Palynostratigraphy and palaeoenvironments of the Rævekløft, Gule Horn and Ostreaelv Formations (Lower–Middle Jurassic), Neill Klinter Group, Jameson Land, East Greenland

The Neill Klinter Group of Jameson Land, East Greenland contains rich and diverse palynomorph assemblages. Spores, pollen and freshwater algae dominate most of the samples, but dinoflagellate cysts and acritarchs also form important components. The ages suggested by the palynomorphs from the Rævekløft, Gule Horn and Ostreaelv Formations span the period from the Early Pliensbachian to the early Aalenian. The number of palynomorphs identified totals 136, including 83 miospore and 53 microplankton species; they are grouped into seven palynological assemblage zones. In general, there is good agreement between the palynological and sedimentological data, and the palynological data has refined the understanding of the depositional palaeoenvironments of the Neill Klinter Group. In some cases, the boundaries of the palynological assemblage zones are congruent with major sequence stratigraphic surfaces and the palynological data thus support the sequence stratigraphic interpretation. In other cases, however, regional correlation indicates that the zone boundaries cross important sequence stratigraphic surfaces, such as sequence boundaries; such behaviour is thought to reflect the facies-dependent nature of certain of the palynological assemblage zones. The pattern of palynological events in East Greenland has also been recognised on the mid-Norwegian shelf

Palynostratigraphy and palaeoenvironment of the Middle Jurassic Sortehat Formation (Neill Klinter Group), Jameson Land, East Greenland

The grey–black mudstones of the Sortehat Formation form part of the Middle Jurassic fill of the Jameson Land Basin in East Greenland. The formation is exposed in the southernmost part of the north–south-trending, Mesozoic rift system in East Greenland that was part of the epeiric seaway between East Greenland and Norway. Sedimentological observations of the Sortehat Formation indicate deposition in an offshore marine setting that was typically low energy and periodically oxygen-deficient but was influenced by storm currents on occasion. Detailed palynological studies of the Sortehat Formation have resulted in the definition of three palynological assemblage zones recognised at four localities, namely Enhjørningen Dal and Pelion (north Jameson Land), the type section at Sortehat (central Jameson Land) and Albuen at Neill Klinter along Hurry Inlet (south-east Jameson Land). In stratigraphic order, these zones are termed the Botryococcus Assemblage Zone, the Nannoceratopsis gracilis – Nannoceratopsis senex Assemblage Zone, and the Sentusidinium pelionense Assemblage Zone. They are recognised on the basis of the identification of approximately 110 species of palynomorphs, including 45 species of spores, 30 of pollen, 22 of dinoflagellate cysts, 10 acritarch species, two species of algae, and some fungal spores. An Aalenian – ?Early Bajocian age is suggested for the Sortehat Formation on the basis of the palynoflora. Interpretation of the palynomorph assemblages suggests that the formation accumulated in a shallow, brackish marine environment. A significant terrestrial input, including the freshwater green alga Botryococcus, is recorded in the lower part of the formation and interpreted as an allochthonous accumulation in an offshore marine environment related to transgression of a low-lying coastal plain. A marked shift in the palynomorph assemblage seen by diversification of marine microplankton above the base of the formation, indicates an increase in the marine signal probably related to the onset of highstand conditions following the marine transgression

Early and Middle Jurassic mires of Bornholm and the Fennoscandian Border Zone: a comparison of depositional environments and vegetation

Suitable climatic conditions for peat formation existed during Early–Middle Jurassic times in the Fennoscandian Border Zone. Autochthonous peat and allochthonous organic matter were deposited from north Jylland, south-east through the Kattegat and Øresund area, to Skåne and Bornholm. The increase in coal seam abundance and thickness from north Jylland to Bornholm indicates that the most favourable peat-forming conditions were present towards the south-east. Peat formation and deposition of organic-rich muds in the Early Jurassic coastal mires were mainly controlled by a continuous rise of relative sea level governed by subsidence and an overall eustatic rise. Watertable rise repeatedly outpaced the rate of accumulation of organic matter and terminated peat formation by lacustrine or lagoonal flooding. Organic matter accumulated in open-water mires and in continuously waterlogged, anoxic and periodically marine-influenced mires. The latter conditions resulted in huminite-rich coals containing framboidal pyrite. The investigated Lower Jurassic seams correspond to peat and peaty mud deposits that ranged from 0.5–5.7 m in thickness, but were generally less than 3 m thick. It is estimated that on Bornholm, the mires existed on average for c. 1200 years in the Hettangian–Sinemurian and for c. 2300 years in the Late Pliensbachian; the Early Jurassic (Hettangian–Sinemurian) mires in the Øresund area existed for c. 1850 years. Aalenian uplift of the Ringkøbing–Fyn High and major parts of the Danish Basin caused a significant change in the basin configuration and much reduced subsidence in the Fennoscandian Border Zone during the Middle Jurassic. This resulted in a more inland position for the Middle Jurassic mires which on occasion enabled peat accumulation to keep pace with, or temporarily outpace, watertable rise. Thus, peat formation was sometimes sustained for relatively long periods, and the mires may have existed for up to 7000 years in the Øresund area, and up to 19 000 years on Bornholm. The combination of the inland position of the mires, a seasonal climate, and on occasion a peat surface above groundwater level caused temporary oxidation of the peat surfaces and formation of inertinite-rich coals. The spore and pollen assemblages from coal seams and interbedded siliciclastic deposits indicate that the dominant plant groups in both the Early and Middle Jurassic mires were ferns and gymnosperms. However, significant floral differences are evident. In the Lower Jurassic coals, the palynology testifies to a vegetation rich in cycadophytes and coniferophytes (Taxodiaceae family) whereas club mosses were of lesser importance. Conversely, in the Middle Jurassic coals, the palynology indicates an absence of cycadophytes, a minor proportion of coniferophytes (Taxodiaceae) and a significant proportion of club mosses. These variations are probably related to adaptation by different plants to varying environmental conditions, in particular of hydrological character

Synthesis of pyrrolidine-based oxy-peptide nucleic acids carrying four types of nucleobases and their transport into cytoplasm

We synthesized 16 pyrrolidine-based oxy-peptide nucleic acid (POPNA) monomers carrying four different nucleobases onto four different stereoisomers of pyrrolidine rings. Using these monomers, we prepared POPNA oligomers, which formed sequence-specific hybrids with DNAs. The oligomer configurations influenced the hybrid stability. The oligomers were not taken into CHO cells. However, they could enter the cell cytoplasm when mixed with the influenza virus hemagglutinin peptide-arginine heptamer conjugate

The Lower–Middle Jurassic of the Anholt borehole: implications for the geological evolution of the eastern margin of the Danish Basin

This study of Upper Pliensbachian – Bajocian/Bathonian deposits in a borehole drilled on the island of Anholt, Denmark incorporates sedimentology, biostratigraphy (palynomorphs and foraminifera), palaeomagnetism and coal petrology. The studied succession records a gradual change from marine inner shelf storm-influenced clays to mainly terrestrial sands, clays, and lignite containing a flora of mainly freshwater algae and pollen. The regression was initiated at the Pliensbachian–Toarcian boundary and marine influence ceased during Bajocian–Bathonian times; the regression thus took place earlier at Anholt than in the centre of the Danish Basin. The sediments in the Anholt borehole are referred to the Fjerritslev and Haldager Sand Formations. Although the Lower–Middle Jurassic boundary is commonly placed at the boundary between the two formations, our data indicate that at Anholt the upper Fjerritslev Formation (member F-IV) is of Aalenian age. The Lower–Middle Jurassic boundary occurs close to the boundary between members F-III and F-IV of the Fjerritslev Formation. In contrast to other Lower–Middle Jurassic successions in the North Sea region, smectites of inferred volcanic origin are preserved in the Anholt section, suggesting limited burial and hence less intense diagenetic illitisation or chloritisation of smectites. A down-hole increase in diagenetic influence is reflected by the increase down-section both in the thermal stability of kaolinite and in the vitrinite reflectance. Kaolinite of inferred authigenic origin forms a white powder in the quartz-dominated sands of the Haldager Sand Formation; this kaolinite is thermally very unstable and is interpreted to be of late diagenetic, post-uplift origin. The vitrinite reflectance data indicate that the Jurassic formations have been exposed to thermal maturation corresponding to burial to a depth of 1000–1200 m below their present depth. Post-maturation uplift of the order of 1 km probably occurred partly during Late Cretaceous – Paleocene inversion in the Kattegat area and partly during Oligocene–Recent regional uplift, the latter being the most important of the two uplift phases. Palaeomagnetic data indicate that the main carrier of magnetic remanence is fine-grained magnetite. The stable remanence shows a pronounced inclination shallowing, which is attributed to post-depositional compaction

A direct association between amber and dinosaur remains provides paleoecological insights

This work is licensed under a Creative Commons Attribution 4.0 International License.Hadrosaurian dinosaurs were abundant in the Late Cretaceous of North America, but their habitats remain poorly understood. Cretaceous amber is also relatively abundant, yet it is seldom found in direct stratigraphic association with dinosaur remains. Here we describe an unusually large amber specimen attached to a Prosaurolophus jaw, which reveals details of the contemporaneous paleoforest and entomofauna. Fourier-transform Infrared spectroscopy and stable isotope composition (H and C) suggest the amber formed from resins exuded by cupressaceous conifers occupying a coastal plain. An aphid within the amber belongs to Cretamyzidae, a Cretaceous family suggested to bark-feed on conifers. Distinct tooth row impressions on the amber match the hadrosaur’s alveolar bone ridges, providing some insight into the taphonomic processes that brought these remains together

A new ankylosaurid skeleton from the Upper Cretaceous Baruungoyot Formation of Mongolia: its implications for ankylosaurid postcranial evolution

A new articulated postcranial specimen of an indeterminate ankylosaurid dinosaur from the Upper Cretaceous (middle-upper Campanian) Baruungoyot Formation from Hermiin Tsav, southern Gobi Desert, Mongolia includes twelve dorsal vertebrae, ribs, pectoral girdles, forelimbs, pelvic girdles, hind limbs, and free osteoderms. The new specimen shows that Asian ankylosaurids evolved rigid bodies with a decreased number of pedal phalanges. It also implies that there were at least two forms of fank armor within Ankylosauridae, one with spine-like osteoderms and the other with keeled rhomboidal osteoderms. Unique anatomical features related to digging are present in Ankylosauridae, such as dorsoventrally fattened and fusiform body shapes, extensively fused series of vertebrae, anteroposteriorly broadened dorsal ribs, a robust humerus with a well-developed deltopectoral crest, a short robust ulna with a well-developed olecranon process, a trowel-like manus, and decreased numbers of pedal phalanges. Although not fossorial, ankylosaurids were likely able to dig the substrate, taking advantage of it for self-defence and survival

Chiral introduction of positive charges to PNA for double-duplex invasion to versatile sequences

Invasion of two PNA strands to double-stranded DNA is one of the most promising methods to recognize a predetermined site in double-stranded DNA (PNA = peptide nucleic acid). In order to facilitate this ‘double-duplex invasion’, a new type of PNA was prepared by using chiral PNA monomers in which a nucleobase was bound to the α-nitrogen of N-(2-aminoethyl)-d-lysine. These positively charged monomer units, introduced to defined positions in Nielsen's PNAs (poly[N-(2-aminoethyl)glycine] derivatives), promoted the invasion without impairing mismatch-recognizing activity. When pseudo-complementary nucleobases 2,6-diaminopurine and 2-thiouracil were bound to N-(2-aminoethyl)-d-lysine, the invasion successfully occurred even at highly G–C-rich regions [e.g. (G/C)7(A/T)3 and (G/C)8(A/T)2] which were otherwise hardly targeted. Thus, the scope of sequences available as the target site has been greatly expanded. In contrast with the promotion by the chiral PNA monomers derived from N-(2-aminoethyl)-d-lysine, their l-isomers hardly invaded, showing crucial importance of the d-chirality. The promotion of double-duplex invasion by the chiral (d) PNA monomer units was ascribed to both destabilization of PNA/PNA duplex and stabilization of PNA/DNA duplexes

Efficient splicing correction by PNA conjugation to an R6-Penetratin delivery peptide

Sequence-specific interference with the nuclear pre-mRNA splicing machinery has received increased attention as an analytical tool and for development of therapeutics. It requires sequence-specific and high affinity binding of RNaseH-incompetent DNA mimics to pre-mRNA. Peptide nucleic acids (PNA) or phosphoramidate morpholino oligonucleotides (PMO) are particularly suited as steric block oligonucleotides in this respect. However, splicing correction by PNA or PMO conjugated to cell penetrating peptides (CPP), such as Tat or Penetratin, has required high concentrations (5–10 μM) of such conjugates, unless an endosomolytic agent was added to increase escape from endocytic vesicles. We have focused on the modification of existing CPPs to search for peptides able to deliver more efficiently splice correcting PNA or PMO to the nucleus in the absence of endosomolytic agents. We describe here R6-Penetratin (in which arginine-residues were added to the N-terminus of Penetratin) as the most active of all CPPs tested so far in a splicing correction assay in which masking of a cryptic splice site allows expression of a luciferase reporter gene. Efficient and sequence-specific correction occurs at 1 μM concentration of the R6Pen–PNA705 conjugate as monitored by luciferase luminescence and by RT-PCR. Some aspects of the R6Pen–PNA705 structure–function relationship have also been evaluated