Differentiation and Replication of Spots in a Reaction Diffusion System with Many Chemicals

The replication and differentiation of spots in reaction diffusion equations are studied by extending the Gray-Scott model with self-replicating spots to include many degrees of freedom needed to model systems with many chemicals. By examining many possible reaction networks, the behavior of this model is categorized into three types: replication of homogeneous fixed spots, replication of oscillatory spots, and differentiation from `m ultipotent spots'. These multipotent spots either replicate or differentiate into other types of spots with different fixed-point dynamics, and as a result, an inhomogeneous pattern of spots is formed. This differentiation process of spots is analyzed in terms of the loss of chemical diversity and decrease of the local Kolmogorov-Sinai entropy. The relevance of the results to developmental cell biology and stem cells is also discussed.Comment: 8 pages, 12 figures, Submitted to EP

Detailed Measurements of Characteristic Profiles of Magnetic Diffuse Scattering in ErB2_2C2_2

Detailed neutron diffraction measurements on a single crystalline ErB$_2$C$_2$ were performed. We observed magnetic diffuse scattering which consists of three components just above the transition temperatures, which is also observed in characteristic antiferroquadrupolar ordering compounds HoB$_2$C$_2$ and TbB$_2$C$_2$. The result of this experiments indicates that the antiferroquadrupolar interaction is not dominantly important as a origin of the magnetic diffuse scattering.Comment: 5 pages, 5 figures, submitted to J. Phys. Soc. Jp

State Differentiation by Transient Truncation in Coupled Threshold Dynamics

Dynamics with a threshold input--output relation commonly exist in gene, signal-transduction, and neural networks. Coupled dynamical systems of such threshold elements are investigated, in an effort to find differentiation of elements induced by the interaction. Through global diffusive coupling, novel states are found to be generated that are not the original attractor of single-element threshold dynamics, but are sustained through the interaction with the elements located at the original attractor. This stabilization of the novel state(s) is not related to symmetry breaking, but is explained as the truncation of transient trajectories to the original attractor due to the coupling. Single-element dynamics with winding transient trajectories located at a low-dimensional manifold and having turning points are shown to be essential to the generation of such novel state(s) in a coupled system. Universality of this mechanism for the novel state generation and its relevance to biological cell differentiation are briefly discussed.Comment: 8 pages. Phys. Rev. E. in pres

Periodicity Manifestations in the Turbulent Regime of Globally Coupled Map Lattice

We revisit the globally coupled map lattice (GCML). We show that in the so called turbulent regime various periodic cluster attractor states are formed even though the coupling between the maps are very small relative to the non-linearity in the element maps. Most outstanding is a maximally symmetric three cluster attractor in period three motion (MSCA) due to the foliation of the period three window of the element logistic maps. An analytic approach is proposed which explains successfully the systematics of various periodicity manifestations in the turbulent regime. The linear stability of the period three cluster attractors is investigated.Comment: 34 pages, 8 Postscript figures, all in GCML-MSCA.Zi

Origin of complexity in multicellular organisms

Through extensive studies of dynamical system modeling cellular growth and reproduction, we find evidence that complexity arises in multicellular organisms naturally through evolution. Without any elaborate control mechanism, these systems can exhibit complex pattern formation with spontaneous cell differentiation. Such systems employ a `cooperative' use of resources and maintain a larger growth speed than simple cell systems, which exist in a homogeneous state and behave 'selfishly'. The relevance of the diversity of chemicals and reaction dynamics to the growth of a multicellular organism is demonstrated. Chaotic biochemical dynamics are found to provide the multi-potency of stem cells.Comment: 6 pages, 2 figures, Physical Review Letters, 84, 6130, (2000

Recursiveness, Switching, and Fluctuations in a Replicating Catalytic Network

A protocell model consisting of mutually catalyzing molecules is studied in order to investigate how chemical compositions are transferred recursively through cell divisions under replication errors. Depending on the path rate, the numbers of molecules and species, three phases are found: fast switching state without recursive production, recursive production, and itinerancy between the above two states. The number distributions of the molecules in the recursive states are shown to be log-normal except for those species that form a core hypercycle, and are explained with the help of a heuristic argument.Comment: 4 pages (with 7 figures (6 color)), submitted to PR

Spectral Properties and Synchronization in Coupled Map Lattices

Spectral properties of Coupled Map Lattices are described. Conditions for the stability of spatially homogeneous chaotic solutions are derived using linear stability analysis. Global stability analysis results are also presented. The analytical results are supplemented with numerical examples. The quadratic map is used for the site dynamics with different coupling schemes such as global coupling, nearest neighbor coupling, intermediate range coupling, random coupling, small world coupling and scale free coupling.Comment: 10 pages with 15 figures (Postscript), REVTEX format. To appear in PR

Non-universal dependence of spatiotemporal regularity on randomness in coupling connections

We investigate the spatiotemporal dynamics of a network of coupled nonlinear oscillators, modeled by sine circle maps, with varying degrees of randomness in coupling connections. We show that the change in the basin of attraction of the spatiotemporal fixed point due to varying fraction of random links $p$, is crucially related to the nature of the local dynamics. Even the qualitative dependence of spatiotemporal regularity on $p$ changes drastically as the angular frequency of the oscillators change, ranging from monotonic increase or monotonic decrease, to non-monotonic variation. Thus it is evident here that the influence of random coupling connections on spatiotemporal order is highly non-universal, and depends very strongly on the nodal dynamics.Comment: 9 pages, 4 figure

Condensation in Globally Coupled Populations of Chaotic Dynamical Systems

The condensation transition, leading to complete mutual synchronization in large populations of globally coupled chaotic Roessler oscillators, is investigated. Statistical properties of this transition and the cluster structure of partially condensed states are analyzed.Comment: 11 pages, 4 figures, revte