Simulated size and power study based on normal distribution for .

<p>Simulated size and power study based on normal distribution for .</p

Simulated size and power study based on the mixed distribution for .

<p>Simulated size and power study based on the mixed distribution for .</p

EasyGO analysis of the genes up-regulated in <i>A. thaliana</i> after 24 h of volatile treatment.

<p>The right panel lists gene information for the six innate immune response genes evaluated. Red, response to ET; blue, response to JA.</p

Transcriptional responses of <i>A. thaliana</i> to Lima bean volatiles after 24 h and 48 h of treatment.

<p>(A) Cluster analysis of the regulated genes in <i>A. thaliana</i> primed by volatiles from second instar larvae-damaged Lima beans. (B) GO enrichment analysis showing the differential expression of genes in <i>A. thaliana</i> (<i>p</i><0.01). Values higher than zero on the <i>y</i>-axis refer to up-regulated genes, whereas those lower than zero refer to down-regulated ones. The GO terms were chosen at the third level.</p

Simulated power study based on exponential distribution for .

<p>Simulated power study based on exponential distribution for .</p

Responses of wild-type as well as <i>coi1-2</i> and <i>ein2-1</i> mutant <i>A. thaliana</i> to the volatiles.

<p>Expression patterns of 37 selected genes in the wild-type as well as <i>coi1-2</i> and <i>ein2-1</i> mutant <i>A. thaliana</i> plants after 24 or 48 h of treatment with volatiles from leafminer-infested Lima beans are shown. (A) Response of wild-type <i>A. thaliana</i> after 24 h of treatment with volatiles from leafminer-infested Lima beans. (B) Response of wild-type <i>A. thaliana</i> after 48 h of treatment with volatiles from leafminer-infested Lima beans. (C) Response of <i>coi1-2 A. thaliana</i> after 24 h of treatment with volatiles from leafminer-infested Lima beans. (D) Response of <i>coi1-2 A. thaliana</i> after 48 h of treatment with volatiles from leafminer-infested Lima beans. (E) Response of <i>ein2-1 A. thaliana</i> after 24 h of treatment with volatiles from leafminer-infested Lima beans. (F) Response of <i>ein2-1 A. thaliana</i> after 48 h of treatment with volatiles from leafminer-infested Lima beans.</p

Comparison of primer effects between synthetic chemicals and Lima bean volatiles.

<p>Hierarchical clustering of the expression patterns of selected genes in <i>A. thaliana</i> treated with synthetic chemicals and Lima bean volatiles (24 or 48 h). The blue area represents the cluster of genes similarly affected by the 24 h treatment with Lima bean volatiles; pink area, cluster of genes similarly affected by the 48 h treatment; green, cluster of Lima bean volatiles; gray, cluster of healthy control plants. The clustering results along the <i>y</i>-axis of the color matrix reveal six categories of genes (A–F) showing similar reactions among the variety of treatments.</p

Simulated size and power study based on t distribution with with df = 3 of the form for .

<p>Simulated size and power study based on t distribution with with df = 3 of the form for .</p

The cumulative distribution function based on the asymptotic distribution, and based on the Monte Carlo simulation based exact distribution for .

<p>The cumulative distribution function based on the asymptotic distribution, and based on the Monte Carlo simulation based exact distribution for .</p

Comparison of the genomic responses in <i>A. thaliana</i> after treatment with HIPVs and leafminer feeding.

<p>Comparison of the genomic responses in <i>A. thaliana</i> after treatment with HIPVs and leafminer feeding.</p