40 research outputs found
Comparison results of NSGL21, IADM MFL, and SLEP.
<p>The x-axes represents the number of iterations and the y-axes represents the relative error.</p
Dynamical Correlation Effects on Photoisomerization: Ab Initio Multiple Spawning Dynamics with MS-CASPT2 for a Model <i>trans</i>-Protonated Schiff Base
We investigate the photoisomerization
of a model retinal protonated
Schiff base (<i>trans</i>-PSB3) using <i>ab initio</i> multiple spawning (AIMS) based on multistate second order perturbation
theory (MSPT2). Discrepancies between the photodynamical mechanism
computed with three-root state-averaged complete active space self-consistent
field (SA-3-CASSCF, which does not include dynamic electron correlation
effects) and MSPT2 show that dynamic correlation is critical in this
photoisomerization reaction. Furthermore, we show that the photodynamics
of <i>trans</i>-PSB3 is not well-described by predictions
based on minimum energy conical intersections (MECIs) or minimum energy
conical intersection (CI) seam paths. Instead, most of the CIs involved
in the photoisomerization are far from MECIs and minimum energy CI
seam paths. Thus, both dynamical nuclear effects and dynamic electron
correlation are critical to understanding the photochemical mechanism
Comparison results of NSGL21 with IADM_MFL and SLEP.
<p>Comparison results of NSGL21 with IADM_MFL and SLEP.</p
Comparison results of NSGL21, IADM MFL, and SLEP.
<p>The x-axes represents the CPU time in seconds and the y-axes represents the relative error.</p
Photodecarbonylation Mechanism of Cyclopropenone in the Gas Phase: Electronic Structure Calculation and AIMS Dynamics Simulation
In this article, structures and energies
of cyclopropenone in the
low-lying electronic states have been determined by the CASSCF and
MS-CASPT2 calculations with different basis sets. Two minimum-energy
conical intersections (CI-1 and CI-2) between S<sub>0</sub> and S<sub>1</sub> were obtained and their topographic characters were characterized
by the SA4-CASÂ(10,9) calculated energy gradients and nonadiabatic
coupling vectors. The AIMS method was used to carry out nonadiabatic
dynamics simulation with ab initio calculation performed at the SA4-CASÂ(10,9)
level. On the basis of time evolution of wave functions simulated
here, the S<sub>1</sub> lifetime is fitted to be 125 fs with a pure
exponential decay for the S<sub>1</sub> electronic population. The
CI-1 intersection is mainly responsible for ultrafast S<sub>1</sub>→S<sub>0</sub> nonadiabatic transition and the photoinduced
decarbonylation is a sequential process, where the first Cî—¸C
bond is broken in the S<sub>1</sub> state and fission of the second
Cî—¸C bond occurs in the S<sub>0</sub> state as a result of the
S<sub>1</sub>→S<sub>0</sub> internal conversion via the CI-1
region. As a minor channel through the CI-2 region, the decarbonylation
proceeds in an asynchronous concerted way. Effects of the S<sub>1</sub> excess energies and the S<sub>1</sub>–S<sub>0</sub> energy
gap on the nonadiabatic dynamics were examined, which reveals that
the S<sub>1</sub>→S<sub>0</sub> nonadiabatic transition occurs
within a small energy gap and high-energy conical intersection regions
can play an important role. The present study provides new insights
into mechanistic photochemistry of cyclopropenones and reveals that
the AIMS dynamics simulation at a high-accuracy ab initio level is
a powerful tool for exploring a mechanism of an ultrafast photochemical
reaction
Efficient Interface for Online Coupling of Capillary Electrophoresis with Inductively Coupled Plasma–Mass Spectrometry and Its Application in Simultaneous Speciation Analysis of Arsenic and Selenium
A simple
and highly efficient online system coupling of capillary
electrophoresis to inductively coupled plasma–mass spectrometry
(CE-ICP-MS) for simultaneous separation and determination of arsenic
and selenium compounds was developed. CE was coupled to an ICP-MS
system by a sprayer with a novel direct-injection high-efficiency
nebulizer (DIHEN) chamber as the interface. By using this interface,
six arsenic species, including arsenite (AsÂ(III), arsenate (AsÂ(V)),
monomethylarsonic acid (MMA), dimethylarsinic acid (DMA), arsenobetaine
(AsB), and arsenocholine (AsC) and five selenium species (such as
sodium selenite (SeÂ(IV)), sodium selenate (SeÂ(VI)), selenocysteine
(SeCys), selenomethionine (SeMet), and Se-methylselenocysteine (MeSeCys))
were baseline-separated and determined in a single run within 9 min
under the optimized conditions. Minimum dead volume, low and steady
sheath flow liquid, high nebulization efficiency, and high sample
transport efficiency were obtained by using this interface. Detection
limits were in the range of 0.11–0.37 μg L<sup>–1</sup> for the six arsenic compounds (determined as <sup>75</sup>As at <i>m</i>/<i>z</i> 75) and 1.33–2.31 μg L<sup>–1</sup> for the five selenium species (determined as <sup>82</sup>Se at <i>m</i>/<i>z</i> 82). Repeatability
expressed as the relative standard deviations (RSD, <i>n</i> = 6) of both migration time and peak area were better than 2.68%
for arsenic compounds and 3.28% for selenium compounds, respectively.
The proposed method had been successfully applied for the determination
of arsenic and selenium species in the certified reference materials
DORM-3, water, urine, and fish samples
The batches of foetal bovine serum tested by real-time RT-PCR.
a<p>Sequence has not been determined.</p
Nonradiative Relaxation of Photoexcited Black Phosphorus Is Reduced by Stacking with MoS<sub>2</sub>: A Time Domain ab Initio Study
Black phosphorus (BP) is an appealing
material for applications
in electronics and optoelectronics because of its tunable direct band
gap and high charge carrier mobility. For real optoelectronic device
utilization, nonradiative electron–hole recombination should
be slow because it constitutes a major pathway for charge and energy
losses. Using time-domain density functional theory combined with
nonadiabatic (NA) molecular dynamics, we show that nonradiative electron–hole
recombination occurs within several tens of picoseconds in bilayer
BP, agreeing well with experimental data. When a single layer of BP
is stacked with monolayer MoS<sub>2</sub>, the recombination is reduced
because of the increased band gap and reduced electron–phonon
NA coupling compared to bilayer BP. The slow electron–phonon
energy losses in BP-MoS<sub>2</sub> van der Waals heterojunction relative
to bilayer BP indicate that rationally stacking BP with other two-dimensional
materials is an attractive route for designing novel and efficient
photovoltaic materials
Neighbor-Joining analysis of a 249-bp fragment of the 5′UTR sequences under Kimura 3-parameter model.
<p>The sequences are labelled with sample ID (-number of clone)/country or region of origin. AU, Australia; BR, Brazil; CA, Canada; CO, Colombia; DK, Denmark; DR, Dominican Republic; EU, European Union; FR, France; MX, Mexico; NI, not identified by supplier; NZ, New Zealand; SA, South American; US, USA; ZA, South Africa. Numbers are percentage of bootstrap values (1000 replicates) for major clades. Bar indicates changes per site. The GenBank accession numbers for reference strains are DQ075210, NC_001461, U97481, AF026781, AB359927, AF049221, AY363096 and FJ493479 for BVDV-1, AY763053 and NC_002032 for BVDV-2, and NC_012812 for BVDV-3.</p
Lewis Base Passivation of Hybrid Halide Perovskites Slows Electron–Hole Recombination: Time-Domain Ab Initio Analysis
Nonradiative electron–hole
recombination plays a key role
in determining photon conversion efficiencies in solar cells. Experiments
demonstrate significant reduction in the recombination rate upon passivation
of methylammonium lead iodide perovskite with Lewis base molecules.
Using nonadiabatic molecular dynamics combined with time-domain density
functional theory, we find that the nonradiative charge recombination
is decelerated by an order of magnitude upon adsorption of the molecules.
Thiophene acts by the traditional passivation mechanism, forcing electron
density away from the surface. In contrast, pyridine localizes the
electron at the surface while leaving it energetically near the conduction
band edge. This is because pyridine creates a stronger coordinative
bond with a lead atom of the perovskite and has a lower energy unoccupied
orbital compared with thiophene due to the more electronegative nitrogen
atom relative to thiophene’s sulfur. Both molecules reduce
two-fold the nonadiabatic coupling and electronic coherence time.
A broad range of vibrational modes couple to the electronic subsystem,
arising from inorganic and organic components. The simulations reveal
the atomistic mechanisms underlying the enhancement of the excited-state
lifetime achieved by the perovskite passivation, rationalize the experimental
results, and advance our understanding of charge-phonon dynamics in
perovskite solar cells