ICES and PICES Strategies for Coordinating Research on the Impacts of Climate Change on Marine Ecosystems

The social, economic, and ecological consequences of projected climate change on fish and fisheries are issues of global concern. In 2012, the International Council for the Exploration of the Sea (ICES) and the North Pacific Marine Science Organization (PICES) established a Strategic Initiative on Climate Change Effects on Marine Ecosystems (SICCME) to synthesize and to promote innovative, credible, and objective science-based advice on the impacts of climate change on marine ecosystems in the Northern Hemisphere. SICCME takes advantage of the unique and complementary strengths of the two organizations to develop a research initiative that focuses on their shared interests. A phased implementation will ensure that SICCME will be responsive to a rapidly evolving research area while delivering ongoing syntheses of existing knowledge, thereby advancing new science and methodologies and communicating new insights at each phase

Genomic investigations of unexplained acute hepatitis in children

Since its first identification in Scotland, over 1,000 cases of unexplained paediatric hepatitis in children have been reported worldwide, including 278 cases in the UK1. Here we report an investigation of 38 cases, 66 age-matched immunocompetent controls and 21 immunocompromised comparator participants, using a combination of genomic, transcriptomic, proteomic and immunohistochemical methods. We detected high levels of adeno-associated virus 2 (AAV2) DNA in the liver, blood, plasma or stool from 27 of 28 cases. We found low levels of adenovirus (HAdV) and human herpesvirus 6B (HHV-6B) in 23 of 31 and 16 of 23, respectively, of the cases tested. By contrast, AAV2 was infrequently detected and at low titre in the blood or the liver from control children with HAdV, even when profoundly immunosuppressed. AAV2, HAdV and HHV-6 phylogeny excluded the emergence of novel strains in cases. Histological analyses of explanted livers showed enrichment for T cells and B lineage cells. Proteomic comparison of liver tissue from cases and healthy controls identified increased expression of HLA class 2, immunoglobulin variable regions and complement proteins. HAdV and AAV2 proteins were not detected in the livers. Instead, we identified AAV2 DNA complexes reflecting both HAdV-mediated and HHV-6B-mediated replication. We hypothesize that high levels of abnormal AAV2 replication products aided by HAdV and, in severe cases, HHV-6B may have triggered immune-mediated hepatic disease in genetically and immunologically predisposed children

Fisheries development in northeastern Asia in conjunction with changes in climate and social systems

The status and prospects of fisheries in northeastern Asia are reviewed in conjunction with climate change and social issues. This region has the biggest yield, consumption, and international trade of fisheries products in the world. Due to increasing industrialization and greenhouse gas emissions, higher rates of warming have occurred. The impacts of climate change on fisheries could be detrimental because the main fishery products are small pelagic fish whose biomass fluctuations are sensitive to climate changes. Improvements in the economies of the nations in this region offset the demand for fish products in human diets, and employment in fisheries. It is recommended that fisheries management plans consider both changes in climate and in social systems. Stocks which migrate between national jurisdictions are in need of particular attention.Climate change Fisheries Northwestern Pacific Fishery economy Small pelagic fish

The relationship between fishing characteristics of Pacific bluefin tuna (Thunnus orientalis) and ocean conditions around Jeju Island

Abstract Pacific bluefin tuna (Thunnus orientalis) is one of the commercially important species in Korea as well as other countries of the North Pacific. Korean offshore large purse seine fisheries targeting small pelagic fishes such as chub mackerel have caught T. orientalis temporarily in the east of Jeju Island. The catch of T. orientalis in March through June occupied approximately 60% of the total. The monthly catch around Jeju Island from 2004 to 2013 showed a negative correlation (r = − 0.755, p < 0.01) with the seawater temperature at 50 m and had a significant positive correlation (r = 0.856, p < 0.01) with the Pacific Decadal Oscillation Index (PDOI). The highest catch and catch per unit effort (CPUE) of T. orientalis around Jeju Island occurred either when the seawater temperature ranged between 15 and 16 °C at 50 m or when the catch was taken near the frontal area where two water masses from offshore and coastal areas collide. The length of T. orientalis caught around Jeju Island from 2004 to 2013 ranged from 19 to 193 cm in fork length (FL). The time series of the monthly mean FL of T. orientalis had a negative correlation (r = − 0.592, p < 0.01) with the seawater temperature at 50 m and had a significant positive correlation (r = 0.668, p < 0.05) with PDOI

Evaluation of computed tomography settings in the context of visualization and discrimination of low dose injections of a novel liquid soft tissue fiducial marker in head and neck imaging

Background!#!Intraoperative incorporation of radiopaque fiducial markers at the tumor resection surface can provide useful assistance in identifying the tumor bed in postoperative imaging for RT planning and radiological follow-up. Besides titanium clips, iodine containing injectable liquid fiducial markers represent an option that has emerged more recently for this purpose. In this study, marking oral soft tissue resection surfaces, applying low dose injections of a novel Conformité Européenne (CE)-marked liquid fiducial marker based on sucrose acetoisobutyrate (SAIB) and iodinated SAIB (x-SAIB) was investigated.!##!Methods!#!Visibility and discriminability of low dose injections of SAIB/x-SAIB (10 µl, 20 µl, 30 µl) were systematically studied at different kV settings used in clinical routine in an ex-vivo porcine mandible model. Transferability of the preclinical results into the clinical setting and applicability of DE-CT were investigated in initial patients.!##!Results!#!Markers created by injection volumes as low as 10 µl were visible in CT imaging at all kV settings applied in clinical routine (70-120 kV). An injection volume of 30 µl allowed differentiation from an injection volume of 10 µl. In a total of 118 injections performed in two head and neck cancer patients, markers were clearly visible in 83% and 86% of injections. DE-CT allowed for differentiation between SAIB/x-SAIB markers and other hyperdense structures.!##!Conclusions!#!Injection of low doses of SAIB/x-SAIB was found to be a feasible approach to mark oral soft tissue resection surfaces, with injection volumes as low as 10 µl found to be visible at all kV settings applied in clinical routine. With the application of SAIB/x-SAIB reported for tumors of different organs already, mostly applying relatively large volumes for IGRT, this study adds information on the applicability of low dose injections to facilitate identification of the tumor bed in postoperative CT and on performance of the marker at different kV settings used in clinical routine

AI-based X-ray fracture analysis of the distal radius: accuracy between representative classification, detection and segmentation deep learning models for clinical practice

Objectives To aid in selecting the optimal artificial intelligence (AI) solution for clinical application, we directly compared performances of selected representative custom-trained or commercial classification, detection and segmentation models for fracture detection on musculoskeletal radiographs of the distal radius by aligning their outputs.Design and setting This single-centre retrospective study was conducted on a random subset of emergency department radiographs from 2008 to 2018 of the distal radius in Germany.Materials and methods An image set was created to be compatible with training and testing classification and segmentation models by annotating examinations for fractures and overlaying fracture masks, if applicable. Representative classification and segmentation models were trained on 80% of the data. After output binarisation, their derived fracture detection performances as well as that of a standard commercially available solution were compared on the remaining X-rays (20%) using mainly accuracy and area under the receiver operating characteristic (AUROC).Results A total of 2856 examinations with 712 (24.9%) fractures were included in the analysis. Accuracies reached up to 0.97 for the classification model, 0.94 for the segmentation model and 0.95 for BoneView. Cohen’s kappa was at least 0.80 in pairwise comparisons, while Fleiss’ kappa was 0.83 for all models. Fracture predictions were visualised with all three methods at different levels of detail, ranking from downsampled image region for classification over bounding box for detection to single pixel-level delineation for segmentation.Conclusions All three investigated approaches reached high performances for detection of distal radius fractures with simple preprocessing and postprocessing protocols on the custom-trained models. Despite their underlying structural differences, selection of one’s fracture analysis AI tool in the frame of this study reduces to the desired flavour of automation: automated classification, AI-assisted manual fracture reading or minimised false negatives