains, and this process is enhanced by formins of the Cappuccino family. The discovery of Spir-like proteins in bacteria indicates that pathogens have adopted this mechanism to manipulate the host actin cytoskeleton

Environmental change and out-migration: evidence from Nepal

Scholars and activists have hypothesized a connection between environmental change and out-migration. In this paper we test this hypothesis using data from Nepal. We operationalize environmental change in terms of declining land cover, rising times required to gather organic inputs, increasing population density, and perceived declines in agricultural productivity. In general, environmental change is more strongly related to short- than long-distance moves. Holding constant the effects of other social and economic variables, we find that local moves are predicted by perceived declines in productivity, declining land cover, and increasing time required to gather firewood. Long-distance moves are predicted by perceived declines in productivity, but the effect is weaker than in the model of short-distance mobility. We also show that effects of environmental change vary by gender and ethnicity, with women being more affected by changes in the time required to gather fodder and men by changes in the time to gather firewood, and high caste Hindus generally being less affect than others by environmental change