Kinetic Monte Carlo Modelling to Study Diffusion in Zeolite. Understanding the Impact of Dual Site Isotherm on the Loading Dependence of n-Hexane and n-Heptane Diffusivities in MFI Zeolite, as Revealed by QENS Experiments

ENERGIE:MATERIAUX+HJO:NLAInternational audienceThis study concerns the diffusion of single-component molecules in zeolites, characterised by an isotherm represented by a dual-site Langmuir model with a point of inflection. The systems investigated are n-hexane and n-heptane in MFI zeolite at 300 K. Experiments conducted using the Quasi-Elastic Neutron Scattering (QENS) technique have demonstrated that this inflection has an impact on the loading dependence of the transport Dt and corrected DC diffusion coefficients of these systems. The results of these experiments are described here. A Kinetic Monte Carlo study is then conducted, showing how the energy levels of the molecule adsorption sites in a zeolite affect the loading dependence of the diffusion coefficients of these molecules

Extracellular compounds produced by fungi associated with Botryosphaeria dieback induce differential defence gene expression patterns and necrosis in Vitis vinifera cv. Chardonnay cells

Three major grapevine trunk diseases, esca, botryosphaeria dieback and eutypa dieback, pose important economic problems for vineyards worldwide, and currently, no efficient treatment is available to control these diseases. The different fungi associated with grapevine trunk diseases can be isolated in the necrotic wood, but not in the symptomatic leaves. Other factors seem to be responsible for the foliar symptoms and may represent the link between wood and foliar symptoms. One hypothesis is that the extracellular compounds produced by the fungi associated with grapevine trunk diseases are responsible for pathogenicity. In the present work, we used Vitis vinifera cv. Chardonnay cells to test the aggressiveness of total extracellular compounds produced by Diplodia seriata and Neofusicoccum parvum, two causal agents associated with botryosphaeria dieback. Additionally, the toxicity of purified mellein, a characteristic toxin present in the extracellular compounds of Botryosphaeriaceae, was assessed. Our results show that the total extracellular compounds produced by N. parvum induce more necrosis on Chardonnay calli and induce a different defence gene expression pattern than those of D. seriata. Mellein was produced by both fungi in amounts proportional to its aggressiveness. However, when purified mellein was added to the culture medium of calli, only a delayed necrosis and a lower-level expression of defence genes were observed. Extracellular compounds seem to be involved in the pathogenicity of the fungi associated with botryosphaeria dieback. However, the doses of mellein used in this study are 100 times higher than those found in the liquid fungal cultures: therefore, the possible function of this toxin is discussed

Kinetic Monte Carlo study of binary diffusion in silicalite

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Kinetic Monte Carlo study of binary diffusion in silicalite

International audienceWe report a Kinetic Monte Carlo (KMC) study of the diffusion of linear n-hexane (nC6) and 2,2-dimethylbutane (22DMB) mixture in zeolite silicalite. We first investigated the loading dependences of single component self- and corrected diffusivities of nC6 at 300 K. Anisotropic transition rates are implemented to account for the distribution of the molecules within the zeolite framework. Repulsive guest-guest interactions are modeled using the parameter introduced by Reed and Ehrlich (Surf. Sci. 102:588–601, 1981). The results are in good agreement with recent experimental Quasi Elastic Neutron Scattering data of Jobic et al. (J. Phys. Chem. B 110:2195–2201, 2006), although the influence of the adsorption isotherm inflection is not reproduced. The binary diffusion study of nC6/22DMB mixtures was performed by implementing the nC6 transition rates used for the single component study while 22DMB molecules propagate via intersection-intersection hops. This KMC model allows for different saturation capacities and accounts for interactions between molecules by introducing f ij parameters. Results show the large impact of guest-guest interactions between nC6 and 22DMB on both self- and corrected diffusivities of the two components. Molecule-size effects are found to be predominant near 22DMB saturation capacity. Acceleration/deceleration effects already described in the literature are confirmed

Influence of Isotherm Inflection on the Loading Dependence of the Diffusivities of n-Hexane and n-Heptane in MFI Zeolite. Quasi-Elastic Neutron Scattering Experiments Supplemented by Molecular Simulations

Quasi-Elastic Neutron Scattering (QENS) experiments were carried out to determine (a) Fick diffusivity, D (b) self-diffusivity, D<SUB>self</SUB>, and (c) 1/Γ, the inverse of the thermodynamic correction factor, for n-hexane (nC6) and n-heptane (nC7) in MFI zeolite (all silica silicalite-1) at 300 κ for a variety of loadings. These experimental results are compared with configurational-bias Monte Carlo (CBMC) and molecular dynamics (MD) simulations of, respectively, the adsorption isotherms and diffusivities. For n-hexane, the CBMC simulated isotherm shows a slight inflection at a loading ϑ = 4 molecules per unit cell; this inflection manifests, also, in the loading dependence of 1/Γ, obtained from QENS. The trend in the loading dependence of the Fick D and D<SUB>self</SUB> of nC6 obtained from QENS matches the MD simulation results. For nC7 the CBMC simulated isotherm shows a strong inflection at a loading ϑ = 4 molecules per unit cell. At this loading ϑ = 4, 1/Γ tends to zero and there is a very good match between QENS and molecular simulations for the loading dependence of 1/Γ. Both MD simulations and QENS data on the Fick diffusivity shows a sharp maximum at a loading in the region of ϑ = 4. For both nC6 and nC7 the simulated values of diffusivity are about an order of magnitude higher than those determined from QENS