Variant frequencies from targeted sequencing for Dam E.

Variant frequencies from targeted sequencing for Dam E.</p

Primers used for targeted sequencing and their corresponding start and stop positions in the ZIKV genome.

Primers used for targeted sequencing and their corresponding start and stop positions in the ZIKV genome.</p

Graphical representation of variable sites from targeted sequencing of early stages of vertical transmission.

Sequencing data summarized in Tables 1–3 is shown. All variable sites across all three dams are plotted, with each nucleotide represented by a different color. Ref indicates the reference nucleotide, and proportions of reference vs. alternate allele are represented in each bar graph. Plac = placenta, Fet = fetal body, nr = no reads. Matched tissues are separated by light gray lines, different samples are separated by dark gray lines.</p

Variant frequencies in whole genome vs. targeted sequencing evaluating ZIKV diversity in late stages of vertical transmission for matched placentas and fetal brains from Dam F.

Variant frequencies in whole genome vs. targeted sequencing evaluating ZIKV diversity in late stages of vertical transmission for matched placentas and fetal brains from Dam F.</p

Variant frequencies from targeted sequencing for Dam B.

Variant frequencies from targeted sequencing for Dam B.</p

Variant frequencies in inoculum and whole genome sequencing for combined placentas and fetuses from set 1 evaluating ZIKV diversity during early stages of vertical transmission.

Variant frequencies in inoculum and whole genome sequencing for combined placentas and fetuses from set 1 evaluating ZIKV diversity during early stages of vertical transmission.</p

Variant frequencies in whole genome vs. targeted sequencing evaluating ZIKV diversity in late stages of vertical transmission for matched placentas and fetal brains from Dam E.

Variant frequencies in whole genome vs. targeted sequencing evaluating ZIKV diversity in late stages of vertical transmission for matched placentas and fetal brains from Dam E.</p

Variant frequencies from targeted sequencing for dam D.

Variant frequencies from targeted sequencing for dam D.</p

Variant frequencies from targeted sequencing for Dam F.

Variant frequencies from targeted sequencing for Dam F.</p

Variant frequencies from targeted sequencing for Dam A.

Variant frequencies from targeted sequencing for Dam A.</p