Optimal Consensus set for nD Fixed Width Annulus Fitting

International audienceThis paper presents a method for fitting a nD fixed width spherical shell to a given set of nD points in an image in the presence of noise by maximizing the number of inliers, namely the consensus set. We present an algorithm, that provides the optimal solution(s) within a time complexity O(N n+1 log N) for dimension n, N being the number of points. Our algorithm guarantees optimal solution(s) and has lower complexity than previous known methods

From Ag₂Sb₂O₆ to Cd₂Sb₂O₇: Investigations on an anion-deficient to ideal pyrochlore solid solution

A complete solid solution between the anion-deficient pyrochlore Ag₂Sb₂O₆ and the ideal pyrochlore Cd₂Sb₂O₇ has been synthesized through the standard solid state ceramic method. Each composition has been characterized by various different techniques, including powder X-ray diffraction, optical spectroscopy, electron paramagnetic resonance and ¹²¹Sb Mössbauer spectroscopy. Computational methods based on density functional theory complement this investigation. Photocatalytic activity has been studied, and transport properties have been measured on pellets densified by spark plasma sintering. The analysis of the data collected from these various techniques enables a comprehensive characterization of the complete solid solution and revealed an anomalous behavior in the Cd-rich end of the solid solution, which has been proposed to arise from a possible radical O⁻ species in small concentrations.Keywords: Cd₂Sb₂O₇, Thermogravimetric analysis, Ag₂Sb₂O₆, ¹²¹Sb Mössbauer spectroscopy, Optical properties, Pyrochlor

Fam65b is a new transcriptional target of FOXO1 that regulates RhoA signaling for T lymphocyte migration

Forkhead box Os (FOXOs) transcription factors favor both T cell quiescence and trafficking through their control of the expression of genes involved in cell cycle progression, adhesion and homing. Here, we report that the product of the fam65b gene is a new transcriptional target of FOXO1 that regulates RhoA activity. We show that Fam65b binds the small GTPase RhoA via a non canonical domain and represses its activity by decreasing its GTP loading. As a consequence, Fam65b negatively regulates chemokine-induced responses such as adhesion, morphological polarisation and migration. Therefore, these results show the existence of a new functional link between FOXO1 and RhoA pathways, through which the FOXO1 target Fam65b tonically dampens chemokine-induced migration by repressing RhoA activity

Verticillium disease of Agaricus bisporus: Variations in host contribution to total fungal DNA in relation to symptom heterogeneity

cited By 11International audienceThe pathogenic fungus Verticillium fungicola, responsible for dry bubble disease of the common mushroom Agaricus bisporus, causes various symptoms on its host, bubbles (undifferentiated spherical masses), bent and/or split stipes (blowout) and spotty caps. Host DNA quantification by real-time PCR was used to observed relationships between the type of symptom and the relative amount of A. bisporus and V. fungicola in diseased mushrooms. Verticillium fungicola is involved in bubble formation but does not appear to regulate its growth. Quantifications in bubbles and stipe-bubbles (morphology between bubble and sporophore with stipe blowout) showed that the pathogen has no effect on the growth of undifferentiated host hyphae but prevents morphological differentiation if not initiated and stops it when initiated hyphae are affected. Mushrooms with stipe blowout exhibiting both mature and abortive lamellae reveal that V. fungicola has a restricted area of action in host tissues. Despite their visual aspect, healthy looking parts of mushrooms showing spots or stipe blowout were actually contaminated. Discolouration and symptom development are two distinct events. The colour of the tissues was correlated to the percentage of A. bisporus DNA, suggesting that discolouration is not an efficient defensive mechanism, and occurs at the time V. fungicola developed enough to induce tissues necrosis. © 2007 KNPV

Molecular and physiological diversity among Verticillium fungicola var. fungicola

cited By 11International audienceThe genetic and physiological variability of Verticillium fungicola var. aleophilum responsible for Agaricus bisporus dry bubble disease in North America is well documented but little is known about the var. fungicola affecting European crops. Variability was assessed within this variety and compared with that reported for the var. aleophilum. Eighteen isolates of V. fungicola var. fungicola and four var. aleophilum isolates were analysed for DNA polymorphism, mycelial growth, response to biochemicals produced by A. bisporus, fungicide resistance, and pathogenicity assessed by direct inoculation on sporophore or casing contamination. RAPD and AFLP markers delineated three French isolates from a homogeneous group containing the other var. fungicola isolates, but no correlation could be drawn between DNA polymorphism and the various traits studied. The var. fungicola isolates were more susceptible than the var. aleophilum isolates to the antibiosis effect of A. bisporus. Only mycelial growth rate at 23 °C could explain the variability in aggressiveness among the European isolates. The putative effect of the post-incubation temperature on contamination during mushroom cultivation was discussed. This work emphasized that, like the American var. aleophilum, the var. fungicola in Europe is genetically homogeneous, but physiological diversity exists, especially in France where it could be related to less standardized cultural practices. © 2006 The British Mycological Society

The medicinal Agaricus mushroom cultivated in Brazil: Biology, cultivation and non-medicinal valorisation

cited By 29International audienceSun mushroom is a cultivated mushroom extensively studied for its medicinal properties for several years and literature abounds on the topic. Besides, agronomical aspects were investigated in Brazil, the country the mushroom comes from, and some studies focus on the biology of the fungus. This review aimed to present an overview of the non-medicinal knowledge on the mushroom. Areas of commercial production and marketing trends are presented. Its specific fragrance, taste, nutritional value and potential use of extracts as food additives are compared to those of the most cultivated fungi and laboratory models. The interest of the mushroom for lignocellulosic enzyme production and source of biomolecules for the control of plant pathogens are shown. Investigation of genetic variability among cultivars is reported. Growing and storage of mycelium, as well as cultivation conditions (substrate and casing generally based on local products; indoor and outdoor cultivation; diseases and disorders) are described and compared to knowledge on Agaricus bisporus. © 2011 Springer-Verlag

Characterisation of two varieties of Verticillium fungicola and their interactions with Agaricus bisporus

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Expression of phenol oxidase and heat-shock genes during the development of Agaricus bisporus fruiting bodies, healthy and infected by Lecanicillium fungicola

cited By 17International audienceThe fungal pathogen Lecanicillium fungicola (formerly Verticillium fungicola) is responsible for severe losses worldwide in the mushroom (Agaricus bisporus) industry. Infected crops are characterised by masses of undifferentiated tissue (bubbles) growing in place of sporophores. The expression of three laccase genes (lcc1, lcc2 and lcc3), two tyrosinase genes (AbPPO1 and AbPPO2) and the hspA gene encoding a heat-shock protein known to be potentially associated with host-pathogen interaction was investigated in mycelial aggregates and during the development of healthy sporophores and bubbles of a susceptible cultivar. The lcc3, AbPPO2 and hspA genes were each expressed at different levels at the different stages of sporophore morphogenesis, whilst they showed a stable expression throughout bubble development. The transcript levels were similar in bubbles and at the first developmental stage of healthy fruiting bodies, both showing no tissue differentiation. These observations suggest that lcc3, AbPPO2 and hspA are associated with A. bisporus morphogenesis. Comparing the expression of the hspA gene in three susceptible and three tolerant strains showed that the latter displayed a higher level of transcript in the primordium, which is the stage receptive to the pathogen. The six strains exhibited a comparable expression in the vegetative mycelium, non-receptive to L. fungicola. © 2009 Springer-Verlag