Investigating the spectroscopy behavior of undetected 1F1F-wave charmed baryons

In this work, we investigate the spectroscopic properties of $1F$-wave charmed baryons, which have not yet been observed in experiments. We employ a non-relativistic potential model and utilize the Gaussian expansion method to obtain the mass spectra of these charmed baryons. Additionally, we focus on the two-body Okubo-Zweig-Iizuka allowed strong decay behaviors, which plays a crucial role in characterizing the properties of these baryons. Our comprehensive analyses of the mass spectra and two-body Okubo-Zweig-Iizuka allowed decay behaviors provides valuable insights for future experimental investigations. This study significantly contributes to our understandings of the spectroscopic properties of $1F$-wave charmed baryons.Comment: 10 pages, 2 figures, 9 tables. More references added. Accepted by Phys. Rev.

The newly observed Ωc(3327)\Omega_c(3327): A good candidate for a DD-wave charmed baryon

The newly observed $\Omega_c(3327)$ gives us a good chance to construct the $\Omega_c$ charmed baryon family. In this work, we carry out the mass spectrum analysis by a non-relativistic potential model using Gaussian Expansion Method, and the study of its two-body Okubo-Zweig-Iizuka allowed strong decay behavior. Our results imply that the $\Omega_c(3327)$ is good candidate of $\Omega_c(1D)$ state with $J^P=5/2^+$. We also predict the spectroscopy behavior of other $\Omega_c(1D)$ states, which may provide further clues to their search.Comment: 6 pages, 4 tables, 3 figures. Accepted by PR

A new scoring function for top-down spectral deconvolution

BACKGROUND: Top-down mass spectrometry plays an important role in intact protein identification and characterization. Top-down mass spectra are more complex than bottom-up mass spectra because they often contain many isotopomer envelopes from highly charged ions, which may overlap with one another. As a result, spectral deconvolution, which converts a complex top-down mass spectrum into a monoisotopic mass list, is a key step in top-down spectral interpretation. RESULTS: In this paper, we propose a new scoring function, L-score, for evaluating isotopomer envelopes. By combining L-score with MS-Deconv, a new software tool, MS-Deconv+, was developed for top-down spectral deconvolution. Experimental results showed that MS-Deconv+ outperformed existing software tools in top-down spectral deconvolution. CONCLUSIONS: L-score shows high discriminative ability in identification of isotopomer envelopes. Using L-score, MS-Deconv+ reports many correct monoisotopic masses missed by other software tools, which are valuable for proteoform identification and characterization

Systematic Evaluation of Protein Sequence Filtering Algorithms for Proteoform Identification Using Top-Down Mass Spectrometry

Complex proteoforms contain various primary structural alterations resulting from variations in genes, RNA, and proteins. Top-down mass spectrometry is commonly used for analyzing complex proteoforms because it provides whole sequence information of the proteoforms. Proteoform identification by top-down mass spectral database search is a challenging computational problem because the types and/or locations of some alterations in target proteoforms are in general unknown. Although spectral alignment and mass graph alignment algorithms have been proposed for identifying proteoforms with unknown alterations, they are extremely slow to align millions of spectra against tens of thousands of protein sequences in high throughput proteome level analyses. Many software tools in this area combine efficient protein sequence filtering algorithms and spectral alignment algorithms to speed up database search. As a result, the performance of these tools heavily relies on the sensitivity and efficiency of their filtering algorithms. Here, we propose two efficient approximate spectrum-based filtering algorithms for proteoform identification. We evaluated the performances of the proposed algorithms and four existing ones on simulated and real top-down mass spectrometry data sets. Experiments showed that the proposed algorithms outperformed the existing ones for complex proteoform identification. In addition, combining the proposed filtering algorithms and mass graph alignment algorithms identified many proteoforms missed by ProSightPC in proteome-level proteoform analyses

New type of hydrogenlike charm-pion or charm-kaon matter

Borrowing the structures of the hydrogen atom, molecular ion, and diatomic molecule, we predict the nature of a new type of hydrogenlike charm-pion or charm-kaon matter that could be obtained by replacing the proton and electron in hydrogen matter with a charmed meson and a pion or a kaon, respectively. We find that the spectra of the atom, molecular ion, and diatomic molecule can be obtained simultaneously with the Coulomb potential for the hydrogen, the charm-pion, and the charm-kaon systems. The predicted charm-pion matter also allows us to explore the mass shift mediated by the strong interaction. For the charm-pion and charm-kaon systems, the strong interactions could lead to binding energy shifts. Our calculations suggests that the binding energy shifts in charm-pion systems are in the order of several to tens of eV. For the charm-kaon systems, the results are in the order of tens to hundreds of eV. Exploring hydrogenlike charm-pion matter must lead to new demands for high-precision experiments.Comment: 5 pages, 4 figures and 1 table. Typos corrected. Accepted by Phys. Rev.

Universal behavior of mass gaps existing in the single heavy baryon family

The mass gaps existing in the discovered single heavy flavor baryons are analyzed, which show some universal behaviors. Under the framework of a constituent quark model, we quantitatively explain why such interesting phenomenon happens, when these established excited heavy baryons are regarded as the $\lambda$-mode excitations. Based on the universal behaviors of the discussed mass gaps, we may have three implications including the prediction of the masses of excited $\Xi_b^0$ baryons which are still missing in the experiment. For completeness, we also discuss the mass gaps of these $\rho$-mode excited single heavy flavor baryons.Comment: 11 pages, 7 tables and 1 figur

Double-charm heptaquark states composed of two charmed mesons and one nucleon

Inspired by the experimental discoveries of $T_{cc}$, $\Sigma_c(2800)$, and $\Lambda_c(2940)$ and the theoretical picture where they are $DD^*$, $DN$, and $D^*N$ molecular candidates, we investigate the double charm heptaquark system of $DD^*N$. We employ the one-boson-exchange model to deduce the pairwise $D$-$D^*$, $D$-$N$, and $D^*$-$N$ potentials and then study the $DD^*N$ system with the Gaussian expansion method. We find two good hadronic molecular candidates with $I(J^P)=\frac{1}{2}(\frac{1}{2}^-)$ and $\frac{1}{2}(\frac{3}{2}^-)$ $DD^*N$ with only $s$-wave pairwise interactions. The conclusion remains unchanged even taking into account the $S$-$D$ mixing and coupled channel effects. In addition to providing the binding energies, we also calculate the root-mean-square radii of the $DD^*N$ system, which further support the molecular nature of the predicted states. They can be searched for at the upcoming LHC run 3 and run 4.Comment: 9 pages, 4 figures, 2 table

Radiative decays and magnetic moments of the predicted BcB_c-like molecules

In this work, we first perform a systematic study of the transition magnetic moments and the corresponding radiative decay behaviors of the $B_c$-like molecular states associated with their mass spectra, where the constituent quark model is adopted by considering the $S$-$D$ wave mixing effect. Our numerical results show that the radiative decay properties can be considered as the effective physical observable to reflect the inner structures of these $B_c$-like molecular states. Meanwhile, we also discuss the magnetic moments of the $B_c$-like molecular states, and we find that the magnetic moment properties can be used to distinguish the $B_c$-like molecular states from the conventional $B_c$ mesonic states, which have the same quantum numbers and similar masses. We expect that the present study can inspire the interest of experimentalist in exploring the electromagnetic properties of the $B_c$-like molecular states, especially the radiative decay properties.Comment: 13 pages, 8 tables, 1 figur