Comets

Vacuum ultraviolet observations from sounding rockets and satellite observatories of the gaseous comae of several comets are reviewed. The earliest of these led to discovery of the hydrogen envelope extending for millions of km from the nucleus. Subsequent observations of H I Lyman alpha, the OH (0,0 band and the oxygen resonance triplet provided strong evidence for the water-ice model of the cometary nucleus. Several species were discovered in the coma including C, C(+), CO, S, and CS. High resolution spectroscopy and the spatial variation of the observed emissions provide means to elucidate the production and excitation mechanisms of these species. The similarity of the spectra of the half dozen comets observed to date argues for a common, homogeneous composition (with the exception of dust and CO) of the cometary ice and a minimal effect on the neutral species due to molecular collisions in the inner coma

Spectroscopic signatures related to a sunquake

© 2015. The American Astronomical Society. All rights reserved.. The presence of flare-related acoustic emission (sunquakes (SQs)) in some flares, and only in specific locations within the flaring environment, represents a severe challenge to our current understanding of flare energy transport processes. In an attempt to contribute to understanding the origins of SQs we present a comparison of new spectral observations from Hinode's EUV imaging Spectrometer (EIS) and the Interface Region Imaging Spectrograph (IRIS) of the chromosphere, transition region, and corona above an SQ, and compare them to the spectra observed in a part of the flaring region with no acoustic signature. Evidence for the SQ is determined using both time-distance and acoustic holography methods, and we find that unlike many previous SQ detections, the signal is rather dispersed, but that the time-distance and 6 and 7 mHz sources converge at the same spatial location. We also see some evidence for different evolution at different frequencies, with an earlier peak at 7 mHz than at 6 mHz. Using EIS and IRIS spectroscopic measurements we find that in this location, at the time of the 7 mHz peak the spectral emission is significantly more intense, shows larger velocity shifts and substantially broader profiles than in the location with no SQ, and there is a good correlation between blueshifted, hot coronal, hard X-ray (HXR), and redshifted chromospheric emission, consistent with the idea of a strong downward motion driven by rapid heating by nonthermal electrons and the formation of chromospheric shocks. Exploiting the diagnostic potential of the Mg ii triplet lines, we also find evidence for a single large temperature increase deep in the atmosphere, which is consistent with this scenario. The time of the 6 mHz and time-distance peak signal coincides with a secondary peak in the energy release process, but in this case we find no evidence of HXR emission in the quake location, instead finding very broad spectral lines, strongly shifted to the red, indicating the possible presence of a significant flux of downward propagating Alfvén waves

The Xp10 bacteriophage protein P7 inhibits transcription by the major and major variant forms of the host RNA polymerase via a common mechanism

The σ factor is a functionally obligatory subunit of the bacterial transcription machinery, the RNA polymerase. Bacteriophage-encoded small proteins that either modulate or inhibit the bacterial RNAP to allow the temporal regulation of bacteriophage gene expression often target the activity of the major bacterial σ factor, σ70. Previously, we showed that during Xanthomonas oryzae phage Xp10 infection, the phage protein P7 inhibits the host RNAP by preventing the productive engagement with the promoter and simultaneously displaces the σ70 factor from the RNAP. In this study, we demonstrate that P7 also inhibits the productive engagement of the bacterial RNAP containing the major variant bacterial σ factor, σ54, with its cognate promoter. The results suggest for the first time that the major variant form of the host RNAP can also be targeted by bacteriophage-encoded transcription regulatory proteins. Since the major and major variant σ factor interacting surfaces in the RNAP substantially overlap, but different regions of σ70 and σ54 are used for binding to the RNAP, our results further underscore the importance of the σ–RNAP interface in bacterial RNAP function and regulation and potentially for intervention by antibacterials

Dusty plasma cavities: probe-induced and natural

A comprehensive exploration of regional dust evacuation in complex plasma crystals is presented. Voids created in 3D crystals on the International Space Station have provided a rich foundation for experiments, but cavities in dust crystals formed in ground-based experiments have not received as much attention. Inside a modified GEC RF cell, a powered vertical probe was used to clear the central area of a dust crystal, producing a cavity with high cylindrical symmetry. Cavities generated by three mechanisms are examined. First, repulsion of micrometer-sized particles by a negatively charged probe is investigated. A model of this effect developed for a DC plasma is modified and applied to explain new experimental data in RF plasma. Second, the formation of natural cavities is surveyed; a radial ion drag proposed to occur due to a curved sheath is considered in conjunction with thermophoresis and a flattened confinement potential above the center of the electrode. Finally, cavity formation unexpectedly occurs upon increasing the probe potential above the plasma floating potential. The cavities produced by these methods appear similar, but each are shown to be facilitated by fundamentally different processes.Comment: 10 pages, 12 figure

Formation of Cosmic Dust Bunnies

Planetary formation is an efficient process now thought to take place on a relatively short astronomical time scale. Recent observations have shown that the dust surrounding a protostar emits more efficiently at longer wavelengths as the protoplanetary disk evolves, suggesting that the dust particles are coagulating into fluffy aggregates, "much as dust bunnies form under a bed." One poorly understood problem in this coagulation process is the manner in which micron-sized, charged grains form the fractal aggregate structures now thought to be the precursors of protoplanetary disk evolution. This study examines the characteristics of such fractal aggregates formed by the collision of spherical monomers and aggregates where the charge is distributed over the aggregate structure. The aggregates are free to rotate due to collisions and dipole-dipole electrostatic interactions. Comparisons are made for different precursor size distributions and like-charged, oppositelycharged, and neutral grains

The 2013 February 17 sunquake in the context of the active region's magnetic field configuration

© 2017. The American Astronomical Society. All rights reserved. Sunquakes are created by the hydrodynamic response of the lower atmosphere to a sudden deposition of energy and momentum. In this study, we investigate a sunquake that occurred in NOAA active region 11675 on 2013 February 17. Observations of the corona, chromosphere, and photosphere are brought together for the first time with a nonlinear force-free model of the active region's magnetic field in order to probe the magnetic environment in which the sunquake was initiated. We find that the sunquake was associated with the destabilization of a flux rope and an associated M-class GOES flare. Active region 11675 was in its emergence phase at the time of the sunquake and photospheric motions caused by the emergence heavily modified the flux rope and its associated quasi-separatrix layers, eventually triggering the flux rope's instability. The flux rope was surrounded by an extended envelope of field lines rooted in a small area at the approximate position of the sunquake. We argue that the configuration of the envelope, by interacting with the expanding flux rope, created a “magnetic lens” that may have focussed energy on one particular location of the photosphere, creating the necessary conditions for the initiation of the sunquake

Generating social network data using partially described networks: an example informing avian influenza control in the British poultry industry

<p>Background: Targeted sampling can capture the characteristics of more vulnerable sectors of a population, but may bias the picture of population level disease risk. When sampling network data, an incomplete description of the population may arise leading to biased estimates of between-host connectivity. Avian influenza (AI) control planning in Great Britain (GB) provides one example where network data for the poultry industry (the Poultry Network Database or PND), targeted large premises and is consequently demographically biased. Exposing the effect of such biases on the geographical distribution of network properties could help target future poultry network data collection exercises. These data will be important for informing the control of potential future disease outbreaks.</p> <p>Results: The PND was used to compute between-farm association frequencies, assuming that farms sharing the same slaughterhouse or catching company, or through integration, are potentially epidemiologically linked. The fitted statistical models were extrapolated to the Great Britain Poultry Register (GBPR); this dataset is more representative of the poultry industry but lacks network information. This comparison showed how systematic biases in the demographic characterisation of a network, resulting from targeted sampling procedures, can bias the derived picture of between-host connectivity within the network.</p> <p>Conclusions: With particular reference to the predictive modeling of AI in GB, we find significantly different connectivity patterns across GB when network estimates incorporate the more demographically representative information provided by the GBPR; this has not been accounted for by previous epidemiological analyses. We recommend ranking geographical regions, based on relative confidence in extrapolated estimates, for prioritising further data collection. Evaluating whether and how the between-farm association frequencies impact on the risk of between-farm transmission will be the focus of future work.</p&gt