Bovine Polledness – An Autosomal Dominant Trait with Allelic Heterogeneity

The persistent horns are an important trait of speciation for the family Bovidae with complex morphogenesis taking place briefly after birth. The polledness is highly favourable in modern cattle breeding systems but serious animal welfare issues urge for a solution in the production of hornless cattle other than dehorning. Although the dominant inhibition of horn morphogenesis was discovered more than 70 years ago, and the causative mutation was mapped almost 20 years ago, its molecular nature remained unknown. Here, we report allelic heterogeneity of the POLLED locus. First, we mapped the POLLED locus to a ∼381-kb interval in a multi-breed case-control design. Targeted re-sequencing of an enlarged candidate interval (547 kb) in 16 sires with known POLLED genotype did not detect a common allele associated with polled status. In eight sires of Alpine and Scottish origin (four polled versus four horned), we identified a single candidate mutation, a complex 202 bp insertion-deletion event that showed perfect association to the polled phenotype in various European cattle breeds, except Holstein-Friesian. The analysis of the same candidate interval in eight Holsteins identified five candidate variants which segregate as a 260 kb haplotype also perfectly associated with the POLLED gene without recombination or interference with the 202 bp insertion-deletion. We further identified bulls which are progeny tested as homozygous polled but bearing both, 202 bp insertion-deletion and Friesian haplotype. The distribution of genotypes of the two putative POLLED alleles in large semi-random sample (1,261 animals) supports the hypothesis of two independent mutations

Behavioral aspects of electronic bull separation and mate allocation in multiple-sire mating paddocks

C1 - Journal Articles RefereedControlling spatial positioning of cattle through use of electronic collars could provide new ways to farm under extensive conditions. This study examined the potential for bulls to be controlled during mating using mild electric shocks delivered through radio-controlled collars. Eighteen Belmont Red bulls were fitted with collars containing the Global Positioning System and that were able to emit a mild electric shock (500 mW) at the top of the neck behind the poll. Eighteen Belmont Red cows were fitted with Global Positioning System collars only. The experiment was replicated 3 times in 3 paddocks. Each paddock contained 2 bulls and 1 cow in induced estrus. On d 1, the bulls were either assigned to the cow or not assigned to the cow, and on d 2, the assignments were reversed, and bulls received the other treatment using a new cow. Treatments were applied for 2 h on each day. The nonassigned bull received a mild electric shock on approach to either the cow or to a bull, whereas the assigned bull received a mild electric shock on approach to the other bull only. The electric shock was applied when the bulls were within approximately 10 m and moving toward the nonallowed animal. The electric shock was terminated when the animal responded by stopping movement toward the nonallowed animal. In the first 10 min, nonassigned bulls spent less time within 5 m of the cow (P = 0.03) than assigned bulls. Assigned bulls spent more time close to the cow during the entire 120 min on d 1 than on d 2 (P = 0.014). On d 1, the assigned bulls moved more toward the cow and the nonassigned bull than they did on d 2 (P = 0.02). Assigned bulls displayed more sexual behaviors than nonassigned bulls (P = 0.004). Nonassigned bulls were sometimes observed not to approach the cow despite a change in its location. This suggests that the bull associated the electric shock with the cow and not with the location in which it received the electric shock. Instances were observed in which the cow pursued the nonassigned bull, in which case the bull did not receive an electric shock, and this may reflect the preference of the cow. This study demonstrated that bulls can be separated and prevented from approaching a cow in estrus using a mild electric shock. However, mate allocation was not completely successful due to the potential for cow preference for certain bulls

Evaluation of Bonsmara and Belmont Red cattle breeds in South Africa, 2, Genetic parameters for growth and fertility

Genetic parameters were estimated for growth and fertility indicator traits in a South African beef cattle population. Measurements on 5601 pedigreed progeny of 96 Bonsmara sires, 18 Belmont Red sires and 20 Bonsmara x Belmont Red cross sires were recorded over 19 years in 4 diverse climate regions of South Africa. Growth traits were measured on growing stock from birth to 18 months at pasture. Cow weights were measured at calving and weaning. Age at first calving, and repeated measurement of calving interval were recorded on 1993 breading females as indicators of reproductive performance. The traits were analysed using univariate and bivariate animal models with maternal effects fitted

Genetics of adaptive traits in heifers and their relationship to growth, pubertal and carcass traits in two tropical beef cattle genotypes

Genetic analyses of tropical adaptive traits were conducted for two tropically adapted genotypes, Brahman (BRAH) and Tropical Composite (TCOMP). Traits included tick scores (TICK), faecal egg counts (EPG), buffalo fly-lesion scores (FLY), rectal temperatures under hot conditions (TEMP), coat scores (COAT), coat colour on a light to dark scale (COLOUR), navel scores (NAVEL) and temperament measured as flight time (FT). The data comprised adaptive measures recorded at specific times on 2071 heifers comprising 966 BRAH and 1105 TCOMP. The genetic correlations of these adaptive traits with heifer growth, scanned carcass, pubertal measures and steer growth and carcass traits were estimated. BRAH recorded significantly (P 50%). In general, phenotypic correlations between these adaptive traits were low and genetic correlations were non-significant, implying trait independence. Genetic correlations between EPG and weight traits (0.29 to 0.44) indicated a positive relationship, implying no deleterious effect of worms on the growth at a genetic level, especially in TCOMP. The negative genetic correlations between COAT and body-condition score across genotypes (0.33 to 0.48) indicated genetic advantage of sleek coats in tropics. A positive genetic correlation between COAT and the age at the first-observed corpus luteum (0.73) in BRAH indicated that BRAH with sleeker coats were genetically early maturing. Further, sleeker coats were genetically indicative of lower weights and lower fat cover at puberty in BRAH. The scanned fat measures at rump and rib sites for feedlot steers showed strong genetic correlation (0.500.58) with heifer TEMP, indicating genetically fatter animals had genetically lower heat tolerance. In BRAH, a positive genetic association between heifer COLOUR and scanned fat measures in steers (0.500.54) implied increased fatness in genetically darker animals. Further, in BRAH, a strong negative genetic correlation (0.97) was observed between steer retail beef yield and heifer TEMP, indicating a favourable genetic association. In general, genetic correlations between adaptive traits and other economic traits were genotype specific. Further, it can be concluded that selection for productive and pubertal traits in tropical beef cattle genotypes would not adversely affect their tropical adaptability. © 2009 CSIRO

Evaluation of Bonsmara and Belmont Red cattle breeds in South Africa, 2, Genetic parameters for growth and fertility

Genetic parameters were estimated for growth and fertility indicator traits in a South African beef cattle population. Measurements on 5601 pedigreed progeny of 96 Bonsmara sires, 18 Belmont Red sires and 20 Bonsmara x Belmont Red cross sires were recorded over 19 years in 4 diverse climate regions of South Africa. Growth traits were measured on growing stock from birth to 18 months at pasture. Cow weights were measured at calving and weaning. Age at first calving, and repeated measurement of calving interval were recorded on 1993 breading females as indicators of reproductive performance. The traits were analysed using univariate and bivariate animal models with maternal effects fitted

Association weight matrix for the genetic dissection of puberty in beef cattle

We describe a systems biology approach for the genetic dissection of complex traits based on applying gene network theory to the results from genome-wide associations. The associations of single-nucleotide polymorphisms (SNP) that were individually associated with a primary phenotype of interest, age at puberty in our study, were explored across 22 related traits. Genomic regions were surveyed for genes harboring the selected SNP. As a result, an association weight matrix (AWM) was constructed with as many rows as genes and as many columns as traits. Each {i, j} cell value in the AWM corresponds to the z-score normalized additive effect of the it gene (via its neighboring SNP) on the jth trait. Columnwise, the AWM recovered the genetic correlations estimated via pedigree-based restricted maximum-likelihood methods. Rowwise, a combination of hierarchical clustering, gene network, and pathway analyses identified genetic drivers that would have been missed by standard genome-wide association studies. Finally, the promoter regions of the AWM-predicted targets of three key transcription factors (TFs), estrogen-related receptor γ (ESRRG), Pal3 motif, bound by a PPAR-γ homodimer, IR3 sites (PPARG), and Prophet of Pit 1, PROP paired-like homeobox 1 (PROP1), were surveyed to identify binding sites corresponding to those TFs. Applied to our case, the AWM results recapitulate the known biology of puberty, captured experimentally validated binding sites, and identified candidate genes and gene–gene interactions for further investigation