Morphological distinctiveness between Solanum aethiopicum Shum group and its progenitor

This paper invested on the use of morphological markers offers an alternative in germplasm discrimination of research-neglected crop species.Use of morphological markers offers an alternative in germplasm discrimination of research-neglected crop species. A collection of 25 accessions including five wild progenitors was evaluated in screen house to identify the morphological difference between Solanum aethiopicum Shum and Solanum anguivi. An Unweighted Pair Group Method with Arithmetic mean hierarchical clustering revealed presence of moderate structure with a cophenetic correlation coefficient of 0.73. Five distinct clusters were produced; the progenitor accessions for the S. aethiopicum Shum were grouped in their own cluster. The Richness, Shannon-Weaver and Simpson indices were also different among qualitative variable categories. A ‘prcomp’ function based Principal component analysis (PCA) in R on quantitative variables indicated that days to germination and emergence, cotyledonous leaf length, cotyledonous leaf width, shoot biomass, plant height, petiole length, days to first flowering opening, plant width, plant branching, and number of leaves per plant are the major drivers of variability in the study accessions. Further, results from canonical discriminant analysis to discern between the S. aethiopicum and its progenitor accession groups showed that the days to germination and emergence provide the best separation; with the former emerging earlier than the latter. The mean values for flowering time, leaves per plant, number of branches per plant and plant height were more favorable for the Shum than its wild progenitor accessions. The study revealed that morphological markers are useful in distinguishing between the S. aethiopicum Shum and its progenitor accessions

Effect of different processing conditions on proximate and bioactive contents of Solanum aethiopicum (Shum) powders, and acceptability for cottage scale production

The purpose of this study was to investigate the effects of different processing conditions for production of dried Solanum aethiopicum (S.) leaf powder by comparing solar drying and cabinet drying processing techniques. Four (4) pre-treatments were done on S. aethiopicum leaves to inhibit enzyme action and prolong storage life. Treatments included dipping in; 10% saline solution, 10% vinegar solution, water (as the control), and steam blanching; done for both whole and sliced S. aethiopicum leaves. Each of the resultant samples were dried in both solar and cabinet dryers for a period of 24 hours. The dried leaf samples were grounded into powder using a coffee grinder and subjected to different laboratory analyses including; catalase activity, moisture content, vitamin C retention capacity and phytate content analyses. The results obtained were analysed using MINITAB version 16.0 at 5% significance level. The results showed that there was a reduction in catalase activity after pre-treatment and drying from 5.0±0.0 cm3 for the fresh un-treated leaves to a range of 4.5±0.7 – 3.0±0.0 cm3 for whole solar dried; 4.5±0.7-4.0±0.0 cm3 for sliced solar dried; 4.0±0.0 - 3.0±0.0 cm3 for whole cabinet dried and 3.5±0.7-2.3±0.7 cm3 for sliced cabinet dried leaf powder. Solar dried S. aethiopicum leaf powder contained significantly high moisture content than hot air cabinet dried one (24.9±0.5 % for saline treated sliced leaves to 8.9±0.8 % for blanched sliced leaves, than hot air cabinet dried one with 9.3±0.0 % for sliced plain water treated leaves to 7.0±0.2 % for sliced vinegar treated leaves; respectively). Cabinet dried S. aethiopicum contained significantly more vitamin C content (1.1±0.2 mg for whole blanched leaves compared to 0.6±0.1 mg for sliced vinegar treated leaves) than the solar dried one (1.0±0.2 mg for sliced plain water treated leaves to 0.6±0.1 mg for sliced vinegar treated leaves). There was no significant difference in phytate content between the hot air cabinet dried and solar dried i.e. 0.7±0.1 - 0.2±0.1 mg for solar and 0.7±0.1 - 0.3±0.3 mg for cabinet dried. Solar dried S. aethiopicum powder contained significantly higher catalase than the hot air cabinet dried one (4.5±0.7 - 3.0±0.0 and 4.0±0.0 - 2.5±0.7 cm3; respectively). However, in terms of acceptability, there was high preference for saline treated leaf powder soups compared to other soups. It can be concluded that High activity of catalase, moisture retention and high loss of Vit.C occurs in the solar drier than in cabinet drier. Whole leaf saline pretreated leaf powder soup is rated high compared to other dried soups. Therefore, the best method for production of dried S. aethiopicum powder is by slicing, dipping it in plain water and drying using a cabinet dryer. Under circumstances where cabinet drying is not achievable, solar drying is recommended using whole leaf, pretreated with saline water to promote preservation and consumption of the vegetable

Pregnancy and Infant Outcomes among HIV-Infected Women Taking Long-Term ART with and without Tenofovir in the DART Trial

Diana Gibb and colleagues investigate the effect of in utero tenofovir exposure by analyzing the pregnancy and infant outcomes of HIV-infected women enrolled in the DART trial

Genetic and Root Growth Studies in Cassava (Manihot esculenta Crantz): Implications for Breeding

This thesis was submitted for the degree of Doctor of Philosophy in the Department of Plant Biology and Forest Genetics, Faculty of Natural Resources and Agricultural Sciences. Swedish University of Agricultural Sciences Uppsala 2006Cassava (Manihot esculenta Crantz) is a perennial tropical crop grown for its starchcontaining tuberous roots. It is cultivated mainly by small-scale farmers and consumed daily by an estimated 500 million people. Cassava mosaic disease (CMD) has long been recognized as a major limiting factor to cassava production in Africa and severe epidemics hit Uganda in the late 1920’s and late 1980’s. In spite of its importance as a major food crop it is the least researched major crop and many questions regarding its genetics are still unresolved. This thesis has therefore dealt with studies on: i) the effect of CMD on the genetic diversity of cassava in Uganda, ii) the composition of varieties and the genetic structure within and between varieties on small farms in Uganda, iii) the genetic basis of two agronomic important traits, cyanogenic glucoside potential (CNP) and dry matter content (DMC) in cassava roots, using quantitative trait loci (QTL) mapping and iv) the effect of nutrient availability on the growth and tuber formation. The outcome of these studies is relevant for developing strategies for breeding and gene conservation programmes. CMD did not have a strong selective effect on the genetic diversity of cassava in Uganda in spite of earlier reports on losses of varieties due to the latest CMD epidemic. However, a loss of rare alleles in areas with high CMD incidence in Uganda was found. The composition of varieties differed widely between villages and districts and the genetic variation was surprisingly large within varieties although the variation was larger among varieties. The like-named varieties in different villages were genetically similar, demonstrating farmers’ ability to differentiate and maintain the same variety over large areas. We detected two QTL on two different linkage groups controlling CNP and six QTL on four different linkage groups controlling DMC. One QTL for CNP and one QTL for DMC mapped near each other, suggesting pleiotrophy or linkage of QTL. In the root studies, production of storage roots was found to be regulated by nutrient availability and appeared to be positively affected by a gradually increasing limitation of mineral nutrients during the growth of the plants

Performance of Solanum aethiopicum Shum group accessions under repetitive drought stress.

Drought is a serious climatic hazard to crop production, more especially when it occurs repeatedly. This created a need to identify repetitive drought tolerant varieties that recover following exposure to drought. Twenty accessions of Solanum aethiopicum Shum group were evaluated for their response to repeated drought exposure in a screen house at Uganda Christian University stressed and well-watered conditions in a split-plot arrangement. January, 2018.Drought is a serious climatic hazard to crop production, more especially when it occurs repeatedly. This created a need to identify repetitive drought tolerant varieties that recover following exposure to drought. Twenty accessions of Solanum aethiopicum Shum group were evaluated for their response to repeated drought exposure in a screen house at Uganda Christian University stressed and well-watered conditions in a split-plot arrangement. Data was collected on growth and yield parameters namely leaf area, plant canopy width, plant height, plant branching, fresh leaf weight, fresh shoot biomass, and harvest index. Exposure of plants to repetitive drought stress led to significant decrease in all evaluated growth parameters at p<0.001 except for plant branching. Similarly, yield parameters exhibited a highly significant difference among accessions and between water levels at p<0.001. Principal component analysis of growth rate traits showed that leaf area contributed to the highest variation for recovery from repetitive drought stress among accessions. The accessions that recovered best from drought stress include SAS108/2015, SAS163/P/2015, SAS183/G/2015, and SAS168/G/2015. For yield parameters, the accessions SAS137/2015, SAS148/2015, SAS108/P/2015, and SAS160/2015 had the highest dry shoot biomass. These findings indicate prospect for improvement of tolerance to repetitive drought stress in S. aethiopicum Shum group

Evaluation of Ugandan cassava germplasm for drought tolerance

This paper invested on the increased pressure on prime arable land for agriculture to meet food demand for global population has resulted in shifting agriculture to marginal areas where drought is frequentIncreased pressure on prime arable land for agriculture to meet food demand for global population has resulted in shifting agriculture to marginal areas where drought is frequent. Focusing research towards development of drought tolerant varieties is thus necessary. Replicated field trials for farmer preferred cassava genotypes were established to evaluate their morphological and yield trait responses and adaptability to moisture stress. Results showed significant (P<0.05) differences among genotypes for all the parameters evaluated. Moisture stress resulted in a decline in Harvest Index by 22.34%, Fresh Root Yield by 37.04%, Number of Roots by 19.43%, Dry matter content by 16.58%, Root starch content of 20.81%, Leaf Retention by 25.72% and Plant height by 16.62%. Results therefore, evidently showed that water stress has significant devastating effects on vegetative and yield parameters of cassava. Breeding strategies to develop drought tolerant cassava varieties to cope up with increased water scarcity and semi-arid conditions are thus paramount. Varietal variability in response to water stress reported is a cornerstone in the breeding process. Besides genetic effects were dominant indicating breeding objectives would be easily achieved. Genotypes MH96/0686, Magana, Yellow, TME 204, Nyamutukura, MH97/2961, NASE 1, NASE 2 and NASE 12 were least affected by drought and may provide gene sources for cassava improvement. Genotype x Location was significant (P<0.05) suggesting that rational distribution of genotypes to agro-ecological zones with different levels of drought stress is possible. Some genotypes had stable yield and its components suggesting that cassava can easily adapt to dry environment

Linear Discriminant Analysis of Structure Within African Eggplant ‘Shum’

This paper covers research on African eggplant which lags behind in research attention; leading to, among other gaps, scantiness of information on intra-group genetic diversity.African eggplant (Solanum aethiopicum) lags behind in terms of research attention; leading to, among other gaps,scantiness of information on intra-group genetic diversity. Hierarchical clustering was applied to reveal structure in a pioneer 20-entry set of S. aethiopicum Shum group accessions at Africa Solanaceae Research Network secretariat in Uganda, using 61 morpho-agronomic variables collected from a complete randomised design (CRD) with 12 plants per accession in screen-house. A MANOVA preceded linear discriminant analysis, to model each of 61 variables, as predicted by clusters and experiment to filter out non-significant traits. Four distinct clusters emerged, with a cophenetic relation coefficient of 0.87 (P<0.01). Canonical variates that best predicted the observed clusters include petiole length, sepal length (or seed color), fruit calyx length, seeds per fruit, leaf fresh weight (or leaves per plant), fruit fresh yield, seedling vigour, fruits per plant, harvest index and plant growth habit. Results suggest prospects for variety discrimination at various stages; seedling, vegetative and reproductive. The observed diversity will boost chances of effective selection for desired traits; while the canonical discriminant traits are potential morphological markers, within S. aethiopicum ‘Shum’ for a low-cost germplasm characterization approach

Effect of Different Rates of Poultry Manure and Bio-Slurry on the Yield of Solanum aethiopicum Shum

This research article covers findings carried out about the Poor soil fertility which are the major causes of low crop productivity on smallholder farms that are engaging in vegetable production in sub-Saharan Africa.Poor soil fertility remains the major cause of low crop productivity on smallholder farms that are engaging in vegetable production in sub-Saharan Africa. Appropriate soil fertility regimes are therefore critical for improving crop productivity. Its yield has remained low mainly due to poor soil fertility. A field experiment in two different seasons was planted in a Completely Randomized Block Design using Solanum aethiopicum Shum (Nakati). The treatments were 3 sole fertilizer options applied at the following rates: poultry manure and bio-slurry manure at 5, 10, 15, 20, 25 and 30 t ha-1, NPK (25:5:5) at the recommend application rate for tomato which is a sister crop and a control without any fertilizer. Crop budgets were used to determine the economic optimum rates of both sole applications of manure and combinations of manure with NPK. The sole applications and showed significantly (p ≤ 0.05) increased the yield of S. aethiopicum compared with the control. The established biological optimum rates were at 24.19 t ha-1 and 21.51 t ha-1 for poultry manure and bio-slurry respectively. Using the crop budgets it was concluded that the established economic optimum rates were 20 t ha-1 and 10 t ha-1 for sole poultry manure and bio-slurry respectively. Recommendations for use of sole poultry manure and bioslurry at the rate of 20 t ha-1 and 10 t ha-1 respectively were made

Heritability of drought resistance in Solanum aethiopicum Shum group and combining ability of genotypes for drought tolerance and recovery

This study examined the drought tolerance in a complex trait whose inheritance had not been investigated in Solanum aethiopicum L. Shum group.Drought tolerance is a complex trait whose inheritance had not been investigated in Solanum aethiopicum L. Shum group. This is partly because of perceived cross incompatibilities in the crop. This study relied on 24 successful crosses from an incomplete 9×4 North Carolina II mating design, evaluated under five watering conditions based on plant growth stage and watering level in order to determine the heritability of drought resistance and combining ability. Subsequent data analyses were based on restricted maximum likelihood. Overall, specific combining ability (SCA) effects were significant across and within watering environments for all study traits. The most highly heritable traits (in the narrow-sense) were identified as leaves per plant, chlorophyll content (CHL), leaf fresh yield and leaf dry yield while leaf area (LA), leaf relative water content (LRWC) and leaf mass area (LMA) were least heritable. However, the broad sense heritability (H2) was over 0.80 for seven of the traits, indicating that dominance gene action surpass additive gene effects for drought resistance in S. aethiopicum Shum. Further analysis showed that LA is suited for selection of best combiners under well-watered and drought-stress (DS) treatments. The LRWC served best in separating the SCA effects of crosses under DS. The CHL produced clear separations of SCA effects under both DS and drought recovery while LMA served best under the latter

The effect of cassava mosaic disease on the genetic diversity of cassava in Uganda

Cassava (Manihot esculenta) is a tropical crop that is grown in Africa, Latin America and Southeast Asia. Cassava was introduced from Latin America into West and East Africa at two independent events. In Uganda a serious threat to cassava’s survival is the cassava mosaic disease (CMD). Uganda has had two notable CMD epidemics since the introduction of cassava in the 1850s causing severe losses. SSR markers were used to study the effect of CMD on the genetic diversity in five agro-ecologies in Uganda with high and low incidence of CMD. Surprisingly, high gene diversity was detected. Most of the diversity was found within populations, while the diversity was very small among agro-ecological zones and the high and low CMD incidence areas. The high genetic diversity suggests a mechanism by which diversity is maintained by the active involvement of the Ugandan farmer in continuously testing and adopting new genotypes that will serve their diverse needs. However, in spite of the high genetic diversity we found a loss of rare alleles in areas with high CMD incidence. To study the effect of the introgression history on the gene pool the genetic differentiation between East and West Africa was also studied. Genetic similarities were found between the varieties in Uganda and Tanzania in East Africa and Ghana in West Africa. Thus, there is no evidence for a differentiation of the cassava gene pool into a western and an eastern genetic lineage. However, a possible difference in the genetic constitution of the introduced cassava into East and West Africa may have been diminished by germplasm movemen