Binding Mode Identification for 7-keto-8-Aminopelargonic Acid Synthase (AtKAPAS) Inhibitors

In this study, we determined the 3D structure of Arabidopsis thaliana KAPAS by homology modeling. We then investigated the binding mode of compounds obtained from the in-house library using computational docking methods. From the flexible docking study, we achieved high dock scores for the active compounds denoted in this study as compound 3 and compound 4. Thus, we highlight the flexibility of specific residues, Lys 312 and Phe 172, when used in active sites

Effects of a multi-herbal extract on type 2 diabetes

<p>Abstract</p> <p>Background</p> <p>An aqueous extract of multi-hypoglycemic herbs of <it>Panax ginseng </it>C.A.Meyer, <it>Pueraria lobata, Dioscorea batatas Decaisne, Rehmannia glutinosa, Amomum cadamomum Linné, Poncirus fructus </it>and <it>Evodia officinalis </it>was investigated for its anti-diabetic effects in cell and animal models.</p> <p>Methods</p> <p>Activities of PPARγ agonist, anti-inflammation, AMPK activator and anti-ER stress were measured in cell models and in <it>db/db </it>mice (a genetic animal model for type 2 diabetes).</p> <p>Results</p> <p>While the extract stimulated PPARγ-dependent luciferase activity and activated AMPK in C2C12 cells, it inhibited TNF-α-stimulated IKKβ/NFkB signaling and attenuated ER stress in HepG2 cells. The <it>db/db </it>mice treated with the extract showed reduced fasting blood glucose and HbA_1clevels, improved postprandial glucose levels, enhanced insulin sensitivity and significantly decreased plasma free fatty acid, triglyceride and total cholesterol.</p> <p>Conclusion</p> <p>The aqueous extract of these seven hypoglycemic herbs demonstrated many therapeutic effects for the treatment of type 2 diabetes in cell and animal models.</p

Collaboration Management System between the Device based on Machine Socialization

The basis of IoT is in the interconnection and communication between different devices to achieve common goals through internet. These devices are interconnected through a network which enables communication within these devices without any direct human intervention. But with such great potential, this technology reached a road-block due to incompatibility within various manufacturers of the same type of device and proprietary standards. I started this project with this problem in mind and I have created a brand and platform independent machine socialization device manager system. In this paper, to overcome the above mentioned problem, I have utilized micro controllers to connect to various existing device to solve the problem and propose a device to device communication with collaboration management. This technology is not restricted to usage in only the new network module enabled smart devices but also this can be used to operate the existing old (not smart) home appliances. Machine socialization was made possible with the use of XML, (an internet standard schema language) which we have used to gather device, task and relationship information of all the devices to show schema information

One-directional flow of ionic solutions along fine electrodes under an alternating current electric field

Electric fields are widely used for controlling liquids in various research fields. To control a liquid, an alternating current (AC) electric field can offer unique advantages over a direct current (DC) electric field, such as fast and programmable flows and reduced side effects, namely the generation of gas bubbles. Here, we demonstrate one-directional flow along carbon nanotube nanowires under an AC electric field, with no additional equipment or frequency matching. This phenomenon has the following characteristics: First, the flow rates of the transported liquid were changed by altering the frequency showing Gaussian behaviour. Second, a particular frequency generated maximum liquid flow. Third, flow rates with an AC electric field (approximately nanolitre per minute) were much faster than those of a DC electric field (approximately picolitre per minute). Fourth, the flow rates could be controlled by changing the applied voltage, frequency, ion concentration of the solution and offset voltage. Our finding of microfluidic control using an AC electric field could provide a new method for controlling liquids in various research fields

Bacillus subtilis JW1 enhances plant growth and nutrient uptake of Chinese cabbage through gibberellins secretion

In the present study, we have isolated rhizospheric bacteria JW1 from rice paddy in Andong, South Korea. The culture filtrate (CF) analysis of JW1 showed higher contents of gibberellins GA1, GA4, GA7, organic acids, fatty acids and tricalcium phosphates. The 16S rDNA gene sequencing and phylogentic analysis revealed that thestrain JW1 has a 99% homology with Bacillus subtilis sequences from BLAST search.The growth promotion capability of the strain JW1 was initially assessed on Waito-C and Whayoung-beyo rice cultivars, which improved the growth attributes of the rice cultivars. Similarly, a significant increase in plant height, biomass, chlorophyll contents and nutrient uptake have been noticed, when the Chinese cabbage was treated with JW1 strain. From the results, it is concluded that the integrative use of B. subtilis JW1 can promote plant growthby secreting bioactive compounds. Therefore, B. subtilis JW1 may be utilized as an eco-friendly bio-fertilizer in the agricultural fields after successful field trials

The application of diniconazole and prohydrojasmon as plant growth regulators to induce growth and tuberization of potato

The potato is a major vegetable crop around the world, and tuberous hypertrophy is a highly complex developmental process effected by various factors that play central role in potato growth. Tuber growth under hypertrophic conditions is regulated by variations in carbohydrates and endogenous phytohormones. In the present study, we aimed to establish the basis for the enlargement of potato tubers, including changes in the chemical content of factors related to tuber formation and hypertrophy based on phytohormonal regulation, plants height and tuber biomass and other selected attributes. Our results reveal that the application of plant growth regulators such as diniconazole (Din) and prohydrojasmon (PDJ) significantly impact on potato plants growth and yield, including that of tubers. Plants treated with Din and PDJ effectively showed stunted growth and re-duced development but enhance the tuber formation and its weight. Plants treated with Din and PDJ significantly reduced the GAs and ABA accumulation and increase the sucrose level and cause significant increase in tuber development. In conclusion, a higher gibberellin content in potatoes may inhibit tuberization. Diniconazole and PDJ treatment reduced gibberellin accumulation, which in turn regu-lated abscisic acid content, demonstrating that the abscisic acid content mostly increased as gibberellin content decreased, and thereby promoting tuberization

Endophytic fungal association via gibberellins and indole acetic acid can improve plant growth under abiotic stress: an example of Paecilomyces formosus LHL10

<p>Abstract</p> <p>Background</p> <p>Endophytic fungi are little known for exogenous secretion of phytohormones and mitigation of salinity stress, which is a major limiting factor for agriculture production worldwide. Current study was designed to isolate phytohormone producing endophytic fungus from the roots of cucumber plant and identify its role in plant growth and stress tolerance under saline conditions.</p> <p>Results</p> <p>We isolated nine endophytic fungi from the roots of cucumber plant and screened their culture filtrates (CF) on gibberellins (GAs) deficient mutant rice cultivar <it>Waito-C </it>and normal GAs biosynthesis rice cultivar Dongjin-byeo. The CF of a fungal isolate CSH-6H significantly increased the growth of <it>Waito-C </it>and Dongjin-byeo seedlings as compared to control. Analysis of the CF showed presence of GAs (GA₁, GA₃, GA₄, GA₈, GA₉, GA₁₂, GA₂₀and GA₂₄) and indole acetic acid. The endophyte CSH-6H was identified as a strain of <it>Paecilomyces formosus </it>LHL10 on the basis of phylogenetic analysis of ITS sequence similarity. Under salinity stress, <it>P. formosus </it>inoculation significantly enhanced cucumber shoot length and allied growth characteristics as compared to non-inoculated control plants. The hypha of <it>P. formosus </it>was also observed in the cortical and pericycle regions of the host-plant roots and was successfully re-isolated using PCR techniques. <it>P. formosus </it>association counteracted the adverse effects of salinity by accumulating proline and antioxidants and maintaining plant water potential. Thus the electrolytic leakage and membrane damage to the cucumber plants was reduced in the association of endophyte. Reduced content of stress responsive abscisic acid suggest lesser stress convened to endophyte-associated plants. On contrary, elevated endogenous GAs (GA₃, GA₄, GA₁₂and GA₂₀) contents in endophyte-associated cucumber plants evidenced salinity stress modulation.</p> <p>Conclusion</p> <p>The results reveal that mutualistic interactions of phytohormones secreting endophytic fungi can ameliorate host plant growth and alleviate adverse effects of salt stress. Such fungal strain could be used for further field trials to improve agricultural productivity under saline conditions.</p