Enhancing methods for under-canopy unmanned aircraft system based photogrammetry in complex forests for tree diameter measurement

The application of Unmanned Aircraft Systems (UAS) beneath the forest canopy provides a potentially valuable alternative to ground-based measurement techniques in areas of dense canopy cover and undergrowth. This research presents results from a study of a consumer-grade UAS flown under the forest canopy in challenging forest and terrain conditions. This UAS was deployed to assess under-canopy UAS photogrammetry as an alternative to field measurements for obtaining stem diameters as well as ultra-high-resolution (~400,000 points/m2) 3D models of forest study sites. There were 378 tape-based diameter measurements collected from 99 stems in a native, unmanaged eucalyptus pulchella forest with mixed understory conditions and steep terrain. These measurements were used as a baseline to evaluate the accuracy of diameter measurements from under-canopy UAS-based photogrammetric point clouds. The diameter measurement accuracy was evaluated without the influence of a digital terrain model using an innovative tape-based method. A practical and detailed methodology is presented for the creation of these point clouds. Lastly, a metric called the Circumferential Completeness Index (CCI) was defined to address the absence of a clearly defined measure of point coverage when measuring stem diameters from forest point clouds. The measurement of the mean CCI is suggested for use in future studies to enable a consistent comparison of the coverage of forest point clouds using different sensors, point densities, trajectories, and methodologies. It was found that root-mean-squared-errors of diameter measurements were 0.011 m in Site 1 and 0.021 m in the more challenging Site 2. The point clouds in this study had a mean validated CCI of 0.78 for Site 1 and 0.7 for Site 2, with a mean unvalidated CCI of 0.86 for Site 1 and 0.89 for Site 2. The results in this study demonstrate that under-canopy UAS photogrammetry shows promise in becoming a practical alternative to traditional field measurements, however, these results are currently reliant upon the operator’s knowledge of photogrammetry and his/her ability to fly manually in object-rich environments. Future work should pursue solutions to autonomous operation, more complete point clouds, and a method for providing scale to point clouds when global navigation satellite systems are unavailable

Design and testing of a novel unoccupied aircraft system for the collection of forest canopy samples

Unoccupied Aircraft Systems (UAS) are beginning to replace conventional forest plot mensuration through their use as low-cost and powerful remote sensing tools for monitoring growth, estimating biomass, evaluating carbon stocks and detecting weeds; however, physical samples remain mostly collected through time-consuming, expensive and potentially dangerous conventional techniques. Such conventional techniques include the use of arborists to climb the trees to retrieve samples, shooting branches with firearms from the ground, canopy cranes or the use of pole-mounted saws to access lower branches. UAS hold much potential to improve the safety, efficiency, and reduce the cost of acquiring canopy samples. In this work, we describe and demonstrate four iterations of 3D printed canopy sampling UAS. This work includes detailed explanations of designs and how each iteration informed the design decisions in the subsequent iteration. The fourth iteration of the aircraft was tested for the collection of 30 canopy samples from three tree species: eucalyptus pulchella, eucalyptus globulus and acacia dealbata trees. The collection times ranged from 1 min and 23 s, up to 3 min and 41 s for more distant and challenging to capture samples. A vision for the next iteration of this design is also provided. Future work may explore the integration of advanced remote sensing techniques with UAS-based canopy sampling to progress towards a fully-automated and holistic forest information capture system

TLS2trees: A scalable tree segmentation pipeline for TLS data

1. Above-ground biomass (AGB) is an important metric used to quantify the mass of carbon stored in terrestrial ecosystems. For forests, this is routinely estimated at the plot scale (typically 1 ha) using inventory measurements and allometry. In recent years, terrestrial laser scanning (TLS) has appeared as a disruptive technology that can generate a more accurate assessment of tree and plot scale AGB; however, operationalising TLS methods has had to overcome a number of challenges. One such challenge is the segmentation of individual trees from plot level point clouds that are required to estimate woody volume, this is often done manually (e.g. with interactive point cloud editing software) and can be very time consuming. 2. Here we present TLS2trees, an automated processing pipeline and set of Python command line tools that aims to redress this processing bottleneck. TLS2treesconsists of existing and new methods and is specifically designed to be horizontally scalable. The processing pipeline is demonstrated on 7.5 ha of TLS data cap�tured across 10 plots of seven forest types; from open savanna to dense tropical rainforest. 3. A total of 10,557 trees are segmented with TLS2trees: these are compared to 1281 manually segmented trees. Results indicate that TLS2trees performs well, particularly for larger trees (i.e. the cohort of largest trees that comprise 50% of total plot volume), where plot-wise tree volume bias is ±0.4 m3 and %RMSE is 60%. Segmentation performance decreases for smaller trees, for example where DBH ≤10 cm; a number of reasons are suggested including performance of se�mantic segmentation step. 4. The volume and scale of TLS data captured in forest plots is increasing. It is sug�gested that to fully utilise this data for activities such as monitoring, reporting and verification or as reference data for satellite missions an automated processing pipeline, such as TLS2trees, is required. To facilitate improvements to TLS2trees, as well as modification for other laser scanning modes (e.g. mobile and UAV laser scanning), TLS2trees is a free and open-source software

Sensor agnostic semantic segmentation of structurally diverse and complex forest point clouds using deep learning

Forest inventories play an important role in enabling informed decisions to be made for the management and conservation of forest resources; however, the process of collecting inventory information is laborious. Despite advancements in mapping technologies allowing forests to be digitized in finer granularity than ever before, it is still common for forest measurements to be collected using simple tools such as calipers, measuring tapes, and hypsometers. Dense understory vegetation and complex forest structures can present substantial challenges to point cloud processing tools, often leading to erroneous measurements, and making them of less utility in complex forests. To address this challenge, this research demonstrates an effective deep learning approach for semantically segmenting high-resolution forest point clouds from multiple different sensing systems in diverse forest conditions. Seven diverse point cloud datasets were manually segmented to train and evaluate this model, resulting in per-class segmentation accuracies of Terrain: 95.92%, Vegetation: 96.02%, Coarse Woody Debris: 54.98%, and Stem: 96.09%. By exploiting the segmented point cloud, we also present a method of extracting a Digital Terrain Model (DTM) from such segmented point clouds. This approach was applied to a set of six point clouds that were made publicly available as part of a benchmarking study to evaluate the DTM performance. The mean DTM error was 0.04 m relative to the reference with 99.9% completeness. These approaches serve as useful steps toward a fully automated and reliable measurement extraction tool, agnostic to the sensing technology used or the complexity of the forest, provided that the point cloud has sufficient coverage and accuracy. Ongoing work will see these models incorporated into a fully automated forest measurement tool for the extraction of structural metrics for applications in forestry, conservation, and research