13 research outputs found
Flow chart of the pathway enrichment analysis of the GWAS on BC survival.
<p>Flow chart of the pathway enrichment analysis of the GWAS on BC survival.</p
Consistently enriched categories of the GWAS on BC survival.
<p>Only categories enriched in all four gene lists and by more than one tool were considered consistently enriched. * Genes present in the 0.01 gene list (allelic SNP <i>p</i>-value cut-off 0.01).</p
Distribution of the seven generic terms among the 50 top pathways in the enrichment analyses of the 13 gene lists.
<p>Distribution of the seven generic terms among the 50 top pathways in the enrichment analyses of the 13 gene lists.</p
Number of SNPs and genes corresponding to allelic <i>p</i>-value cut-offs of the GWAS on BC survival.
<p>Number of SNPs and genes corresponding to allelic <i>p</i>-value cut-offs of the GWAS on BC survival.</p
GeneGo pathway “Cytoskeleton remodeling”.
<p>Barometer: 1 = 0.01 gene list; 2 = general metastasis signature; 3 = brain metastasis signature. orange = ECM-receptor interaction, purple = Adherens junction pathway, red = Calcium signaling pathway, pink = Focal adhesion pathway, yellow = TGF-β signaling pathway, green = Wnt signaling pathway, blue = Smooth muscle contraction/relaxation.</p
GeneGo pathway “Airway smooth muscle contraction in asthma”.
<p>Barometers: 1 = 0.01 gene list; 2 = general metastasis signature. red = Calcium signaling pathway, blue = Smooth muscle contraction/relaxation.</p