Lutzomyia adiketis sp. n. (Diptera: Phlebotomidae), a vector of Paleoleishmania neotropicum sp. n. (Kinetoplastida: Trypanosomatidae) in Dominican amber

<p>Abstract</p> <p>Background</p> <p>Amber fossils can be used to trace the history of disease-vector associations because microorganisms are preserved "in situ" inside the alimentary tract and body cavity of blood-sucking insects.</p> <p>Results</p> <p><it>Lutzomyia adiketis </it>sp. n. (Phlebotomidae: Diptera) is described from Dominican amber as a vector of <it>Paleoleishmania neotropicum </it>sp. n. (Kinetoplastida: Trypanosomatidae). The fossil sand fly differs from all previously described extinct and extant members of the genus by the following combination of characters: Sc forked with the branches meeting the costa and radius veins; wing L/W value of 4.1; a δ value of 18; a ratio β/α value of 0.86, and the shape and size of the spatulate rods on the ninth sternite. The trypanosomatid is characterized by the structure of its promastigotes, amastigotes and paramastigotes and its transmission by an extinct species of sand fly.</p> <p>Conclusion</p> <p>Morphological characters show that the fossil sand fly is a new extinct species and that it is host to a digenetic species of trypanosomatid. This study provides the first fossil evidence that Neotropical sand flies were vectors of trypanosomatids in the mid-Tertiary (20–30 mya).</p

Some properties of three related viruses: Andean potato latent, dulcamara mottle, and Ononis yellow mosaic

RESP-544

Screening Surface Contamination with BetaCage

Existing screening facilities are insufficiently sensitive to meet the needs of rare‐event experiments for low‐energy electron emitters and alpha‐decaying isotopes. To provide such screening, the BetaCage will be a low‐background, atmospheric‐pressure neon drift chamber with unprecedented sensitivity to emitters of low‐energy electrons and alpha particles. Minimization of the detector mass and use of radiopure materials reduce background events. The chamber design accepts nearly all alphas and low‐energy electrons from the sample surface while allowing excellent rejection of residual backgrounds. A non‐radiopure prototype is under construction to test the design. The BetaCage will provide new infrastructure for rare‐event science as well as for a wider community that uses radioactive screening for areas including archaeology, biology, climatology, environmental science, geology, planetary science, and integrated‐circuit quality control

In situ ¹⁰Be modeling and terrain analysis constrain subglacial quarrying and abrasion rates at Sermeq Kujalleq (Jakobshavn Isbræ), Greenland

Glacial erosion creates diagnostic landscapes and vast amounts of sediment. However, knowledge about the rate at which glaciers erode and sculpt bedrock and the proportion of quarried (plucked) versus abraded material is limited. To address this, we quantify subglacial erosion rates and constrain the ratio of quarrying to abrasion during a recent, ∼ 200-year long overriding of a bedrock surface fronting, Sermeq Kujalleq (Jakobshavn Isbræ), Greenland, by combining 10Be analyses, a digital terrain model, and field observations. Cosmogenic 10Be measurements along a 1.2 m tall quarried bedrock step reveal a triangular wedge of quarried rock. Using individual 10Be measurements from abraded surfaces across the study area, we derive an average abrasion rate of 0.13 ± 0.08 mm yr−1. By applying this analysis across a ∼ 1.33 km2 study area, we estimate that the Greenland Ice Sheet quarried 378 ± 45 m3 and abraded 322 ± 204 m3 of material at this site. These values result in an average total erosion rate of 0.26 ± 0.16 mm yr−1, with abrasion and quarrying contributing in roughly equal proportions within uncertainty. Additional cosmogenic 10Be analysis and surface texture mapping indicate that many lee steps are relicts from the prior glaciation and were not re-quarried during the recent overriding event. These new observations of glacier erosion in a recently exposed landscape provide one of the first direct measurements of quarrying rates and indicate that quarrying accounts for roughly half of the total glacial erosion in representative continental shield lithologies.</p

Quantitative Assessment of the Sensitivity of Various Commercial Reverse Transcriptases Based on Armored HIV RNA

The in-vitro reverse transcription of RNA to its complementary DNA, catalyzed by the enzyme reverse transcriptase, is the most fundamental step in the quantitative RNA detection in genomic studies. As such, this step should be as analytically sensitive, efficient and reproducible as possible, especially when dealing with degraded or low copy RNA samples. While there are many reverse transcriptases in the market, all claiming to be highly sensitive, there is need for a systematic independent comparison of their applicability in quantification of rare RNA transcripts or low copy RNA, such as those obtained from archival tissues.We performed RT-qPCR to assess the sensitivity and reproducibility of 11 commercially available reverse transcriptases in cDNA synthesis from low copy number RNA levels. As target RNA, we used a serially known number of Armored HIV RNA molecules, and observed that 9 enzymes we tested were consistently sensitive to ∼1,000 copies, seven of which were sensitive to ∼100 copies, while only 5 were sensitive to ∼10 RNA template copies across all replicates tested. Despite their demonstrated sensitivity, these five best performing enzymes (Accuscript, HIV-RT, M-MLV, Superscript III and Thermoscript) showed considerable variation in their reproducibility as well as their overall amplification efficiency. Accuscript and Superscript III were the most sensitive and consistent within runs, with Accuscript and Superscript II ranking as the most reproducible enzymes between assays.We therefore recommend the use of Accuscript or Superscript III when dealing with low copy number RNA levels, and suggest purification of the RT reactions prior to downstream applications (eg qPCR) to augment detection. Although the results presented in this study were based on a viral RNA surrogate, and applied to nucleic acid lysates derived from archival formalin-fixed paraffin embedded tissue, their relative performance on RNA obtained from other tissue types may vary, and needs future evaluation

Antimicrobial Peptide Evolution in the Asiatic Honey Bee Apis cerana

The Asiatic honeybee, Apis cerana Fabricius, is an important honeybee species in Asian countries. It is still found in the wild, but is also one of the few bee species that can be domesticated. It has acquired some genetic advantages and significantly different biological characteristics compared with other Apis species. However, it has been less studied, and over the past two decades, has become a threatened species in China. We designed primers for the sequences of the four antimicrobial peptide cDNA gene families (abaecin, defensin, apidaecin, and hymenoptaecin) of the Western honeybee, Apis mellifera L. and identified all the antimicrobial peptide cDNA genes in the Asiatic honeybee for the first time. All the sequences were amplified by reverse transcriptase-polymerase chain reaction (RT-PCR). In all, 29 different defensin cDNA genes coding 7 different defensin peptides, 11 different abaecin cDNA genes coding 2 different abaecin peptides, 13 different apidaecin cDNA genes coding 4 apidaecin peptides and 34 different hymenoptaecin cDNA genes coding 13 different hymenoptaecin peptides were cloned and identified from the Asiatic honeybee adult workers. Detailed comparison of these four antimicrobial peptide gene families with those of the Western honeybee revealed that there are many similarities in the quantity and amino acid components of peptides in the abaecin, defensin and apidaecin families, while many more hymenoptaecin peptides are found in the Asiatic honeybee than those in the Western honeybee (13 versus 1). The results indicated that the Asiatic honeybee adult generated more variable antimicrobial peptides, especially hymenoptaecin peptides than the Western honeybee when stimulated by pathogens or injury. This suggests that, compared to the Western honeybee that has a longer history of domestication, selection on the Asiatic honeybee has favored the generation of more variable antimicrobial peptides as protection against pathogens