12 research outputs found

    Examples of pyrograms.

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    <p>A) <i>LINE-1</i>, B) <i>Alu</i>, C) <i>p16</i>, and D) <i>p53</i>.</p

    Localization of gene promoters and regions amplified and of the CpG dinucleotide positions at which DNA methylation was quantified.

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    <p>Localization of gene promoters and regions amplified and of the CpG dinucleotide positions at which DNA methylation was quantified.</p

    Correlations of intraclass correlation coefficients (ICCs) with DNA methylation levels and genomic characteristics of the sequences analyzed.

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    <p>The panels show correlations of ICCs for each of the methylation biomarkers with content of guanosine and cytosine (G+C, panel A); ratio of observed/expected CpG dinucleotides (CpG o/e; panel B); distance of repeat elements from 3′ (panel C); distance of repeat elements from 5′ (panel D); DNA methylation mean on Day 1 (panel E); range of DNA methylation on Day 1 (panel F). The scatter plots use ICC values subtracted of pyrosequencing measurement errors (ICC<sub>1</sub>) and estimated from models adjusted by PM<sub>10</sub> exposure levels, age, current smoking, and percent blood granulocytes. Each data point corresponds to the ICC<sub>1</sub> value for one biomarker, as indicated by the corresponding label.</p

    Sequence characteristics of the DNA methylation markers analyzed.

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    *<p><i>Alu</i> and LINE-1 were not considered, as repeat elements have multiple locations across the human genome with different context sequence characteristics.</p
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