Storm impact on sea surface temperature and chlorophyll α in the Gulf of Mexico and Sargasso Sea based on daily cloud-free satellite data reconstructions

Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 43 (2016): 12,199–12,207, doi:10.1002/2016GL071178.Upper ocean responses to tropical storms/hurricanes have been extensively studied using satellite observations. However, resolving concurrent sea surface temperature (SST) and chlorophyll α (chl α) responses along storm tracks remains a major challenge due to extensive cloud coverage in satellite images. Here we produce daily cloud-free SST and chl α reconstructions based on the Data INterpolating Empirical Orthogonal Function method over a 10 year period (2003–2012) for the Gulf of Mexico and Sargasso Sea regions. Daily reconstructions allow us to characterize and contrast previously obscured subweekly SST and chl α responses to storms in the two main storm-impacted regions of the Atlantic Ocean. Statistical analyses of daily SST and chl α responses revealed regional differences in the response time as well as the response sensitivity to maximum sustained wind speed and translation speed. This study demonstrates that SST and chl α responses clearly depend on regional ocean conditions and are not as universal as might have been previously suggested.Gulf of Mexico Research Initiative/GISR Grant Number: 02-S130202; NOAA Grant Number: NA11NOS0120033; NASA Grant Numbers: NNX12AP84G, NNX13AD80G2017-06-1

Oceanographic and biological influences on recruitment of benthic invertebrates to hard substrata on the Oregon shelf

Author Posting. © The Author(s), 2018. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Estuarine, Coastal and Shelf Science 208 (2018): 1-8, doi:10.1016/j.ecss.2018.04.037.The number of anthropogenic substrata in the ocean – structures like oil rigs and offshore renewable energy generators – is increasing. These structures provide hard-bottom habitat in areas previously dominated by sand or mud, so they have the potential to alter species distributions or serve as “stepping-stones” between other hard-bottom habitats. It is thus important to understand what factors influence the composition and abundance of benthic fauna recruiting at these sites. We examined recruitment to hard substrata (fouling panels) deployed on sand at various distances from a large rocky reef (~60 m isobath) on the southern Oregon coast in 2014 – 2015. Recruitment was dominated by the acorn barnacle Hesperibalanus hesperius. For the majority of the study period in 2014, an anti-cyclonic eddy was present near the deployment sites. However, anomalously high recruitment of H. hesperius during August – early October 2014 coincided with dissipation of the eddy, slower bottom currents, and a positive convergence index, suggesting that H. hesperius larvae from the adjacent area may have been accumulated and retained near our study sites. Other sessile species, including hydroids and bryozoans, recruited to the fouling panels in low abundances, and most of these species have long-range dispersal and fast growth. Mobile invertebrates observed on the fouling panels included gastropods and nudibranchs, most of which also have long-range dispersal and fast growth, and are predators as adults. Thus, a community with two trophic levels assembled on the fouling panels in a relatively short time period (<12 weeks). None of the common hard-bottom species from the adjacent rocky reef recruited to the panels, suggesting that there is a specialized assemblage of species that can exploit hard-bottom habitats surrounded by sandy plains. Our results raise many questions about the influences of dispersal and oceanographic conditions on recruitment to hard substrata.This material is based upon work supported by the National Science Foundation Graduate Research Fellowship Program under Grant No. DGE-0829517. YL is partially supported by the Dr. George Grice Postdoctoral Scholarship from Woods Hole Oceanographic Institution, with support from NSF grant #1634965

Evaluation of agronomic traits in Chinese wild grapes and screening superior accessions for use in a breeding program

This study was conducted to evaluate 15 agronomic traits in 67 accessions of 13 Chinese wild Vitis species. The results have been used to screen superior accessions for grape breeding in the future. Chinese wild Vitis had high diversity in economic traits among the species, such as bud-burst date, blooming date, berry ripening date, bunch weights, berry weights, berry soluble solid contents, berry acid contents, and vine production. Bunch weights of 56 Chinese wild accessions and berry weights of 12 Chinese species (except V. davidii) were much smaller than those of the two European cultivars. In our 25-year of evaluation on disease resistance and economic qualities in this Chinese germplasm, we suggest that V. quinquangularis, V. amurensis, V. yeshanensis, V. romanetii, and certain accessions in V. liubanensis be the first potential materials chosen for breeding.

Relatedness of resistance to anthracnose and to white rot in Chinese wild grapes

Resistance to anthracnose and to white rot in 56 accessions of 13 Chinese wild Vitis species, V. amurensis, V. quinquangularis, V. romanetii, V. adstricta, V. pseudoreticulata, V. piazezkii, V. davidii, V. davidii var. cyanocarpa, V. liubanensis, V. qinlingensis, V. bashanica, V. yeshanensis and V. hankockii was evaluated under natural conditions in 1996-1998. All 56 accessions and the 13 species showed resistance to anthracnose. All nine accessions of V. quinquangularis, and one accession each of V. romanetii, V. adstricta and V. pseudoreticulata exhibited susceptibility to white rot; the remaining 44 accessions (78.57 %) and the other 9 species presented resistant to grape white rot. Two V. vinifera cultivars (‘Cabernet Sauvignon’ and ‘Chardonnay’) were susceptible to anthracnose and highly susceptible to white rot. The r-value of susceptibility indices between anthracnose and white rot in the 56 accessions is insignificant. In Chinese wild grapes, the mechanisms for producing resistance to both diseases would be very different, but inheritance of resistance to these two diseases in a certain cross is somewhat related by molecular data.

Variational data assimilative modeling of the Gulf of Maine in spring and summer 2010

Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 120 (2015): 3522–3541, doi:10.1002/2014JC010492.A data assimilative ocean circulation model is used to hindcast the Gulf of Maine [GOM) circulation in spring and summer 2010. Using the recently developed incremental strong constraint 4D Variational data assimilation algorithm, the model assimilates satellite sea surface temperature and in situ temperature and salinity profiles measured by expendable bathythermograph, Argo floats, and shipboard CTD casts. Validation against independent observations shows that the model skill is significantly improved after data assimilation. The data-assimilative model hindcast reproduces the temporal and spatial evolution of the ocean state, showing that a sea level depression southwest of the Scotian Shelf played a critical role in shaping the gulf-wide circulation. Heat budget analysis further demonstrates that both advection and surface heat flux contribute to temperature variability. The estimated time scale for coastal water to travel from the Scotian Shelf to the Jordan Basin is around 60 days, which is consistent with previous estimates based on in situ observations. Our study highlights the importance of resolving upstream and offshore forcing conditions in predicting the coastal circulation in the GOM.Research support was provided by National Oceanic and Atmospheric Administration (NOAA) grant NA06NOS4780245 for the Gulf of Maine Toxicity (GOMTOX) program. RH and DJM were also supported by NOAA grant NA11NOS4780023 under the PCMHAB program. YL was partly supported by Postdoctoral Scholar Program at the Woods Hole Oceanographic Institution, with funding provided by the George D. Grice Postdoctoral Scholarship.2015-11-1

A novel method to determine droop coefficients of DC voltage control for VSC-MTDC system

For droop control in voltage source converter based multi-terminal HVDC systems, the determination of droop coefficients is a key issue, which directly affects both power distribution and DC control performances. This paper proposes a novel design of droop coefficients considering the requirements of power distribution, DC voltage control and system stability. Considering the power margins of different converters, the ratio relationship among droop coefficients is established. Converters with larger power margins take bigger portion of power mismatch to avoid overload problem. Furthermore, the integral square error of converters DC voltage is adopted as the DC voltage control performance index, and optimization of droop coefficients to achieve coordinated DC voltage control of steady-state deviation and transient variation, is derived. Finally, the constraint of droop coefficients is established to guarantee the DC system stability after power disturbance. Case studies are conducted on the Nordic 32 system with an embedded 4-terminal DC grid to demonstrate the feasibility and effectiveness of the proposed droop control scheme

PU.1 controls the expression of long noncoding RNA HOTAIRM1 during granulocytic differentiation

Abstract Background Long noncoding RNA HOX antisense intergenic RNA myeloid 1 (HOTAIRM1) has been characterized as a critical factor in all-trans retinoic acid (ATRA)-induced differentiation of acute promyelocytic leukemia (APL) cells. However, the essential transcription factor for gene expression of HOTAIRM1 is still unknown. Findings Chromatin immunoprecipitation (ChIP) assays revealed that PU.1 constitutively bound to the regulatory region of HOTAIRM1. Co-expression of PU.1 led to the transactivation of the regulatory region of HOTAIRM1 in a reporter assay. Detailed analysis showed that two PU.1 motifs, which were located around +1100 bp downstream of the transcriptional start site of the HOTAIRM1 promoter, were responsible for the PU.1-dependent transactivation. The induction of HOTAIRM1 by ATRA was dependent on PU.1, and ectopic expression of PU.1 significantly up-regulated HOTAIRM1. Furthermore, low HOTAIRM1 expression was observed in APL cells, which was attributed to the reduced PU.1 expression rather than the repression by PML-RARα via the direct binding. Conclusion PU.1 directly activates the expression of HOTAIRM1 through binding to the regulatory region of HOTAIRM1 during granulocytic differentiation. The reduced PU.1 expression, rather than PML-RARα itself, results in the low expression of HOTAIRM1 in APL cells. Our findings enrich the knowledge on the regulation of lncRNAs and the underlying mechanisms of the abnormal expression of lncRNAs involved in APL

Dynamics of an intense Alexandrium catenella red tide in the Gulf of Maine: satellite observations and numerical modeling

© The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Li, Y., Stumpf, R. P., McGillicuddy, D. J.,Jr, & He, R. Dynamics of an intense Alexandrium catenella red tide in the Gulf of Maine: satellite observations and numerical modeling. Harmful Algae, 99, (2020): 101927, doi:10.1016/j.hal.2020.101927.In July 2009, an unusually intense bloom of the toxic dinoflagellate Alexandrium catenella occurred in the Gulf of Maine. The bloom reached high concentrations (from hundreds of thousands to one million cells L−1) that discolored the water and exceeded normal bloom concentrations by a factor of 1000. Using Medium Resolution Imaging Spectrometer (MERIS) imagery processed to target chlorophyll concentrations (>2 µg L−1), patches of intense A. catenella concentration were identified that were consistent with the highly localized cell concentrations observed from ship surveys. The bloom patches were generally aligned with the edge of coastal waters with high-absorption. Dense bloom patches moved onshore in response to a downwelling event, persisted for approximately one week, then dispersed rapidly over a few days and did not reappear. Coupled physical-biological model simulations showed that wind forcing was an important factor in transporting cells onshore. Upward swimming behavior facilitated the horizontal cell aggregation, increasing the simulated maximum depth-integrated cell concentration by up to a factor of 40. Vertical convergence of cells, due to active swimming of A. catenella from the subsurface to the top layer, could explain the additional 25-fold intensification (25 × 40=1000-fold) needed to reach the bloom concentrations that discolored the water. A model simulation that considered upward swimming overestimated cell concentrations downstream of the intense aggregation. This discrepancy between model and observed concentrations suggested a loss of cells from the water column at a time that corresponded to the start of encystment. These results indicated that the joint effect of upward swimming, horizontal convergence, and wind-driven flow contributed to the red water event, which might have promoted the sexual reproduction event that preceded the encystment process.DJM gratefully acknowledges support of the Woods Hole Center for Oceans and Human Health, funded jointly by the National Science Foundation (OCE-1314642 and OCE-1840381) the National Institute of Environmental Health Sciences (P01ES021923–01 and P01 ES028938–01). RH acknowledges support made possible by NOAA grant NA15NOS4780196 and NA16NOS0120028

Processes influencing formation of low-salinity high-biomass lenses near the edge of the Ross Ice Shelf

© The Author(s), 2016. This is the author's version of the work and is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Journal of Marine Systems 166 (2017): 108-119, doi:10.1016/j.jmarsys.2016.07.002.Both remotely sensed and in situ observations in austral summer of early 2012 in the Ross Sea suggest the presence of cold, low-salinity, and high-biomass eddies along the edge of the Ross Ice Shelf (RIS). Satellite measurements include sea surface temperature and ocean color, and shipboard data sets include hydrographic profiles, towed instrumentation, and underway acoustic Doppler current profilers. Idealized model simulations are utilized to examine the processes responsible for ice shelf eddy formation. 3-D model simulations produce similar cold and fresh eddies, although the simulated vertical lenses are quantitatively thinner than observed. Model sensitivity tests show that both basal melting underneath the ice shelf and irregularity of the ice shelf edge facilitate generation of cold and fresh eddies. 2-D model simulations further suggest that both basal melting and downwelling-favorable winds play crucial roles in forming a thick layer of low-salinity water observed along the edge of the RIS. These properties may have been entrained into the observed eddies, whereas that entrainment process was not captured in the specific eddy formation events studied in our 3-D model—which may explain the discrepancy between the simulated and observed eddies, at least in part. Additional sensitivity experiments imply that uncertainties associated with background stratification and wind stress may also explain why the model underestimates the thickness of the low-salinity lens in the eddy interiors. Our study highlights the importance of incorporating accurate wind forcing, basal melting, and ice shelf irregularity for simulating eddy formation near the RIS edge. The processes responsible for generating the high phytoplankton biomass inside these eddies remain to be elucidated.YL is supported by the Postdoctoral Scholarship Program at Woods Hole Oceanographic Institution, with funding provided by the Dr. George D. Grice Postdoctoral Scholarship.2018-07-0