Additional file 15: of An integrated analysis tool for analyzing hybridization intensities and genotypes using new-generation population-optimized human arrays

Sequence information of the primers used for qPCR. (XLSX 11 kb

Genome-wide single- and multi-locus allelic imbalance analyses – Amplification of both ends of a chromosome but copy-neutral LOH in the middle part of the same chromosome

<p><b>Copyright information:</b></p><p>Taken from "MPDA: Microarray pooled DNA analyzer"</p><p>http://www.biomedcentral.com/1471-2105/9/196</p><p>BMC Bioinformatics 2008;9():196-196.</p><p>Published online 15 Apr 2008</p><p>PMCID:PMC2387178.</p><p></p

Genome-wide single- and multi-locus allelic imbalance analyses – Deletion of a submicroscopic chromosomal region

<p><b>Copyright information:</b></p><p>Taken from "MPDA: Microarray pooled DNA analyzer"</p><p>http://www.biomedcentral.com/1471-2105/9/196</p><p>BMC Bioinformatics 2008;9():196-196.</p><p>Published online 15 Apr 2008</p><p>PMCID:PMC2387178.</p><p></p

Genome-wide single- and multi-locus allelic imbalance analyses – Common deletion of the TCRα/δ locus in three ALL patients

<p><b>Copyright information:</b></p><p>Taken from "MPDA: Microarray pooled DNA analyzer"</p><p>http://www.biomedcentral.com/1471-2105/9/196</p><p>BMC Bioinformatics 2008;9():196-196.</p><p>Published online 15 Apr 2008</p><p>PMCID:PMC2387178.</p><p></p

In each subfigure, the horizontal axis denotes the physical position of the SNP (scale in megabases, Mb) and the vertical axis denotes the estimated CPA in logscale

The three red lines stand for log(CPA) = -1, log(CPA) = 0, and log(CPA) = 1 with respect to the first allele being suppressed twofold compared with the second allele, no relative suppression/amplification, and the first allele being amplified twofold compared with the second allele.<p><b>Copyright information:</b></p><p>Taken from "MPDA: Microarray pooled DNA analyzer"</p><p>http://www.biomedcentral.com/1471-2105/9/196</p><p>BMC Bioinformatics 2008;9():196-196.</p><p>Published online 15 Apr 2008</p><p>PMCID:PMC2387178.</p><p></p

Genome-wide single- and multi-locus allelic imbalance analyses – Trisomy

<p><b>Copyright information:</b></p><p>Taken from "MPDA: Microarray pooled DNA analyzer"</p><p>http://www.biomedcentral.com/1471-2105/9/196</p><p>BMC Bioinformatics 2008;9():196-196.</p><p>Published online 15 Apr 2008</p><p>PMCID:PMC2387178.</p><p></p

Genome-wide single- and multi-locus allelic imbalance analyses – Deletion of a microscopic chromosomal segment

<p><b>Copyright information:</b></p><p>Taken from "MPDA: Microarray pooled DNA analyzer"</p><p>http://www.biomedcentral.com/1471-2105/9/196</p><p>BMC Bioinformatics 2008;9():196-196.</p><p>Published online 15 Apr 2008</p><p>PMCID:PMC2387178.</p><p></p

In each subfigure, the horizontal axis denotes the physical position of SNPs (scale in megabases, Mb), and the vertical axis denotes the estimated AFs from a healthy control

<p><b>Copyright information:</b></p><p>Taken from "MPDA: Microarray pooled DNA analyzer"</p><p>http://www.biomedcentral.com/1471-2105/9/196</p><p>BMC Bioinformatics 2008;9():196-196.</p><p>Published online 15 Apr 2008</p><p>PMCID:PMC2387178.</p><p></p

Predicted haplotype structure for <i>DKK</i>2.

<p>Predicted haplotype structure for <i>DKK</i>2.</p

Additional file 1: of Genome-wide analysis of copy number variations identifies PARK2 as a candidate gene for autism spectrum disorder

The detailed methods of experiments, clinical information and more experimental results. (DOCX 1271 kb