15 research outputs found
Broad-Acting Therapeutic Effects of miR-29b-Chitosan on Hypertension and Diabetic Complications
MicroRNA miR-29 promotes endothelial function in human arterioles in part by targeting LYPLA1 and increasing nitric oxide production. In addition, miR-29 is a master inhibitor of extracellular matrix gene expression, which may attenuate fibrosis but could also weaken tissue structure. The goal of this study was to test whether miR-29 could be developed as an effective, broad-acting, and safe therapeutic. Substantial accumulation of miR-29b and effective knockdown of Lypla1 in several mouse tissues were achieved using a chitosan-packaged, chemically modified miR-29b mimic (miR-29b-CH-NP) injected systemically at 200 ÎŒg/kg body weight. miR-29b-CH-NP, injected once every 3 days, significantly attenuated angiotensin II-induced hypertension. In db/db mice, miR-29b-CH-NP treatment for 12 weeks decreased cardiac and renal fibrosis and urinary albuminuria. In uninephrectomized db/db mice, miR-29b-CH-NP treatment for 20 weeks significantly improved myocardial performance index and attenuated proteinuria. miR-29b-CH-NP did not worsen abdominal aortic aneurysm in ApoE knockout mice treated with angiotensin II. miR-29b-CH-NP caused aortic root fibrotic cap thinning in ApoE knockout mice fed a high-cholesterol and high-fat diet but did not worsen the necrotic zone or mortality. In conclusion, systemic delivery of low-dose miR-29b-CH-NP is an effective therapeutic for several forms of cardiovascular and renal disease in mice
Two novel loci, COBL and SLC10A2, for Alzheimer's disease in African Americans
INTRODUCTION:
African Americans' (AAs) late-onset Alzheimer's disease (LOAD) genetic risk profile is incompletely understood. Including clinical covariates in genetic analyses using informed conditioning might improve study power.
METHODS:
We conducted a genome-wide association study (GWAS) in AAs employing informed conditioning in 1825 LOAD cases and 3784 cognitively normal controls. We derived a posterior liability conditioned on age, sex, diabetes status, current smoking status, educational attainment, and affection status, with parameters informed by external prevalence information. We assessed association between the posterior liability and a genome-wide set of single-nucleotide polymorphisms (SNPs), controlling for APOE and ABCA7, identified previously in a LOAD GWAS of AAs.
RESULTS:
Two SNPs at novel loci, rs112404845 (P = 3.8 Ă 10-8), upstream of COBL, and rs16961023 (P = 4.6 Ă 10-8), downstream of SLC10A2, obtained genome-wide significant evidence of association with the posterior liability.
DISCUSSION:
An informed conditioning approach can detect LOAD genetic associations in AAs not identified by traditional GWAS
System-wide transcriptome damage and tissue identity loss in COVID-19 patients
The molecular mechanisms underlying the clinical manifestations of coronavirus disease 2019 (COVID-19), and what distinguishes them from common seasonal influenza virus and other lung injury states such as acute respiratory distress syndrome, remain poorly understood. To address these challenges, we combine transcriptional profiling of 646 clinical nasopharyngeal swabs and 39 patient autopsy tissues to define body-wide transcriptome changes in response to COVID-19. We then match these data with spatial protein and expression profiling across 357 tissue sections from 16 representative patient lung samples and identify tissue-compartment-specific damage wrought by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection, evident as a function of varying viral loads during the clinical course of infection and tissue-type-specific expression states. Overall, our findings reveal a systemic disruption of canonical cellular and transcriptional pathways across all tissues, which can inform subsequent studies to combat the mortality of COVID-19 and to better understand the molecular dynamics of lethal SARS-CoV-2 and other respiratory infections., ⹠Across all organs, fibroblast, and immune cell populations increase in COVID-19 patients ⹠Organ-specific cell types and functional markers are lost in all COVID-19 tissue types ⹠Lung compartment identity loss correlates with SARS-CoV-2 viral loads ⹠COVID-19 uniquely disrupts co-occurrence cell type clusters (different from IAV/ARDS) , Park et al. report system-wide transcriptome damage and tissue identity loss wrought by SARS-CoV-2, influenza, and bacterial infection across multiple organs (heart, liver, lung, kidney, and lymph nodes) and provide a spatiotemporal landscape of COVID-19 in the lung
Biosynthesis of bacteriochlorophylls in purple bacteria
The purple bacteria make bacteriochlorophylls for the photosynthetic mode of growth. These pigments are made from the simple precursors glycine and succinyl CoA and the initial steps in the pathway of bacteriochlorophyll biosynthesis are shared with the vitamin B12 and heme biosynthetic pathways. This chapter concentrates on the biochemical properties of the enzymes involved in each step of the pathway and the discovery and assignment of the genes encoding these enzymes. The characterization of purple bacterial enzymes involved in these steps has been crucial in understanding similar enzymes from other sources. The characterization of the early steps in the pathway within purple bacteria, such as ÎŽ-aminolevulinate synthase, contributed significantly to the understanding of the mammalian enzymes in the 1950s and 1960s. More recently the study of the purple bacterial enzymes toward the end of the pathway has been instrumental in identifying and characterizing the orthologous enzymes from cyanobacteria and plants. In this review we present the details of the properties of these enzymes from the purple bacteria, such as purification methods and kinetic analyses from the early literature, through to more recent studies using recombinant purple bacterial enzymes.23 page(s
Transcriptomic analysis identifies novel candidates in cardiorenal pathology mediated by chronic peritoneal dialysis
Abstract Peritoneal dialysis (PD) is associated with increased cardiovascular (CV) risk. Studies of PD-related CV pathology in animal models are lacking despite the clinical importance. Here we introduce the phenotypic evaluation of a rat model of cardiorenal syndrome in response to chronic PD, complemented by a rich transcriptomic dataset detailing chronic PD-induced changes in left ventricle (LV) and kidney tissues. This study aims to determine how PD alters CV parameters and risk factors while identifying pathways for potential therapeutic targets. Sprague Dawley rats underwent Sham or 5/6 nephrectomy (5/6Nx) at 10Â weeks of age. Six weeks later an abdominal dialysis catheter was placed in all rats before random assignment to Control or PD (3 daily 1-h exchanges) groups for 8Â days. Renal and LV pathology and transcriptomic analysis was performed. The PD regimen reduced circulating levels of BUN in 5/6Nx, indicating dialysis efficacy. PD did not alter blood pressure or cardiovascular function in Sham or 5/6Nx rats, though it attenuated cardiac hypertrophy. Importantly PD increased serum triglycerides in 5/6Nx rats. Furthermore, transcriptomic analysis revealed that PD induced numerous changed transcripts involved with inflammatory pathways, including neutrophil activation and atherosclerosis signaling. We have adapted a uremic rat model of chronic PD. Chronic PD induced transcriptomic changes related to inflammatory signaling that occur independent of 5/6Nx and augmented circulating triglycerides and predicted atherosclerosis signaling in 5/6Nx LV tissues. The changes are indicative of increased CV risk due to PD and highlight several pathways for potential therapeutic targets
Strategic Distribution of Protective Proteins within Bran Layers of Wheat Protects the Nutrient-Rich Endosperm1[C][W][OA]
Bran from bread wheat (Triticum aestivum âBabblerâ) grain is composed of many outer layers of dead maternal tissues that overlie living aleurone cells. The dead cell layers function as a barrier resistant to degradation, whereas the aleurone layer is involved in mobilizing organic substrates in the endosperm during germination. We microdissected three defined bran fractions, outer layers (epidermis and hypodermis), intermediate fraction (cross cells, tube cells, testa, and nucellar tissue), and inner layer (aleurone cells), and used proteomics to identify their individual protein complements. All proteins of the outer layers were enzymes, whose function is to provide direct protection against pathogens or improve tissue strength. The more complex proteome of the intermediate layers suggests a greater diversity of function, including the inhibition of enzymes secreted by pathogens. The inner layer contains proteins involved in metabolism, as would be expected from live aleurone cells, but this layer also includes defense enzymes and inhibitors as well as 7S globulin (specific to this layer). Using immunofluorescence microscopy, oxalate oxidase was localized predominantly to the outer layers, xylanase inhibitor protein I to the xylan-rich nucellar layer of the intermediate fraction and pathogenesis-related protein 4 mainly to the aleurone. Activities of the water-extractable enzymes oxalate oxidase, peroxidase, and polyphenol oxidase were highest in the outer layers, whereas chitinase activity was found only in assays of whole grains. We conclude that the differential protein complements of each bran layer in wheat provide distinct lines of defense in protecting the embryo and nutrient-rich endosperm
miRâ29 contributes to normal endothelial function and can restore it in cardiometabolic disorders
Abstract We investigated the role of microRNAs (miRNA) in endothelial dysfunction in the setting of cardiometabolic disorders represented by type 2 diabetes mellitus (T2DM). miRâ29 was dysregulated in resistance arterioles obtained by biopsy in T2DM patients. Intraluminal delivery of miRâ29aâ3p or miRâ29bâ3p mimics restored normal endotheliumâdependent vasodilation (EDVD) in T2DM arterioles that otherwise exhibited impaired EDVD. Intraluminal delivery of antiâmiRâ29bâ3p in arterioles from nonâDM human subjects or rats or targeted mutation of Mir29bâ1/a gene in rats led to impaired EDVD and exacerbation of hypertension in the rats. miRâ29bâ3p mimic increased, while antiâmiRâ29bâ3p or Mir29bâ1/a gene mutation decreased, nitric oxide levels in arterioles. The mutation of Mir29bâ1/a gene led to preferential differential expression of genes related to nitric oxide including Lypla1. Lypla1 was a direct target of miRâ29 and could abrogate the effect of miRâ29 in promoting nitric oxide production. Treatment with Lypla1 siRNA improved EDVD in arterioles obtained from T2DM patients or Mir29bâ1/a mutant rats or treated with antiâmiRâ29bâ3p. These findings indicate miRâ29 is required for normal endothelial function in humans and animal models and has therapeutic potential for cardiometabolic disorders
Acclimation to a HighâSalt Diet Is Sex Dependent
Background Premenopausal women are less likely to develop hypertension and saltârelated complications than are men, yet the impact of sex on mechanisms regulating Na+ homeostasis during dietary salt challenges is poorly defined. Here, we determined whether female rats have a more efficient capacity to acclimate to increased dietary salt intake challenge. Methods and Results Ageâmatched male and female Sprague Dawley rats maintained on a normalâsalt (NS) diet (0.49% NaCl) were challenged with a 5âday highâsalt diet (4.0% NaCl). We assessed serum, urinary, skin, and muscle electrolytes; total body water; and kidney Na+ transporters during the NS and highâsalt diet phases. During the 5âday highâsalt challenge, natriuresis increased more rapidly in females, whereas serum Na+ and body water concentration increased only in males. To determine if females are primed to handle changes in dietary salt, we asked the question whether the renal endothelinâ1 natriuretic system is more active in female rats, compared with males. During the NS diet, female rats had a higher urinary endothelinâ1 excretion rate than males. Moreover, Ingenuity Pathway Analysis of RNA sequencing data identified the enrichment of endothelin signaling pathway transcripts in the inner medulla of kidneys from NSâfed female rats compared with male counterparts. Notably, in human subjects who consumed an Na+âcontrolled diet (3314â3668Â mg/day) for 3Â days, women had a higher urinary endothelinâ1 excretion rate than men, consistent with our findings in NSâfed rats. Conclusions These results suggest that female sex confers a greater ability to maintain Na+ homeostasis during acclimation to dietary Na+ challenges and indicate that the intrarenal endothelinâ1 natriuretic pathway is enhanced in women