Movements and growth of tagged young-of-the-year Atlantic croaker (Micropogonias undulatus L.) in restored and reference marsh creeks in Delaware Bay, USA

Abstract The residence time, movements, and growth of tagged young-of-the-year Atlantic croaker, Micropogonias undulatus L., were studied from July to October 1998 as measures of the success of a marsh restoration project adjacent to Delaware Bay. A total of 8173 croaker (41 -121 mm SL) were tagged from each of two creeks in both marshes during July and August with internal sequential coded wire microtags. A prior tag-retention study in the laboratory found a 95% tag retention rate. Of those tagged, 3.6% were recaptured within and nearby the study creeks using seines, otter trawls, and weirs during a 105-day period. Recapture percentages ranged from 1.5% to 6.1% in individual creeks in the restored marsh. There was some movement of tagged fish between creeks in the restored marsh and out into the main creek, but 95% of the recaptures were made in the subtidal and intertidal portions of the same creek in which they were tagged. Fewer fish were recaptured at the reference marsh (1.6% recapture; n = 1489 tagged) up to 50 days after tagging, with no evidence of movement between creeks. The average individual growth rates for recaptured croaker was the same in both restored (0.69 mm/day) and reference (0.63 mm/day) marshes before egress from the creeks in September and October. As a result, both created creeks in a restored marsh and natural creeks in a reference marsh appeared to be utilized as young-of-the-year habitat in a similar way during the summer and until egress out the marshes during the fall, thus this restoration effort has been successful in creating suitable habitat for Atlantic croaker.

Resource use among patients with diabetes, diabetic neuropathy, or diabetes with depression

BACKGROUND: Diabetes is often associated with complications and comorbidities. The purpose of this research is to compare medical resources used by patients with the following diagnoses: diabetes mellitus (DM), diabetic neuropathy (DN), and diabetes mellitus combined with comorbid depression (DD). METHODS: Adult patients who were diagnosed with DM, DN, or DD were included in the study. There were 55,972 patients in the DM cohort, 2,146 in the DN, and 2,379 in the DD. P values for comparisons between the three mutually exclusive cohorts were conducted using the Tukey-Kramer method. Cost comparisons among the cohorts were conducted using a stepwise multivariate regression that controlled for patient characteristics and comorbid conditions. RESULTS: Individuals in the DM or DN cohorts were generally more likely to use antidiabetic medications than patients in the DD group. Those diagnosed with DN or DD generally used more pain medications than individuals in the DM cohort. The DM cohort had significantly lower diabetes-related total medical costs ($1,297 v$5,125, p < 0.0001) and lower total medical costs ($4,819 v$24,765, p < 0.0001) than the DN cohort. The DM cohort also had significantly lower diabetes-related total medical costs ($1,297 v$3,264, p < 0.0001) as well as significantly lower total medical costs ($4,819 v$19,298, p < 0.0001) than the DD cohort. CONCLUSION: Results from this study indicated significant differences in demographic characteristics, comorbidities, and medication use among individuals diagnosed with DM, DN, or DD. These differences translated into significant cost differences. Patients diagnosed with DN or DD had higher diabetes-related costs than patients diagnosed with DM

Habitat use and movement of the mummichog (Fundulus heteroclitus) in a restored salt marsh.

ABSTRACT: The mummichog, Fundulus heteroclitus, is one of the most abundant macrofaunal components of salt marsh ecosystems along the east coast of the United States. During April-November 1998, we determined the habitat use and movement patterns of young-of-the-year (YOY) and adult mummichogs in a restored marsh, formerly a salt hay farm, and an adjacent creek in order to expand our understanding of the ecology of the species and evaluate the success of the restoration. Four major fish habitat types (large first-order natural creek, second-order created creek, linear drainage ditch, and marsh surface) were identified within the study site. Patterns of relative abundance and mark and recapture using coded wire tags were used to determine the habitat use, tidal movements, home range, and site fidelity of the species within these habitat types. A total of 14,784 fish, ranging from 20-100 mm SL, were captured with wire mesh traps and tagged, and 1,521 (10.3%) fish were recaptured. A variety of gears were used to attempt to recapture fish across all habitat types, including wire mesh traps, push nets, and otter trawls. Based on abundance and recaptures of tagged fish, the YOY and adults primarily used the shallow subtidal and intertidal areas of the created creek, the intertidal drainage ditches, and the marsh surface of the restored marsh but not the larger, first-order natural creek. At low tide, large numbers were found in the subtidal areas of the created creek; these then moved onto the marsh surface on the flooding tide. Elevation, and thus hydroperiod, appeared to influence the microscale use of the marsh surface. We estimated the home range of adults and large YOY (20-100 mm SL) to be 15 ha at high tide, which was much larger than previously quantified. There was strong site fidelity to the created creek at low tide. The habitat use and movement patterns of the mummichog appeared similar to that reported for natural marshes. Coupled with the results of other studies on the feeding, growth, and production of this species in this restored marsh, the species appeared to have responded well to the restoration

White perch Morone americana (Gmelin, 1789) habitat choice and movements: Comparisons between Phragmites-invaded and Spartina reference marsh creeks based on acoustic telemetry

An investigation of the effects of the Phragmites invasion on movements and habitat use focused on ultrasonic telemetry of white perch (Morone americana) throughout Alloway Creek, Delaware Bay, New Jersey. Of the individuals tracked (192-266 mm FL), there was high site fidelity (19 out of 30 individuals) but there was also variability in movement patterns, home range size, and habitat use. On average, individual fish spent most of their time stationary (67%), and substantially less time moving (22%) and tended to move up creek with flooding tides, and down creek with ebbing tides. Higher movement levels occurred at mid-ebb and mid-flood stages when water velocity was at its highest. Eighteen individuals had tidal excursions -either long distance movements with the tide or excursions onto the marsh surface or into shallow creeks at high tide. Individuals originally tagged in Spartina creeks tended to utilize only Spartina areas (12/13 tagged fish stayed in Spartina), whereas none of the individuals tagged in Phragmites creeks stayed in Phragmites areas (0 out of 5 tagged fish). These results suggest that the tagged individuals did not prefer Phragmites habitats. Further, this study indicates that it is important to consider animal behavior such as movement patterns, home range area and habitat use when evaluating the effectiveness of restoration programs. Such measures can provide insight into why altered habitats differ from reference sites in terms of quality, identify critical resources for animals and enhance our understanding of how animals contribute to ecosystem function

Inter and intra-estuary variability in ingress, condition and settlement of the American eel, Anguilla rostrata: implications for estimating and understanding recruitment

The objective of this study was to quantify spatial and temporal variability of anguillid glass eel ingress within and between adjacent watersheds in order to help illuminate the mechanisms moderating annual recruitment. Because single fixed locations are often used to assess annual recruitment, the intra-annual dynamics of ingress across multiple sites often remains unresolved. To address this question, plankton nets and eel collectors were deployed weekly to synoptically quantify early stage Anguilla rostrata abundance at 12 sites across two New Jersey estuaries over an ingress season. Numbers of early-stage glass eels collected at the inlet mouths were moderately variable within and between estuaries over time and showed evidence for weak lunar phase and water temperature correlations. The relative condition of glass eels, although highly variable, declined significantly over the ingress season and indicated a tendency for lower condition A. rostrata to colonize sites in the lower estuary. Accumulations of glass eels and early-stage elvers retrieved from collectors (one to &gt;1500 A. rostrata per collector) at lower estuary sites were highly variable over time, producing only weak correlations between estuaries. By way of contrast, development into late-stage elvers, coupled with the large-scale colonization of up-river sites, was highly synchronized between and within estuaries and contingent on water temperatures reaching c. 10-12 • C. Averaged over the ingress season, abundance estimates were remarkably consistent between paired sites across estuaries, indicating a low degree of interestuary variability. Within an estuary, however, abundance estimates varied considerably depending on location. These results and methodology have important implications for the planning and interpretation of early-stage anguillid eel surveys as well as the understanding of the dynamic nature of ingress and the spatial scales over which recruitment varies

Fish assemblage stability over fifty years in the Lake Pontchartrain Estuary; comparisons among habitats using Canonical Correspondence Analysis

We assessed fish assemblage stability over the last half century in Lake Pontchartrain, an environmentally degraded oligohaline estuary in southeastern Louisiana. Because assemblage instability over time has been consistently associated with severe habitat degradation, we attempted to determine whether fish assemblages in demersal, nearshore, and pelagic habitats exhibited change that was unrelated to natural fluctuations in environmental variables (e.g., assemblage changes between wet and dry periods). Collection data from three gear types (trawl, beach seine, and gill nets) and monthly environmental data (salinity, temperature, and Secchi depth) were compared for four collecting periods: 1954 (dry period), 1978 (wet period), 1996–1998 (wet period), and 1998–2000 (dry period). Canonical correspondence analysis (CCA) revealed that although the three environmental variables were significantly associated with the distribution and abundance patterns of fish assemblages in all habitats (with the exception of Secchi depth for pelagic samples), most fish assemblage change occurred among sampling periods (i.e., along a temporal gradient unrelated to changing environmental variables). Assemblage instability was the most pronounced for fishes collected by trawls from demersal habitats. A marked lack of cyclicity in the trawl data CCA diagram indicated a shift away from a baseline demersal assemblage of 50 yr ago. Centroid positions for the five most collected species indicated that three benthic fishes, Atlantic croaker (Micropogonias undulatus), spot (Leiostomus xanthurus), and hardhead catfish (Arius felis), were more dominant inWe assessed fish assemblage stability over the last half century in Lake Pontchartrain, an environmentally degraded oligohaline estuary in southeastern Louisiana. Because assemblage instability over time has been consistently associated with severe habitat degradation, we attempted to determine whether fish assemblages in demersal, nearshore, and pelagic habitats exhibited change that was unrelated to natural fluctuations in environmental variables (e.g., assemblage changes between wet and dry periods). Collection data from three gear types (trawl, beach seine, and gill nets) and monthly environmental data (salinity, temperature, and Secchi depth) were compared for four collecting periods: 1954 (dry period), 1978 (wet period), 1996–1998 (wet period), and 1998–2000 (dry period). Canonical correspondence analysis (CCA) revealed that although the three environmental variables were significantly associated with the distribution and abundance patterns of fish assemblages in all habitats (with the exception of Secchi depth for pelagic samples), most fish assemblage change occurred among sampling periods (i.e., along a temporal gradient unrelated to changing environmental variables). Assemblage instability was the most pronounced for fishes collected by trawls from demersal habitats. A marked lack of cyclicity in the trawl data CCA diagram indicated a shift away from a baseline demersal assemblage of 50 yr ago. Centroid positions for the five most collected species indicated that three benthic fishes, Atlantic croaker (Micropogonias undulatus), spot (Leiostomus xanthurus), and hardhead catfish (Arius felis), were more dominant in past demersal assemblages (1954 and 1978). A different situation was shown for planktivorous species collected by trawls with bay anchovy (Anchoa mitchilli) becoming more dominant in recent assemblages and Gulf enhaden (Brevoortia patronus) remaining equally represented in assemblages over time. Changes in fish assemblages from nearshore (beach seine) and pelagic (gill net) habitats were more closely related to environmental fluctuations, though the CCA for beach seine data also indicated a decrease in the dominance of M. undulatus and an increase in the proportion of A. mitchilli over time. The reduced assemblage role of benthic fishes and the marked assemblage change indicated by trawl data suggest that over the last half century demersal habitats in Lake Pontchartrain have been impacted more by multiple anthropogenic stressors than nearshore or pelagic habitats. past demersal assemblages (1954 and 1978). A different situation was shown for planktivorous species collected by trawls with bay anchovy (Anchoa mitchilli) becoming more dominant in recent assemblages and Gulf menhaden (Brevoortia patronus) remaining equally represented in assemblages over time. Changes in fish assemblages from nearshore (beach seine) and pelagic (gill net) habitats were more closely related to environmental fluctuations, though the CCA for beach seine data also indicated a decrease in the dominance of M. undulatus and an increase in the proportion of A. mitchilli over time. The reduced assemblage role of benthic fishes and the marked assemblage change indicated by trawl data suggest that over the last half century demersal habitats in Lake Pontchartrain have been impacted more by multiple anthropogenic stressors than nearshore or pelagic habitats

Effects of Slotted Water Control Structures on Nekton Movement within Salt Marshes

Water control structures (WCSs) restrict hydrological connectivity in salt marshes and thereby impede nekton movement within the greater habitat mosaic. Transient fishery species, which spawn outside salt marshes and must get past these barriers to reach spawning areas or salt-marsh nurseries, are especially vulnerable to these structures. Water control structures incorporating slots (narrow vertical openings spanning most of the water column) are thought to improve nekton passage; however, few studies have directly examined nekton passage through WCS slots. Dual-frequency identification sonar (DIDSON) acoustic imaging was used monthly (April-September 2010) on diurnal flood tides to examine nekton movement through 15-cm-wide slots at two identical WCSs located in Louisiana tidal marsh channels. Nekton behavior was compared between these WCSs and a nearby natural salt-marsh creek. Examination of 12 h of subsampled acoustic data revealed large concentrations of salt-marsh nekton at the WCSs (n = 2,970 individuals total), but passage rates through the slots were low (\u3c= 10% of total observed individuals migrated via the slots). Most migrating fish were observed leaving the managed area and swimming against a flood tide. The mean size of migrating individuals (similar to 25 cm TL) did not differ in relation to swimming direction (going into versus exiting the managed marsh) and was similar to that reported from other studies examining similar slot widths. Nekton formed congregations in the WCS channel, but no congregations were observed in the natural salt-marsh creek, even though nekton species composition and sizes were similar among sites. The WCSs in our study appear to function as ecological hot spots, where large individuals may encounter enhanced foraging opportunities but also fishing mortality and where smaller individuals may experience greater predation rates

Speed breeding for multiple quantitative traits in durum wheat

Plant breeding requires numerous generations to be cycled and evaluated before an improved cultivar is released. This lengthy process is required to introduce and test multiple traits of interest. However, a technology for rapid generation advance named 'speed breeding' was successfully deployed in bread wheat (Triticum aestivum L.) to achieve six generations per year while imposing phenotypic selection for foliar disease resistance and grain dormancy. Here, for the first time the deployment of this methodology is presented in durum wheat (Triticum durum Desf.) by integrating selection for key traits, including above and below ground traits on the same set of plants. This involved phenotyping for seminal root angle (RA), seminal root number (RN), tolerance to crown rot (CR), resistance to leaf rust (LR) and plant height (PH). In durum wheat, these traits are desirable in environments where yield is limited by in-season rainfall with the occurrence of CR and epidemics of LR. To evaluate this multi-trait screening approach, we applied selection to a large segregating F2 population (n = 1000) derived from a bi-parental cross (Outrob4/Caparoi). A weighted selection index (SI) was developed and applied. The gain for each trait was determined by evaluating F3 progeny derived from 100 'selected' and 100 'unselected' F2 individuals.Transgressive segregation was observed for all assayed traits in the Outrob4/Caparoi F2 population. Application of the SI successfully shifted the population mean for four traits, as determined by a significant mean difference between 'selected' and 'unselected' F3 families for CR tolerance, LR resistance, RA and RN. No significant shift for PH was observed.The novel multi-trait phenotyping method presents a useful tool for rapid selection of early filial generations or for the characterization of fixed lines out-of-season. Further, it offers efficient use of resources by assaying multiple traits on the same set of plants. Results suggest that when performed in parallel with speed breeding in early generations, selection will enrich recombinant inbred lines with desirable alleles and will reduce the length and number of years required to combine these traits in elite breeding populations and therefore cultivars.Samir Alahmad, Eric Dinglasan, Kung Ming Leung, Adnan Riaz, Nora Derbal, Kai P. Voss-Fels, Jason A. Able, Filippo M. Bassi, Jack Christopher and Lee T. Hicke

Ataluren delays loss of ambulation and respiratory decline in nonsense mutation Duchenne muscular dystrophy patients

Aim: We investigated the effect of ataluren plus standard of care (SoC) on age at loss of ambulation (LoA) and respiratory decline in patients with nonsense mutation Duchenne muscular dystrophy (nmDMD) versus patients with DMD on SoC alone. / Patients & methods: Study 019 was a long-term Phase III study of ataluren safety in nmDMD patients with a history of ataluren exposure. Propensity score matching identified Study 019 and CINRG DNHS patients similar in disease progression predictors. / Results & conclusion: Ataluren plus SoC was associated with a 2.2-year delay in age at LoA (p = 0.0006), and a 3.0-year delay in decline of predicted forced vital capacity to <60% in nonambulatory patients (p = 0.0004), versus SoC. Ataluren plus SoC delays disease progression and benefits ambulatory and nonambulatory patients with nmDMD. / ClinicalTrials.gov: NCT01557400

A major root architecture QTL responding to water limitation in durum wheat

The optimal root system architecture (RSA) of a crop is context dependent and critical for efficient resource capture in the soil. Narrow root growth angle promoting deeper root growth is often associated with improved access to water and nutrients in deep soils during terminal drought. RSA, therefore is a drought-adaptive trait that could minimize yield losses in regions with limited rainfall. Here, GWAS for seminal root angle (SRA) identified seven marker-trait associations clustered on chromosome 6A, representing a major quantitative trait locus (qSRA-6A) which also displayed high levels of pairwise LD (r 2 = 0.67). Subsequent haplotype analysis revealed significant differences between major groups. Candidate gene analysis revealed loci related to gravitropism, polar growth and hormonal signaling. No differences were observed for root biomass between lines carrying hap1 and hap2 for qSRA-6A, highlighting the opportunity to perform marker-assisted selection for the qSRA-6A locus and directly select for wide or narrow RSA, without influencing root biomass. Our study revealed that the genetic predisposition for deep rooting was best expressed under water-limitation, yet the root system displayed plasticity producing root growth in response to water availability in upper soil layers. We discuss the potential to deploy root architectural traits in cultivars to enhance yield stability in environments that experience limited rainfall.Samir Alahmad, Khaoula El Hassouni, Filippo M. Bassi, Eric Dinglasan, Chvan Youssef, Georgia Quarry, Alpaslan Aksoy, Elisabetta Mazzucotelli, Angéla Juhász, Jason A. Able, Jack Christopher, Kai P. Voss-Fels and Lee T. Hicke