The promise and pitfalls of β-diversity in ecology and conservation

A key challenge in ecology and conservation is to determine how processes at different scales create variation in community composition (β-diversity). In this issue, Oldén & Halme show that grazers increase β-diversity through multiple processes at different scales. We discuss how β-diversity can elucidate fundamental processes of community assembly, challenges in linking processes to patterns, and unresolved questions across scales

Integrating species traits into species pools

Despite decades of research on the species‐pool concept and the recent explosion of interest in trait‐based frameworks in ecology and biogeography, surprisingly little is known about how spatial and temporal changes in species‐pool functional diversity (SPFD) influence biodiversity and the processes underlying community assembly. Current trait‐based frameworks focus primarily on community assembly from a static regional species pool, without considering how spatial or temporal variation in SPFD alters the relative importance of deterministic and stochastic assembly processes. Likewise, species‐pool concepts primarily focus on how the number of species in the species pool influences local biodiversity. However, species pools with similar richness can vary substantially in functional‐trait diversity, which can strongly influence community assembly and biodiversity responses to environmental change. Here, we integrate recent advances in community ecology, trait‐based ecology, and biogeography to provide a more comprehensive framework that explicitly considers how variation in SPFD, among regions and within regions through time, influences the relative importance of community assembly processes and patterns of biodiversity. First, we provide a brief overview of the primary ecological and evolutionary processes that create differences in SPFD among regions and within regions through time. We then illustrate how SPFD may influence fundamental processes of local community assembly (dispersal, ecological drift, niche selection). Higher SPFD may increase the relative importance of deterministic community assembly when greater functional diversity in the species pool increases niche selection across environmental gradients. In contrast, lower SPFD may increase the relative importance of stochastic community assembly when high functional redundancy in the species pool increases the influence of dispersal history or ecological drift. Next, we outline experimental and observational approaches for testing the influence of SPFD on assembly processes and biodiversity. Finally, we highlight applications of this framework for restoration and conservation. This species‐pool functional diversity framework has the potential to advance our understanding of how local‐ and regional‐scale processes jointly influence patterns of biodiversity across biogeographic regions, changes in biodiversity within regions over time, and restoration outcomes and conservation efforts in ecosystems altered by environmental change

Local Species Diversity, Β-Diversity and Climate Influence the Regional Stability of Bird Biomass Across North America

Biodiversity often stabilizes aggregate ecosystem properties (e.g. biomass) at small spatial scales. However, the importance of species diversity within communities and variation in species composition among communities (β-diversity) for stability at larger scales remains unclear. Using a continental-scale analysis of 1657 North American breeding-bird communities spanning 20-years and 35 ecoregions, we show local species diversity and β-diversity influence two components of regional stability: local stability (stability of bird biomass within sites) and spatial asynchrony (asynchronous fluctuations in biomass among sites). We found spatial asynchrony explained three times more variation in regional stability of bird biomass than did local stability. This result contrasts with studies at smaller spatial scales—typically plant metacommunities under 1 ha—that find local stability to be more important than spatial asynchrony. Moreover, spatial asynchrony of bird biomass increased with bird β-diversity and climate heterogeneity (temperature and precipitation), while local stability increased with species diversity. Our study reveals new insights into the scale-dependent processes regulating ecosystem stability, providing evidence that both local biodiversity loss and homogenization can destabilize ecosystem processes at biogeographic scales

Impacts of Aspen and Conifer Vegetation on Predation Risk and Distributions of Bird Species

Aspen forests are in decline around the globe and are largely being replaced by conifers.  Associated with this shift in forest composition, we document an increase in nest predation risk and decrease in abundance of bird species that breed in aspens.  These observational data from 5 years across 19 forest stands in western Montana were verified with an adaptive management experiment removing all conifers from three large aspen stands in the Mt. Haggin WMA.  This landscape-scale approach strongly supports the active management of aspen stands, by such methods as removing conifers, to improve breeding bird habitat.  Our results also suggest that vegetation-mediated effects of predation are associated with avian distributions and species turnover

Negative density dependence mediates biodiversity–productivity relationships across scales

Regional species diversity generally increases with primary productivity whereas local diversity–productivity relationships are highly variable. This scale-dependence of the biodiversity–productivity relationship highlights the importance of understanding the mechanisms that govern variation in species composition among local communities, which is known as β-diversity. Hypotheses to explain changes in β-diversity with productivity invoke multiple mechanisms operating at local and regional scales, but the relative importance of these mechanisms is unknown. Here we show that changes in the strength of local density-dependent interactions within and among tree species explain changes in β-diversity across a subcontinental-productivity gradient. Stronger conspecific relative to heterospecific negative density dependence in more productive regions was associated with higher local diversity, weaker habitat partitioning (less species sorting), and homogenization of community composition among sites (lower β-diversity). Regional processes associated with changes in species pools had limited effects on β-diversity. Our study suggests that systematic shifts in the strength of local interactions within and among species might generally contribute to some of the most prominent but poorly understood gradients in global biodiversity

Tree Species Diversity Increases with Conspecific Negative Density Dependence Across an Elevation Gradient

Elevational and latitudinal gradients in species diversity may be mediated by biotic interactions that cause density-dependent effects of conspecifics on survival or growth to differ from effects of heterospecifics (i.e. conspecific density dependence), but limited evidence exists to support this. We tested the hypothesis that conspecific density dependence varies with elevation using over 40 years of data on tree survival and growth from 23 old-growth temperate forest stands across a 1,000-m elevation gradient. We found that conspecific-density-dependent effects on survival of small-to-intermediate-sized focal trees were negative in lower elevation, higher diversity forest stands typically characterised by warmer temperatures and greater relative humidity. Conspecific-density-dependent effects on survival were less negative in higher elevation stands and ridges than in lower elevation stands and valley bottoms for small-to-intermediate-sized trees, but were neutral for larger trees across elevations. Conspecific-density-dependent effects on growth were negative across all tree size classes and elevations. These findings reveal fundamental differences in biotic interactions that may contribute to relationships between species diversity, elevation and climate

Bird species turnover is related to changing predation risk along a vegetation gradient

Abstract. Turnover in animal species along vegetation gradients is often assumed to reflect adaptive habitat preferences that are narrower than the full gradient. Specifically, animals may decline in abundance where their reproductive success is low, and these poorquality locations differ among species. Yet habitat use does not always appear adaptive. The crucial tests of how abundances and demographic costs of animals vary along experimentally manipulated vegetation gradients are lacking. We examined habitat use and nest predation rates for 16 bird species that exhibited turnover with shifts in deciduous and coniferous vegetation. For most bird species, decreasing abundance was associated with increasing predation rates along both natural and experimentally modified vegetation gradients. This landscape-scale approach strongly supports the idea that vegetation-mediated effects of predation are associated with animal distributions and species turnover

Infrared Spectral Energy Distributions of Nearby Galaxies

The Spitzer Infrared Nearby Galaxies Survey (SINGS) is carrying out a comprehensive multi-wavelength survey on a sample of 75 nearby galaxies. The 1-850um spectral energy distributions are presented using broadband imaging data from Spitzer, 2MASS, ISO, IRAS, and SCUBA. The infrared colors derived from the globally-integrated Spitzer data are generally consistent with the previous generation of models that were developed based on global data for normal star-forming galaxies, though significant deviations are observed. Spitzer's excellent sensitivity and resolution also allow a detailed investigation of the infrared spectral energy distributions for various locations within the three large, nearby galaxies NGC3031 (M81), NGC5194 (M51), and NGC7331. Strong correlations exist between the local star formation rate and the infrared colors f_nu(70um)/f_nu(160um) and f_nu(24um)/f_nu(160um), suggesting that the 24 and 70um emission are useful tracers of the local star formation activity level. Preliminary evidence indicates that variations in the 24um emission, and not variations in the emission from polycyclic aromatic hydrocarbons at 8um, drive the variations in the f_nu(8.0um)/f_nu(24um) colors within NGC3031, NGC5194, and NGC7331. If the galaxy-to-galaxy variations in spectral energy distributions seen in our sample are representative of the range present at high redshift then extrapolations of total infrared luminosities and star formation rates from the observed 24um flux will be uncertain at the factor-of-five level (total range). The corresponding uncertainties using the redshifted 8.0um flux (e.g. observed 24um flux for a z=2 source) are factors of 10-20. Considerable caution should be used when interpreting such extrapolated infrared luminosities.Comment: 32 pages including 16 figures; accepted for publication in the Astrophysical Journa

Glycomics Analysis of Mammalian Heparan Sulfates Modified by the Human Extracellular Sulfatase HSulf2

The Sulfs are a family of endosulfatases that selectively modify the 6O-sulfation state of cell-surface heparan sulfate (HS) molecules. Sulfs serve as modulators of cell-signaling events because the changes they induce alter the cell surface co-receptor functions of HS chains. A variety of studies have been aimed at understanding how Sulfs modify HS structure, and many of these studies utilize Sulf knockout cell lines as the source for the HS used in the experiments. However, genetic manipulation of Sulfs has been shown to alter the expression levels of HS biosynthetic enzymes, and in these cases an assessment of the fine structural changes induced solely by Sulf enzymatic activity is not possible. Therefore, the present work aims to extend the understanding of substrate specificities of HSulf2 using in vitro experiments to compare HSulf2 activities on HS from different organ tissues.To further the understanding of Sulf enzymatic activity, we conducted in vitro experiments where a variety of mammalian HS substrates were modified by recombinant human Sulf2 (HSulf2). Subsequent to treatment with HSulf2, the HS samples were exhaustively depolymerized and analyzed using size-exclusion liquid chromatography-mass spectrometry (SEC-LC/MS). We found that HSulf2 activity was highly dependent on the structural features of the HS substrate. Additionally, we characterized, for the first time, the activity of HSulf2 on the non-reducing end (NRE) of HS chains. The results indicate that the action pattern of HSulf2 at the NRE is different compared to internally within the HS chain.The results of the present study indicate that the activity of Sulfs is dependent on the unique structural features of the HS populations that they edit. The activity of HSulf2 at HS NREs implicates the Sulfs as key regulators of this region of the chains, and concomitantly, the protein-binding events that occur there