Additional file 1: of Algorithms for reconstruction of chromosomal structures

#1 (Standard and extra operations allowed to transform initial structures and the joint graph); #2 (Figurs to the algorithm of transforming a joint graph into the final form: the case of different operation weights and all operations.); #3 (Reconstruction of chromosome structures in plastids of rhodophytic branch along the tree of their evolution shown in Fig.  6 , Tables S3 a and S3 b .). (DOCX 679 kb