Virtual Human Generative Model: Masked Modeling Approach for Learning Human Characteristics

Identifying the relationship between healthcare attributes, lifestyles, and personality is vital for understanding and improving physical and mental conditions. Machine learning approaches are promising for modeling their relationships and offering actionable suggestions. In this paper, we propose Virtual Human Generative Model (VHGM), a machine learning model for estimating attributes about healthcare, lifestyles, and personalities. VHGM is a deep generative model trained with masked modeling to learn the joint distribution of attributes conditioned on known ones. Using heterogeneous tabular datasets, VHGM learns more than 1,800 attributes efficiently. We numerically evaluate the performance of VHGM and its training techniques. As a proof-of-concept of VHGM, we present several applications demonstrating user scenarios, such as virtual measurements of healthcare attributes and hypothesis verifications of lifestyles.Comment: 14 pages, 4 figure

Three-pulse multiplex coherent anti-Stokes/Stokes Raman scatterin

International audienceWe have developed a three-pulse non-degenerate multiplex coherent Raman microspectroscopic system using a white-light laser source. The fundamental output (1064 nm) of a Nd:YAG laser is used for the pump radiation with the white-light laser output (1100-1700 nm) for the Stokes radiation to achieve broadband multiplex excitations of vibrational coherences. The second harmonic (532 nm) of the same Nd:YAG laser is used for the probe radiation. Thanks to the large wavelength difference between the pump and probe radiations, coherent anti-Stokes Raman scattering (CARS) and coherent Stokes Raman scattering (CSRS) can be detected simultaneously. Simultaneous detection of CARS and CSRS enables us to obtain information on the electronic resonance effect that affects differently the CARS and CSRS signals. Simultaneous analysis of the CARS and CSRS signals provides us the imaginary part of v(3) without introducing any arbitrary parameter in the maximum entropy method (MEM)

Surfactant uptake dynamics in mammalian cells elucidated with quantitative coherent anti-stokes Raman scattering microspectroscopy.

The mechanism of surfactant-induced cell lysis has been studied with quantitative coherent anti-Stokes Raman scattering (CARS) microspectroscopy. The dynamics of surfactant molecules as well as intracellular biomolecules in living Chinese Hamster Lung (CHL) cells has been examined for a low surfactant concentration (0.01 w%). By using an isotope labeled surfactant having CD bonds, surfactant uptake dynamics in living cells has been traced in detail. The simultaneous CARS imaging of the cell itself and the internalized surfactant has shown that the surfactant molecules is first accumulated inside a CHL cell followed by a sudden leak of cytosolic components such as proteins to the outside of the cell. This finding indicates that surfactant uptake occurs prior to the cell lysis, contrary to what has been believed: surface adsorption of surfactant molecules has been thought to occur first with subsequent disruption of cell membranes. Quantitative CARS microspectroscopy enables us to determine the molecular concentration of the surfactant molecules accumulated in a cell. We have also investigated the effect of a drug, nocodazole, on the surfactant uptake dynamics. As a result of the inhibition of tubulin polymerization by nocodazole, the surfactant uptake rate is significantly lowered. This fact suggests that intracellular membrane trafficking contributes to the surfactant uptake mechanism

Surfactant Uptake Dynamics in Mammalian Cells Elucidated with Quantitative Coherent Anti-Stokes Raman Scattering Microspectroscopy

International audienceThe mechanism of surfactant-induced cell lysis has been studied with quantitative coherent anti-Stokes Raman scattering (CARS) microspectroscopy. The dynamics of surfactant molecules as well as intracellular biomolecules in living Chinese Hamster Lung (CHL) cells has been examined for a low surfactant concentration (0.01 w%). By using an isotope labeled surfactant having CD bonds, surfactant uptake dynamics in living cells has been traced in detail. The simultaneous CARS imaging of the cell itself and the internalized surfactant has shown that the surfactant molecules is first accumulated inside a CHL cell followed by a sudden leak of cytosolic components such as proteins to the outside of the cell. This finding indicates that surfactant uptake occurs prior to the cell lysis, contrary to what has been believed: surface adsorption of surfactant molecules has been thought to occur first with subsequent disruption of cell membranes. Quantitative CARS microspectroscopy enables us to determine the molecular concentration of the surfactant molecules accumulated in a cell. We have also investigated the effect of a drug, nocodazole, on the surfactant uptake dynamics. As a result of the inhibition of tubulin polymerization by nocodazole, the surfactant uptake rate is significantly lowered. This fact suggests that intracellular membrane trafficking contributes to the surfactant uptake mechanism

Protein Secondary Structure Imaging with Ultrabroadband Multiplex Coherent Anti-Stokes Raman Scattering (CARS) Microspectroscopy

ISSN 1520-6106International audienceProtein secondary structures in human hair have been studied with ultrabroadband multiplex coherent anti-Stokes Raman scattering (CARS) microspectroscopy. The CARS peak-shift mapping method has been developed and applied to hair samples with and without treatments by chemical reduction and mechanical extension. It clearly visualizes the treatment induced changes in protein secondary structures and their spatial distributions. Using the new imaging technique, we found a multilayered structure in the human hair cortex

The concentration dependence of d₂₅-SDS cell lysis efficiency; ++ corresponds to clear cell lysis, +: moderate cell lysis, −: remaining stable.

<p>The concentration dependence of d₂₅-SDS cell lysis efficiency; ++ corresponds to clear cell lysis, +: moderate cell lysis, −: remaining stable.</p

Im[χ⁽³⁾] spectra and images from a CHL cell.

<p>Im[χ⁽³⁾] spectra from the two points of the CHL cell. <b>A</b> and <b>B</b> are obtained from the points indicated as × and + in <b>C</b>, respectively. The inset of each spectrum is the expanded spectrum in the fingerprint region. The exposure time is 50 msec. Im[χ⁽³⁾] images at 2930 cm⁻¹ (<b>C</b>), 2850 cm⁻¹ (<b>D</b>), 2655 cm⁻¹ (<b>E</b>), 2446 cm⁻¹ (<b>F</b>) and 1003 cm⁻¹ (<b>G</b>), respectively. The scale bar in the image is 10 µm. The image consists of 91×81 pixels and the exposure time for each pixel is 50 msec. Each image is normalized at the intensity maximal of each band.</p

Accumulation of SDS in a CHL cell and subsequent cellular death.

<p><b>A</b>. Time-resolved Im[χ⁽³⁾] spectra obtained with the summation over all the spectra in the cell shown in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0093401#pone-0093401-g003" target="_blank">Fig. 3</a>. Time-profiles of band amplitudes at 2100 cm⁻¹ (<b>B</b>), 2930 cm⁻¹ (<b>C</b>), 2850 cm⁻¹ (<b>D</b>), 1655 cm⁻¹ (<b>E</b>), 1446 cm⁻¹ (<b>F</b>) and 1003 cm⁻¹ (<b>G</b>).</p

Time-resolved Im[χ⁽³⁾] images of the CHL cell with the surfactant.

<p>The scale bar in the image is 10 µm. The image consists of 71×51 pixels and the exposure time for each pixel is 50 msec. Each row of the CARS images is measured every 3.5 min. Each column is normalized at the intensity maximal of each band.</p

Nocodazole lowers the surfactant uptake rate of a CHL cell.

<p><b>A</b>. Time-resolved Im[χ⁽³⁾] spectra obtained with the summation over all the spectra in the cell shown in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0093401#pone-0093401-g005" target="_blank">Fig. 5</a>. <b>B</b>. Time-profiles of band amplitudes at 2100 cm⁻¹ (circle, left axis) and 1003 cm⁻¹ (cross, right axis).</p