Physical Condition in Wandoat Right Bank of the Kako River Mouth, Japan

Source: ICHE Conference Archive - https://mdi-de.baw.de/icheArchiv

Study on Drifted Objects Around the Coast of The Narugashima Island in Japan

Source: ICHE Conference Archive - https://mdi-de.baw.de/icheArchiv

Evaluation of FilmArray respiratory panel multiplex polymerase chain reaction assay for detection of pathogens in adult outpatients with acute respiratory tract infection

Although viruses are the major pathogen that causes upper respiratory tract infection (URTI) and acute bronchitis, antibiotics have been prescribed. This was a prospective observational study in influenza epidemics that enrolled adult outpatients who visited a hospital with respiratory tract infection symptoms. In this study, we evaluated the usefulness of FilmArray respiratory panel (RP). Fifty patients were enrolled. FilmArray RP detected the pathogens in 28 patients. The common pathogens were influenza virus (n = 14), respiratory syncytial virus (n = 6), and human rhinovirus (n = 6). Of the 14 patients with influenza virus, 6 were negative for the antigen test. The physicians diagnosed and treated the patients without the result of FilmArray in this study. Of the patients with positive FilmArray RP, 9 were treated with antibiotics; however, bacteria were detected in only 3 patients. By implementing FilmArray RP, URTI and acute bronchitis would be precisely diagnosed, and inappropriate use of antibiotics can be reduced

Carbon dioxide uptake in a eutrophic stratified reservoir: Freshwater carbon sequestration potential

Carbon capture and storage due to photosynthesis activities has been proposed as a carbon sink to mitigate climate change. To enhance such mitigation, previous studies have shown that freshwater lakes should be included in the carbon sink, since they may capture as much carbon as coastal areas. In eutrophic freshwater lakes, there is uncertainty about whether the equilibrium equation can estimate the partial pressure of carbon dioxide (pCO2), owing to the presence of photosynthesis due to phytoplankton, and pH measurement error in freshwater fluid. Thus, this study investigated the applicability of the equilibrium equation and revealed the need to modify it. The modified equilibrium equation was successfully applied to reproduce pCO2 based on total alkalinity and pH through field observations. In addition, pCO2 at the water surface was lower than the atmospheric partial pressure of carbon dioxide due to photosynthesis by phytoplankton during strong stratification. The stratification effect on low pCO2 was verified by using the Net Ecosystem Production (NEP) model, and a submerged freshwater plants such as Potamogeton malaianus were found to have high potential for dissolved inorganic carbon (DIC) sequestration in a freshwater lake. These results should provide a starting point toward more sophisticated methods to investigate the effect of freshwater carbon on DIC uptake in freshwater stratified eutrophic lakes

A complex dominance hierarchy is controlled by polymorphism of small RNAs and their targets

In diploid organisms, phenotypic traits are often biased by effects known as Mendelian dominant–recessive interactions between inherited alleles. Phenotypic expression of SP11 alleles, which encodes the male determinants of self-incompatibility in Brassica rapa, is governed by a complex dominance hierarchy1–3. Here, we show that a single polymorphic 24 nucleotide small RNA, named SP11 methylation inducer 2 (Smi2), controls the linear dominance hierarchy of the four SP11 alleles (S44 > S60 > S40 > S29). In all dominant–recessive interactions, small RNA variants derived from the linked region of dominant SP11 alleles exhibited high sequence similarity to the promoter regions of recessive SP11 alleles and acted in trans to epigenetically silence their expression. Together with our previous study4, we propose a new model: sequence similarity between polymorphic small RNAs and their target regulates mono-allelic gene expression, which explains the entire five-phased linear dominance hierarchy of the SP11 phenotypic expression in Brassica

Evaluation of a novel rapid TRC assay for the detection of influenza using nasopharyngeal swabs and gargle samples

We evaluated a novel transcription-reverse transcription concerted reaction (TRC) assay that can detect influenza A and B within 15 min using nasopharyngeal swab and gargle samples obtained from patients with influenza-like illness, between January and March 2018 and between January and March 2019. Based on the combined RT-PCR and sequencing results, in the nasal swabs, the sensitivity and specificity of TRC for detecting influenza were calculated as 1.000 and 1.000, respectively. In the gargle samples, the sensitivity and specificity of TRC were 0.946 and 1.000, respectively. The TRC assay showed comparable performance to RT-PCR in the detection of influenza viruses