cBOTv7_sbsv2_allreps_log.gct

<p>cBOTv7_sbsv2_allreps_log.gct is the raw normalized and logged read counts for the first group of cancer cell lines undergoing pooled shRNA screening.</p

Table1_screening information.xls

<p>Cell line information file.</p

Achilles_QC_v2.4.3.rnai.Gs.gct

Achilles_QC_v2.4.3.rnai.Gs.gct is the ATARiS-processed, gene level file for 216 cancer cell lines undergoing shRNA pooled screening

CP0004_20131120_19mer_trans_v1.chip

<p>The shRNA to gene mapping file</p

Table2_SNP_genotyping.xls

<p>File of a panel of SNP genotypes (fingerprinting assays) per cell line for quality control purposes.  This also includes the identity with either a pre-screen fingerprint of each cell line or the SNP genotype from the CCLE SNP6.0 array data for that cell line.</p

Achilles_QC_v2.4.3.rnai.gct

Achilles_QC_v2.4.3.rnai.gct is the final shRNA-level file from pooled screening of 216 cancer cell lines, performed in quadruplicate. See Achilles_Analysis_README_v2.4.3 for processing steps

Achilles_QC_v2.4.3.shRNA.table.txt

Per shRNA quality file from the ATARiS gene summarization of the shRNA data

cBOTv8_sbsv3_allreps_log.gct

<p>cBOTv8_sbsv3_allreps_log.gct is the raw normalized and logged read counts for the second group of cancer cell lines undergoing pooled shRNA screening.</p

Achilles_Analysis_README_v2.4.3.txt

<p>Achilles_Analysis_README_v2.4.3.txt is the file describing data processing steps of pooled shRNA screening of 216 cancer cell lines.</p