Limited resolution and multiresolution methods in complex network community detection

Detecting community structure in real-world networks is a challenging problem. Recently, it has been shown that the resolution of methods based on optimizing a modularity measure or a corresponding energy is limited; communities with sizes below some threshold remain unresolved. One possibility to go around this problem is to vary the threshold by using a tuning parameter, and investigate the community structure at variable resolutions. Here, we analyze the resolution limit and multiresolution behavior for two different methods: a q-state Potts method proposed by Reichard and Bornholdt, and a recent multiresolution method by Arenas, Fernandez, and Gomez. These methods are studied analytically, and applied to three test networks using simulated annealing.Comment: 6 pages, 2 figures.Minor changes from previous version, shortened a couple of page

A Comparison of Ground Motion Characteristics from Induced Seismic Events in Alberta with those in Oklahoma

Ground motions from potentially-induced seismic events in Alberta of magnitude (M) \u3e 3, recorded within 100 km, are empirically characterized in terms of their response spectral shapes and amplitudes. Ground motions are compared statistically to those from induced events in Oklahoma, as well as to three benchmark ground motion prediction equations (GMPEs), derived from natural events. Discrepancies between Alberta and Oklahoma events appear to be magnitude-dependent, and distance-independent. For events greater than M~4, the ground motions appear equivalent in the two regions. High-frequency motions from M\u3c 3.5 events in Alberta are weaker than those of natural events, even those at shallow focal depths. For larger magnitudes, the residuals between the Alberta motions and benchmark GMPEs (Yenier and Atkinson, 2015; Atkinson, 2015; Abrahamson et al., 2014) suggest that observations are in reasonable accord with the models. These results provide a further understanding of ground motions from induced events in Alberta

Critical evaluation of the computational methods used in the forced polymer translocation

In forced polymer translocation, the average translocation time, $\tau$, scales with respect to pore force, $f$, and polymer length, $N$, as $\tau \sim f^{-1} N^{\beta}$. We demonstrate that an artifact in Metropolis Monte Carlo method resulting in breakage of the force scaling with large $f$ may be responsible for some of the controversies between different computationally obtained results and also between computational and experimental results. Using Langevin dynamics simulations we show that the scaling exponent $\beta \le 1 + \nu$ is not universal, but depends on $f$. Moreover, we show that forced translocation can be described by a relatively simple force balance argument and $\beta$ to arise solely from the initial polymer configuration

Dynamics of polymer ejection from capsid

Polymer ejection from a capsid through a nanoscale pore is an important biological process with relevance to modern biotechnology. Here, we study generic capsid ejection using Langevin dynamics. We show that even when the ejection takes place within the drift-dominated region there is a very high probability for the ejection process not to be completed. Introducing a small aligning force at the pore entrance enhances ejection dramatically. Such a pore asymmetry is a candidate for a mechanism by which a viral ejection is completed. By detailed high-resolution simulations we show that such capsid ejection is an out-of-equilibrium process that shares many common features with the much studied driven polymer translocation through a pore in a wall or a membrane. We find that the escape times scale with polymer length, $\tau \sim N^\alpha$. We show that for the pore without the asymmetry the previous predictions corroborated by Monte Carlo simulations do not hold. For the pore with the asymmetry the scaling exponent varies with the initial monomer density (monomers per capsid volume) $\rho$ inside the capsid. For very low densities $\rho \le 0.002$ the polymer is only weakly confined by the capsid, and we measure $\alpha = 1.33$, which is close to $\alpha = 1.4$ obtained for polymer translocation. At intermediate densities the scaling exponents $\alpha = 1.25$ and $1.21$ for $\rho = 0.01$ and $0.02$, respectively. These scalings are in accord with a crude derivation for the lower limit $\alpha = 1.2$. For the asymmetrical pore precise scaling breaks down, when the density exceeds the value for complete confinement by the capsid, $\rho \gtrapprox 0.25$. The high-resolution data show that the capsid ejection for both pores, analogously to polymer translocation, can be characterized as a multiplicative stochastic process that is dominated by small-scale transitions.Comment: 10 pages, 6 figure

The “broken escalator” phenomenon: Vestibular dizziness interferes with locomotor adaptation

BACKGROUND: Although vestibular lesions degrade postural control we do not know the relative contributions of the magnitude of the vestibular loss and subjective vestibular symptoms to locomotor adaptation. OBJECTIVE: To study how dizzy symptoms interfere with adaptive locomotor learning. METHODS: We examined patients with contrasting peripheral vestibular deficits, vestibular neuritis in the chronic stable phase (n = 20) and strongly symptomatic unilateral Meniere’s disease (n = 15), compared to age-matched healthy controls (n = 15). We measured locomotor adaptive learning using the “broken escalator” aftereffect, simulated on a motorised moving sled. RESULTS: Patients with Meniere’s disease had an enhanced “broken escalator” postural aftereffect. More generally, the size of the locomotor aftereffect was related to how symptomatic patients were across both groups. Contrastingly, the degree of peripheral vestibular loss was not correlated with symptom load or locomotor aftereffect size. During the MOVING trials, both patient groups had larger levels of instability (trunk sway) and reduced adaptation than normal controls. CONCLUSION: Dizziness symptoms influence locomotor adaptation and its subsequent expression through motor aftereffects. Given that the unsteadiness experienced during the “broken escalator” paradigm is internally driven, the enhanced aftereffect found represents a new type of self-generated postural challenge for vestibular/unsteady patients

Sex differences in intimate relationships

Social networks have turned out to be of fundamental importance both for our understanding human sociality and for the design of digital communication technology. However, social networks are themselves based on dyadic relationships and we have little understanding of the dynamics of close relationships and how these change over time. Evolutionary theory suggests that, even in monogamous mating systems, the pattern of investment in close relationships should vary across the lifespan when post-weaning investment plays an important role in maximising fitness. Mobile phone data sets provide us with a unique window into the structure of relationships and the way these change across the lifespan. We here use data from a large national mobile phone dataset to demonstrate striking sex differences in the pattern in the gender-bias of preferred relationships that reflect the way the reproductive investment strategies of the two sexes change across the lifespan: these differences mainly reflect women's shifting patterns of investment in reproduction and parental care. These results suggest that human social strategies may have more complex dynamics than we have tended to assume and a life-history perspective may be crucial for understanding them.Comment: 5 pages, 3 figures, contains electronic supplementary materia