Distribution of Cassava Bacterial Blight and Reaction of Selected Cassava Genotypes to the Disease in Kenya

Cassava bacterial blight (CBB) disease is an important bacterial disease of cassava. A study was carried out to determine the distribution of CBB in Kenya and to evaluate selected cassava genotypes for reaction to the disease. A survey was conducted in all the cassava growing regions within the country where cassava leaves showing symptoms of CBB were collected and isolated for biochemical characterization and PCR detection of the causal agent. The isolates were then used to determine the reaction of seven cassava genotypes to the disease. The disease was present in 17 out of the 21 counties surveyed. The bacteria extracted from the leaf samples conformed to all the biochemical and physiological tests specific to Xanthomonas axonopodis pv manihotis and to xanthomonads in general.  Polymerase chain reaction amplified the expected 500 base pairs fragment. Disease prevalence was highest in Kwale County at 100% Kilifi County recorded the highest incidence at 64%. All the genotypes evaluated in the greenhouse had area under disease progress curve (AUDPC) values higher than 52 which grouped them as susceptible. The study confirms the wide distribution of CBB in Kenya and the presence of the disease in the coast region, which was previously considered CBB free. The study also shows that some of the cassava genotypes being targeted for improvement by other projects are susceptible to the disease, and therefore the need consider resistance to CBB in developing improved cassava genotypes. Keywords: Cassava bacterial blight, Distribution, Resistance DOI: 10.7176/JNSR/9-4-0

Biocontrol-based strategies for improving soil health and managing plant-parasitic nematodes in coffee production

Coffee is an important commodity for Kenya, where production is steadily declining, despite a global rise in demand. Of the various constraints affecting production, plant-parasitic nematodes are a significant, but often overlooked, threat. As a perennial crop, treating plantations once infected with nematodes becomes difficult. The current study evaluated the drenching application of two biocontrol agents, Trichoderma asperellum and Purpureocillium lilacinum, for their nematode control efficacy, as well as their impact on the soil nematode community structure on mature, established coffee trees in Kenya. Seven Arabica coffee field trials were conducted over two years on trees of various ages. All the fields were heavily infested with Meloidogyne hapla, the first report of the species on coffee in Kenya. Both fungal biocontrol agents were detected endophytically infecting roots and recovered from soil but not until six months after initial applications. The population densities of M. hapla had significantly declined in roots of treated trees 12 months after the initial application, although soil nematode density data were similar across treatments. Based upon the maturity index and the Shannon index, treatment with T. asperellum led to improved soil health conditions and enrichment of diversity in the microbial community. Application of P. lilacinum, in particular, led to an increased abundance of fungivorous nematodes, especially Aphelenchus spp., for which P. lilacinum would appear to be a preferred food source. The soils in the trials were all stressed and denuded, however, which likely delayed the impact of such treatments or detection of any differences between treatments using indices, such as the functional metabolic footprint, over the period of study. A longer period of study would therefore likely provide a better indication of treatment benefits. The current study positively demonstrates, however, the potential for using biologically based options for the environmentally and climate-smart management of nematode threats in a sustainable manner on established, mature coffee plantations

Occurrence and management of two emerging soil-dwelling pests ravaging cabbage and onions in Kenya

Abstract Cabbage and Onion production in sub-Saharan Africa face numerous pest constraints that needs to be overcome to feed the rapidly growing population. This study aimed to establish the occurrence, incidence, and severity of soil-dwelling pests of cabbage and onions, and current management practices in five Counties of Kenya. Our findings revealed that most farmers grew hybrid vegetables on a small scale, which were highly dominated by various pest species (Delia platura, Maladera sp., and Agriotes sp. for cabbage and Atherigona orientalis and Urophorus humeralis for onion. The occurrence, incidence and severity of the various pest species on both crops varied considerably. Over 95% of the farmers relied on synthetic insecticides, which were applied weekly or bimonthly with limited success. Our findings demonstrate that invasive and polyphagous A. orientalis and D. platura were the most devastating pests of onion and cabbage without effective control options. Therefore, effective, sustainable, and affordable management strategies are required to control the spread of these pests to other crops in the region

Nematode Community-Based Soil Food Web Analysis of Ferralsol, Lithosol and Nitosol Soil Groups in Ghana, Kenya and Malawi Reveals Distinct Soil Health Degradations

Determining if the vast soil health degradations across the seven major soil groups (orders) of Sub-Saharan Africa (SSA) can be managed on the basis of a one-size-fits-all or location-specific approach is limited by a lack of soil group-based understanding of soil health degradations. We used the relationship between changes in nematode population dynamics relative to food and reproduction (enrichment, EI) and resistance to disturbance (structure, SI) indices to characterize the soil food web (SFW) and soil health conditions of Ferralsol, Lithosol and Nitosol soil groups in Ghana, Kenya and Malawi. We applied bivariate correlations of EI, SI, soil pH, soil organic carbon (SOC), and texture (sand, silt and clay) to identify integrated indicator parameters, and principal component analysis (PCA) to determine how all measured parameters, soil groups, and countries align. A total of 512 georeferenced soil samples from disturbed (agricultural) and undisturbed (natural vegetation) landscapes were analyzed. Nematode trophic group abundance was low and varied by soil group, landscape and country. The resource-limited and degraded SFW conditions separated by soil groups and by country. EI and SI correlation with SOC varied by landscape, soil group or country. PCA alignment showed separation of soil groups within and across countries. The study developed the first biophysicochemical proof-of-concept that the soil groups need to be treated separately when formulating scalable soil health management strategies in SSA