Unraveling the Molecular Structures of Asphaltenes by Atomic Force Microscopy

Petroleum is one of the most precious and complex molecular mixtures existing. Because of its chemical complexity, the solid component of crude oil, the asphaltenes, poses an exceptional challenge for structure analysis, with tremendous economic relevance. Here, we combine atomic-resolution imaging using atomic force microscopy and molecular orbital imaging using scanning tunnelling microscopy to study more than 100 asphaltene molecules. The complexity and range of asphaltene polycyclic aromatic hydrocarbons are established in detail. Identifying molecular structures provides a foundation to understand all aspects of petroleum science from colloidal structure and interfacial interactions to petroleum thermodynamics, enabling a first-principles approach to optimize resource utilization. Particularly, the findings contribute to a long-standing debate about asphaltene molecular architecture. Our technique constitutes a paradigm shift for the analysis of complex molecular mixtures, with possible applications in molecular electronics, organic light emitting diodes, and photovoltaic devices

Synthesis of a Naphthodiazaborinine and Its Verification by Planarization with Atomic Force Microscopy

Aiming to study new motifs, potentially active as functional materials, we performed the synthesis of a naphthodiazaborinine (the BN isostere of the phenalenyl anion) that is bonded to a hindered di-ortho-substituted aryl system (9-anthracene). We used atomic force microscopy (AFM) and succeeded in both the verification of the original nonplanar structure of the molecule and the planarization of the skeleton by removing H atoms that cause steric hindrance. This study demonstrated that planarization by atomic manipulation is a possible route for extending molecular identification by AFM to nonplanar molecular systems that are difficult to probe with AFM directly

The Electric Field of CO Tips and Its Relevance for Atomic Force Microscopy

Metal tips decorated with CO molecules have paved the way for an impressively high resolution in atomic force microscopy (AFM). Although Pauli repulsion and the associated CO tilting play a dominant role at short distances, experiments on polar and metallic systems show that electrostatic interactions are necessary to understand the complex contrast observed and its distance evolution. Attempts to describe those interactions in terms of a single electrostatic dipole replacing the tip have led to contradictory statements about its nature and strength. Here, we solve this puzzle with a comprehensive experimental and theoretical characterization of the AFM contrast on Cl vacancies. Our model, based on density functional theory (DFT) calculations, reproduces the complex evolution of the contrast between both the Na cation and Cl anion sites, and the positively charged vacancy as a function of tip height, and highlights the key contribution of electrostatic interactions for tip–sample distances larger than 500 pm. For smaller separations, Pauli repulsion and the associated CO tilting start to dominate the contrast. The electrostatic field of the CO–metal tip can be represented by the superposition of the fields from the metal tip and the CO molecule. The long-range behavior is defined by the metal tip that contributes the field of a dipole with its positive pole at the apex. At short-range, the CO exhibits an opposite field that prevails. The interplay of these fields, with opposite sign and rather different spatial extension, is crucial to describe the contrast evolution as a function of the tip height

Generation and Characterization of a <i>meta</i>-Aryne on Cu and NaCl Surfaces

We describe the generation of a <i>meta</i>-aryne at low temperature (<i>T</i> = 5 K) using atomic manipulation on Cu(111) and on bilayer NaCl on Cu(111). We observe different voltage thresholds for dehalogenation of the precursor and different reaction products depending on the substrate surface. The chemical structure is resolved by atomic force microscopy with CO-terminated tips, revealing the radical positions and confirming a diradical rather than an anti-Bredt olefin structure for this <i>meta</i>-aryne on NaCl

Tetracene Formation by On-Surface Reduction

We present the on-surface reduction of diepoxytetracenes to form genuine tetracene on Cu(111). The conversion is achieved by scanning tunneling microscopy (STM) tip-induced manipulation as well as thermal activation and is conclusively demonstrated by means of atomic force microscopy (AFM) with atomic resolution. We observe that the metallic surface plays an important role in the deoxygenation and for the planarization after bond cleavage

Heavy Oil Based Mixtures of Different Origins and Treatments Studied by Atomic Force Microscopy

Heavy oil molecular mixtures were investigated on the basis of single molecules resolved by atomic force microscopy. The eight different samples analyzed include asphaltenes and other heavy oil fractions of different geographic/geologic origin and processing steps applied. The collected AFM data of individual molecules provide information about the molecular geometry, aromaticity, the content of nonhexagonal rings, typical types and locations of heterocycles, occurrence, length and connectivity of alkyl side chains, and ratio of archipelago- vs island-type architectures. Common and distinguishing structural motifs for the different samples could be identified. The measured size distributions and the degree of unsaturation by scanning probe microscopy is consistent with mass spectrometry data presented herein. The results obtained reveal the complexity, properties and specifics of heavy oil fractions with implications for upstream oil production and downstream oil processing. Moreover, the identified molecular structures form a basis for modeling geochemical oil formation processes