335 research outputs found
The Blessed Virgin at the Council
Rene Laurentin, an internationally renowned contemporary Mariologist, during his recent visit to our campus as recipient of the Marianist Award, presented this paper summarizing his impressions of the Marian aspects of the Second Vatican Council. Readers will undoubtedly find it as plainspoken as did his listeners
Genetic relationship and diversity in a sesame (Sesamum indicum L.) germplasm collection using amplified fragment length polymorphism (AFLP)
BACKGROUND: Sesame is an important oil crop in tropical and subtropical areas. Despite its nutritional value and historic and cultural importance, the research on sesame has been scarce, particularly as far as its genetic diversity is concerned. The aims of the present study were to clarify genetic relationships among 32 sesame accessions from the Venezuelan Germplasm Collection, which represents genotypes from five diversity centres (India, Africa, China-Korea-Japan, Central Asia and Western Asia), and to determine the association between geographical origin and genetic diversity using amplified fragment length polymorphism (AFLP). RESULTS: Large genetic variability was found within the germplasm collection. A total of 457 AFLP markers were recorded, 93 % of them being polymorphic. The Jaccard similarity coefficient ranged from 0.38 to 0.85 between pairs of accessions. The UPGMA dendrogram grouped 25 of 32 accessions in two robust clusters, but it has not revealed any association between genotype and geographical origin. Indian, African and Chinese-Korean-Japanese accessions were distributed throughout the dendrogram. A similar pattern was obtained using principal coordinates analysis. Genetic diversity studies considering five groups of accessions according to the geographic origin detected that only 20 % of the total diversity was due to diversity among groups using Nei's coefficient of population differentiation. Similarly, only 5% of the total diversity was attributed to differences among groups by the analysis of molecular variance (AMOVA). This small but significant difference was explained by the fact that the Central Asia group had a lower genetic variation than the other diversity centres studied. CONCLUSION: We found that our sesame collection was genetically very variable and did not show an association between geographical origin and AFLP patterns. This result suggests that there was considerable gene flow among diversity centres. Future germplasm collection strategies should focus on sampling a large number of plants. Covering many diversity centres is less important because each centre represents a major part of the total diversity in sesame, Central Asia centre being the only exception. The same recommendation holds for the choice of parents for segregant populations used in breeding projects. The traditional assumption that selecting genotypes of different geographical origin will maximize the diversity available to a breeding project does not hold in sesame
Relationship between metabolic and genomic diversity in sesame (Sesamum indicum L.)
Background: Diversity estimates in cultivated plants provide a rationale for
conservation strategies and support the selection of starting material for
breeding programs. Diversity measures applied to crops usually have been
limited to the assessment of genome polymorphism at the DNA level.
Occasionally, selected morphological features are recorded and the content of
key chemical constituents determined, but unbiased and comprehensive chemical
phenotypes have not been included systematically in diversity surveys. Our
objective in this study was to assess metabolic diversity in sesame by
nontargeted metabolic profiling and elucidate the relationship between
metabolic and genome diversity in this crop. Results: Ten sesame accessions
were selected that represent most of the genome diversity of sesame grown in
India, Western Asia, Sudan and Venezuela based on previous AFLP studies.
Ethanolic seed extracts were separated by HPLC, metabolites were ionized by
positive and negative electrospray and ions were detected with an ion trap mass
spectrometer in full-scan mode for m/z from 50 to 1000. Genome diversity was
determined by Amplified Fragment Length Polymorphism (AFLP) using eight primer
pair combinations. The relationship between biodiversity at the genome and at
the metabolome levels was assessed by correlation analysis and multivariate
statistics. Conclusion: Patterns of diversity at the genomic and metabolic
levels differed, indicating that selection played a significant role in the
evolution of metabolic diversity in sesame. This result implies that when used
for the selection of genotypes in breeding and conservation, diversity
assessment based on neutral DNA markers should be complemented with metabolic
profiles. We hypothesize that this applies to all crops with a long history of
domestication that possess commercially relevant traits affected by chemical
phenotypes
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