A simple model for the kinetics of packaging of DNA in to a capsid against an external force

We propose a simple model for the kinetics of packaging of viral DNA in to a capsid against an external force trying to prevent it. The model leads to a Butler-Volmer type dependence of the rate of packaging on the pulling force F

The dynamics of loop formation in a semiflexible polymer

The dynamics of loop formation by linear polymer chains has been a topic of several theoretical/experimental studies. Formation of loops and their opening are key processes in many important biological processes. Loop formation in flexible chains has been extensively studied by many groups. However, in the more realistic case of semiflexible polymers, not much results are available. In a recent study (K. P. Santo and K. L. Sebastian, Phys. Rev. E, \textbf{73}, 031293 (2006)), we investigated opening dynamics of semiflexible loops in the short chain limit and presented results for opening rates as a function of the length of the chain. We presented an approximate model for a semiflexible polymer in the rod limit, based on a semiclassical expansion of the bending energy of the chain. The model provided an easy way to describe the dynamics. In this paper, using this model, we investigate the reverse process, i.e., the loop formation dynamics of a semiflexible polymer chain by describing the process as a diffusion-controlled reaction. We perform a detailed multidimensional analysis of the problem and calculate closing times for a semiflexible chain which leads to results that are physically expected. Such a multidimensional analysis leading to these results does not seem to exist in the literature so far.Comment: 37 pages 4 figure

A Fatal Complication Following Hybrid Total Arch Replacement with Supra-aortic Artery Translocation and Endovascular Stenting

This case highlights the successful management of acute Type B dissection complicated by visceral malperfusion. Even though the procedure of hybrid supra-aortic translocation and endovascular stenting corrected the malperfusion, it is important for vigilant CT scan surveillance for the post operative complications which can occur with this procedure

Characterising strongly normalising intuitionistic sequent terms

This paper gives a characterisation, via intersection types, of the strongly normalising terms of an intuitionistic sequent calculus (where LJ easily embeds). The soundness of the typing system is reduced to that of a well known typing system with intersection types for the ordinary lambda-calculus. The completeness of the typing system is obtained from subject expansion at root position. This paper's sequent term calculus integrates smoothly the lambda-terms with generalised application or explicit substitution. Strong normalisability of these terms as sequent terms characterises their typeability in certain "natural'' typing systems with intersection types. The latter are in the natural deduction format, like systems previously studied by Matthes and Lengrand et al., except that they do not contain any extra, exceptional rules for typing generalised applications or substitution

Hadronic interaction of eta and eta-prime mesons with nucleons

Due to their short life-time, flavour-neutral mesons cannot be utilized as free secondary beams or targets, and therefore a study of their interaction with nucleons is not possible via direct scattering experiments. This interaction is, however, accessible via its influence on the energy dependence - and on the phase space distributions of the cross sections for reactions in which these mesons are produced. In case of the p p --> p p eta reaction the experimentally determined distributions of the differential cross sections close to the production threshold cannot be described by taking into account the S-wave proton-proton and proton-eta interaction only. Here we show that the angular distributions determined at the COSY-11 facility reveal some evidence for P-wave admixture in the proton-proton subsystem already at an excess energy as low as Q = 15.5 MeV. We also present that one can estimate the relative strength of the eta-nucleon and eta-prime-nucleon interactions by comparison of the eta and eta-prime production yield.Comment: 4 pages, 3 figures, Talk given at 16th International Conference on Particles and Nuclei (PANIC 02), Osaka, Japan, 30 Sep - 4 Oct 200

A possible magnetar nature for IGR J16358-4726

We present detailed spectral and timing analysis of the hard X-ray transient IGR J16358-4726 using multisatellite archival observations. A study of the source flux time history over 6 yr suggests that lower luminosity transient outbursts can be occurring in intervals of at most 1 yr. Joint spectral fits of the higher luminosity outburst using simultaneous Chandra ACIS and INTEGRAL ISGRI data reveal a spectrum well described by an absorbed power-law model with a high-energy cutoff plus an Fe line. We detected the 1.6 hr pulsations initially reported using Chandra ACIS also in the INTEGRAL ISGRI light curve and in subsequent XMM-Newton observations. Using the INTEGRAL data, we identified a spin-up of 94 s ( = 1.6 × 10-4), which strongly points to a neutron star nature for IGR J16358-4726. Assuming that the spin-up is due to disk accretion, we estimate that the source magnetic field ranges between 1013 and 1015 G, depending on its distance, possibly supporting a magnetar nature for IGR J16358-4726

Experimental study of the eta-meson interaction with two-nucleons

By means of the COSY-11 detection system, using a stochastically cooled proton beam of the cooler synchrotron COSY and a hydrogen cluster target, we have performed a high statistics measurement of the pp --> pp eta reaction at an excess energy of Q = 15.5 MeV. The experiment was based on the four-momentum determination of both outgoing protons. This permits to identify pp --> pp eta events and to derive the complete kinematical information of the eta-p-p-system allowing for subsequent investigations of the eta-p interaction. The observed spectrum of the invariant mass of the proton-proton system deviates strongly from the phase-space distribution revealing the influence of the final-state-interaction among the outgoing particles or nontrivial features of the primary production mechanism.Comment: 6 pages, 4 figures, Talk presented at Meson 2002, 7th International Workshop on Meson Production, Properties and Interaction, Cracow, Poland, 24-28 May 200