Silicon oxynitride based photonics

Silicon oxynitride is a very attractive material for integrated optics. Besides possessing excellent optical properties it can be deposited with refractive indices varying over a wide range by tuning the material composition. In this contribution we will summarize the key properties of this material class and discuss several application examples. Preliminary results on novel processes, which will lead to largely reduced hydrogen incorporation and enable reflow of SiON material, are being presented

White-light toxicity, resulting from systemically administered 5-aminolevulinic acid, under normal operating conditions

This study has investigated damage to the intraperitoneal organs of the rat after systemic (intraperitoneal and intravenous) administration of low doses of 5-aminolevulinic acid (ALA) and illumination with a standard white-light operating-room (o.r.) lamp. The study has been done within the framework of a larger study in which the possibility of using ALA for localization of small-volume macroscopically non-visible peritoneal metastasis of ovarian tumors is being investigated. Fluorescence diagnostics are done in addition to the standard staging and localization procedures, either through a laparoscope or during laparotomy. In these circumstances, fluorescence diagnostics involve some risk of photosensitization of critical organs since a broad-band (o.r.) light source is used during the surgical procedures for illumination of the operating area. The drug dose and the time interval between administration of ALA and illumination are varied and normal tissues are examined both macroscopically and microscopically for damage. A relationship is demonstrated between the maximum tolerable dose (MTD) of ALA (defined as the dose that does not cause any tissue damage) and the time interval between administration and illumination. The white light that is used for illumination of the operating area is sufficient to induce damage to the peritoneal organs at relatively low ALA doses. The MDTs for 2, 6 and 16 h intervals are found to be respectively 1, 10 and 100 mg kg-1. The results are similar for both intraperitoneal and intravenous administration

A calculation of the QCD phase diagram at finite temperature, and baryon and isospin chemical potentials

We study the phases of a two-flavor Nambu-Jona-Lasinio model at finite temperature $T$, baryon and isospin chemical potentials: $\mu_{B}=(\mu_{u}+\mu_{d})/2$, $\mu_{I}=(\mu_{u}-\mu_{d})/2$. This study completes a previous analysis where only small isospin chemical potentials $\mu_{I}$ were consideredComment: 21 pages, 13 figures included, two more refernces adde

Stilling project: advances in the compilation and homogenization of historical wind speed data for the assessment of the stilling phenomenon

Póster presentado en: EGU General Assembly 2018 celebrada del 8 al 13 de abril en Viena, Austria.During the last decade scientists have reported a terrestrial slowdown in wind speed across the world. This weakening in wind speed has been recently termed the “stilling” phenomenon, with a worldwide average trend of -0.140 m s-1 decade-1 reported since the 1960s. The precise causes of this “stilling” remain largely uncertain and have been hypothetically attributed to several factors, mainly related to an increase in surface roughness (i.e. forest growth, land use changes, and urbanization) with little attention paid to changes in atmospheric circulation. Unlike this “stilling” over land, satellite measurements have revealed that wind speed has increased over ocean surfaces, which introduces uncertainty to the “stilling” debate. Therefore, scientists are currently debating if global warming has and will impact on changes in wind speed.The uncertainty on the causes driving the “stilling” over land is mainly due to short availability (i.e. since the 1960s) and low quality of observed wind speed records as stated by the Fifth Assessment Report (AR5) of the Intergovernmental Panel on Climate Change (IPCC) and the recent report “State of the Climate in 2015” . The main objective of the ongoing EU funded project STILLING (MSCAIF-2015 GA-703733) is to fill the key gap of short availability and low quality of wind speed datasets, and improve the limited knowledge on the causes driving the “stilling” in a climate change scenario. This has not yet been addressed by the scientific community due to (i) scientists have traditionally paid little attention on variability of wind speed; (ii) digitization of climate series at National Weather Services (NWS) systematically started in the 1960s, however, some longer but isolated past wind speed records are available for scientists to be rescued and analyzed; and (iii) efforts on advances in homogenization algorithms to improve quality of wind speed series have been scarce. The STILLING project covers a novel research niche on the “stilling” debate, and this contribution will present the advances in the compilation and homogenization of historical wind speed data (prior to the 1960s) to better assess trends/cycles and causes on multidecadal time periods and reliable datasets than previous studies.This research has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 703733 (STILLING project)

The Energetics of Li Off-Centering in K1−x_{1-x}Lix_xTaO3_3; First Principles Calculations

K$_{1-x}$Li$_{x}$TaO$_3$ (KLT) solid solutions exhibit a variety of interesting physical phenomena related to large displacements of Li-ions from ideal perovskite A-site positions. First-principles calculations for KLT supercells were used to investigate these phenomena. Lattice dynamics calculations for KLT exhibit a Li off-centering instability. The energetics of Li-displacements for isolated Li-ions and for Li-Li pairs up to 4th neighbors were calculated. Interactions between nearest neighbor Li-ions, in a Li-Li pair, strongly favor ferroelectric alignment along the pair axis. Such Li-Li pairs can be considered "seeds" for polar nanoclusters in KLT. Electrostriction, local oxygen relaxation, coupling to the KT soft-mode, and interactions with neighboring Li-ions all enhance the polarization from Li off-centering. Calculated hopping barriers for isolated Li-ions and for nearest neighbor Li-Li pairs are in good agreement with Arrhenius fits to experimental dielectric data.Comment: 14 pages including 10 figures. To Physical Review B. Replaced after corrections due to referees' remark

Brane-skyrmions and wrapped states

In the context of a brane world and including an induced curvature term in the brane action, we obtain the effective lagrangian for the Goldstone bosons (branons) associated with the spontaneous breaking of the translational invariance in the bulk. In addition to the branons, this effective action has Skyrmion-like solitonic states which can be understood as holes in the brane. We study their main properties such as mass and size, the Skyrmion-branon interaction and their possible fermionic quantization. We also consider states where the brane is wrapped around the extra dimensions and their relation with the brane-skyrmions. Finally, we extend our results to higher-dimensional branes, such as those appearing in M-theory, where brane-skyrmions could also be present.Comment: 35 pages, 7 figures. Revised version. Appendix and new references included. To appear in Phys. Rev.

Chaotic Inflationary Universe on Brane

The chaotic inflationary model of the early universe, proposed by Linde is explored in the brane world considering matter described by a minimally coupled self interacting scalar field. We obtain cosmological solutions which admit evolution of a universe either from a singularity or without a singularity. It is found that a very weakly coupled self-interacting scalar field is necessary for a quartic type potential in the brane world model compared to that necessary in general relativity. In the brane world sufficient inflation may be obtained even with an initial scalar field having value less than the Planck scale. It is found that if the universe is kinetic energy dominated to begin with, it transits to an inflationary stage subsequently.Comment: 13 pages, no fig., accepted in Physical Review

The impact of nature of onset of pain and posttraumatic stress on adjustment to chronic pain and treatment outcome

Despite the demonstrated efficacy of cognitive-behavioural therapy for chronic pain, recent research has attempted to identify predictors of treatment outcome in order to improve the effectiveness of such treatments. This research has indicated that variables such as the nature of the onset of the pain and psychopathology are associated with poor adjustment to chronic pain. Accordingly, these variables might also be predictive of poor response to treatment. Individuals who experience a sudden onset of pain following an injury or accident, particularly when the instigating event is experienced as psychologically traumatic, may present for treatment with high levels of distress, including symptoms consistent with a posttraumatic stress response. The impact of this type of onset of pain and posttraumatic stress symptoms on adjustment to chronic pain and treatment outcome is the focus of this thesis. Three studies were conducted to clarify and extend earlier research findings in this area. Using 536 patients referred for treatment in a tertiary referral pain management centre, the first study examined the psychometric properties of a widely used self-report measure of posttraumatic stress symptoms (the PTSD Checklist, or PCL), modified for use in a chronic pain sample. This study provided preliminary support for the suitability of the PCL as a self-report measure of Posttraumatic Stress Disorder (PTSD) symptoms in chronic pain patients. However, the study also highlighted a number of issues with the use of self-report measures of posttraumatic stress symptoms in chronic pain patient samples. In particular, PCL items enquiring about symptoms which are a common aspect of the chronic pain experience (e.g. irritability, sleep problems) appeared to contribute to high mean scores on the PCL Avoidance and Arousal subscales. Furthermore, application of diagnostic cut-off scores and an algorithm recommended for the PCL in other trauma groups suggested that a much larger proportion of the sample was identified as potentially meeting diagnostic criteria for PTSD than would have been expected from previous research. The second study utilised the modified PCL to investigate the impact of different types of onset of pain (e.g. traumatic onset) and posttraumatic stress symptoms on adjustment to chronic pain in a sample of 196 chronic pain patients referred to the same centre. For patients who experienced the onset of pain related to a specific event, two independent experts in the field of PTSD determined whether these events satisfied the definition of a traumatic event according to DSM-IV diagnostic criteria. Adjustment was assessed through a number of validated measures of mood, disability, pain experience, and pain-related cognitions. Contrary to expectations, comparisons between patients who had experienced different types of onset of pain revealed few significant differences between them. That is, analyses comparing patients presenting with accident-related pain, or pain related to other specific events, to patients who had experienced spontaneous or insidious onset of pain revealed no significant differences between the groups on measures of pain severity, pain-related disability, and symptoms of affective distress after adjustment for age, pain duration, and compensation status. Similarly, comparisons between patients who had experienced a potentially traumatic onset of pain with those who had experienced a non-traumatic or spontaneous or insidious onset of pain also revealed no significant differences on the aforementioned variables. In contrast, compensation status, age, and a number of cognitive variables were significant predictors of pain severity, pain-related disability, and depression. The final study investigated the impact of type of pain onset and posttraumatic stress symptoms on response to a multidisciplinary cognitive-behavioural pain management program. Unlike the previous study, this treatment outcome study revealed a number of differences between onset groups. Most notably, patients who had experienced an insidious or spontaneous onset of pain reported greater improvements in pain severity and maintained these improvements more effectively over a one month period than patients who had experienced pain in the context of an accident or other specific incident. There was also limited evidence that improvements in depression favoured patients who had experienced an insidious or spontaneous and non-traumatic onset of pain. Consistent with this, posttraumatic stress symptoms were a significant predictor of treatment outcome, with higher levels of symptoms being associated with smaller improvements in pain-related disability and distress. Notably, this study also revealed that certain cognitive variables (i.e. catastrophising, self-efficacy, and fear-avoidance beliefs) were also significant predictors of treatment outcome, consistent with previous findings in the pain literature. This provided some perspective on the relative roles of both PTSD symptoms and cognitive variables in adjustment to persisting pain and treatment response. These findings were all consistent with expectations and with previous research. Implications for future research and for the assessment and treatment of chronic pain patients who present with posttraumatic stress symptoms are discussed

Endosymbiosis in trypanosomatids: the genomic cooperation between bacterium and host in the synthesis of essential amino acids is heavily influenced by multiple horizontal gene transfers

Background Trypanosomatids of the genera Angomonas and Strigomonas live in a mutualistic association characterized by extensive metabolic cooperation with obligate endosymbiotic Betaproteobacteria. However, the role played by the symbiont has been more guessed by indirect means than evidenced. Symbiont-harboring trypanosomatids, in contrast to their counterparts lacking symbionts, exhibit lower nutritional requirements and are autotrophic for essential amino acids. To evidence the symbiont’s contributions to this autotrophy, entire genomes of symbionts and trypanosomatids with and without symbionts were sequenced here. Results Analyses of the essential amino acid pathways revealed that most biosynthetic routes are in the symbiont genome. By contrast, the host trypanosomatid genome contains fewer genes, about half of which originated from different bacterial groups, perhaps only one of which (ornithine cyclodeaminase, EC:4.3.1.12) derived from the symbiont. Nutritional, enzymatic, and genomic data were jointly analyzed to construct an integrated view of essential amino acid metabolism in symbiont-harboring trypanosomatids. This comprehensive analysis showed perfect concordance among all these data, and revealed that the symbiont contains genes for enzymes that complete essential biosynthetic routes for the host amino acid production, thus explaining the low requirement for these elements in symbiont-harboring trypanosomatids. Phylogenetic analyses show that the cooperation between symbionts and their hosts is complemented by multiple horizontal gene transfers, from bacterial lineages to trypanosomatids, that occurred several times in the course of their evolution. Transfers occur preferentially in parts of the pathways that are missing from other eukaryotes. Conclusion We have herein uncovered the genetic and evolutionary bases of essential amino acid biosynthesis in several trypanosomatids with and without endosymbionts, explaining and complementing decades of experimental results. We uncovered the remarkable plasticity in essential amino acid biosynthesis pathway evolution in these protozoans, demonstrating heavy influence of horizontal gene transfer events, from Bacteria to trypanosomatid nuclei, in the evolution of these pathways