Cold-seep benthic communities in the Japan subduction zones: Geological control of community development

A large number of Calyptogena-dominated benthic communities, apparently chemosynthetically-based, were discovered at methane-rich pore-water seeps in the Japan subduction zones (3850–6000 m depth). Photographic and video surveys from four submersible dives were analyzed to study the influence of faulting, topography and substratum on exploitation of cold seeps by megafauna. Pore-water seepage occurred in a variety of geological settings, including subduction-erosion and accretionary prism formation, always in association with major faults which likely facilitated upward migration of fluids from a deep high-pressure zone. Sediment cover and manganese crusts on the seafloor appeared to block pore-water discharge, except where interrupted by erosion, slumping or outcropping. Sediment or mudstone substrata may increase lateral diffusion of rising fluids, permitting more extensive biological exploitation than where fluids discharge directly from exposed rock. Cold seeps are ephemeral. Large long-lived “fields” of cold seeps may be important in the maintenance of regional populations of seep organisms and the transfer of cold-seep productivity to the surrounding deep-sea ecosystem

5 year-long monitoring of Barkley Canyon cold-seeps with the internet operated deep-sea crawler "Wally"

Despite the technological advances of the last decades (e.g. ROVs, AUVs, cabled observatories), our knowledge of most deep-sea environments is still strongly limited by spatio-temporal sampling and observational capabilities. The novel Internet Operated Deep-Sea Crawler technology can provide high-frequency, multi-sensor data, during long-term deployments, 24/7 communication with researchers and broader spatial coverage (i.e. mobile platform) than fixed instrument installations. The crawler “Wally” is deployed at the Barkley Canyon methane hydrates site (NE Pacific, Canada; ~890 m depth) and connected to the Ocean Networks Canada NEPTUNE cabled observatory network (ONC; www. oceannetworks.ca). Here we present the environmental and biological datasets obtained from Wally instruments and cameras, during the first deployment phase (September 2010 to January 2015), as well as new features and preliminary results obtained since it was re-deployed (May 2016 – present). In addition to data provided by the standard payload of the crawler (i.e. ADCP, CTD, methane sensor, turbidity sensor and fluorometer), the hydrates community was video-monitored at different frequencies and timespans. Photomosaics were generated at two distinct locations, in order to map chemosynthetic bacterial mats and vesicomyid clam colonies covering the ~2-3 m high hydrate mounds, and document their temporal dynamics. The crawler followed the development of a deep-sea shell taphonomic experiment aiming to quantify biogenic carbon fluxes at the hydrates environment. The composition and diel activity patterns of the hydrates megafaunal community were studied with the use of linear video-transects conducted from February 2013 to April 2014. Since the summer of 2016, video-frames recorded at different locations of the site are analyzed for a biodiversity study and photomosaicing of the hydrate mounds continues, with 3D modelling of the mound structures also available as a new feature of the crawler deployed in May 2016. All data are archived in real-time and can be accessed online on the Ocean Networks Canada database. As deep-sea crawler technology and similar mobile, benthic platform technologies progress towards full operational autonomy, they will provide an even greater capacity for future monitoring and understanding of dynamic, extreme environments such as methane hydrate fields.Peer Reviewe

Temporal and Vertical Oxygen Gradients Modulate Nitrous Oxide Production in a Seasonally Anoxic Fjord: Saanich Inlet, British Columbia

Nitrous oxide (N2O) is a strong greenhouse gas and an ozone depleting agent. In marine environments, N2O is produced biologically via ammonium oxidation, nitrite, and nitrate reduction. The relative importance of these principle production pathways is strongly influenced by oxygen availability. We conducted 15N tracer experiments of N2O production in parallel with measurements of N2O concentration and natural abundance isotopes/isotopomers in Saanich Inlet, a seasonally anoxic fjord, to investigate how temporal and vertical oxygen gradients regulate N2O production pathways and rates. In April, June, and August 2018, the depth of the oxic‐anoxic interface (dissolved oxygen = 2.5 μmol L−1 isoline) progressively deepened from 110 to 160 m. Within the oxygenated and suboxic water column, N2O supersaturation coincided with peak ammonium oxidation activity. Conditions in the anoxic deep water were potentially favorable to N2O production from nitrate and nitrite reduction, but N2O undersaturation was observed indicating that N2O consumption exceeded rates of production. In October, tidal mixing introduced oxygenated water from outside the inlet, displacing the suboxic and anoxic deep water. This oxygenation event stimulated N2O production from ammonium oxidation and increased water column N2O supersaturation while inhibiting nitrate and nitrite reduction to N2O. Results from 15N tracer incubation experiments and natural abundance isotopomer measurements both implicated ammonium oxidation as the dominant N2O production pathway in Saanich Inlet, fueled by high ammonium fluxes (0.6–3.5 nmol m−2 s−1) from the anoxic depths. Partial denitrification contributed little to water column N2O production because of low availability of nitrate and nitrite

Temporal and spatial variation in temperature experienced by macrofauna at main endeavour Hydrothermal vent field

A significant focus of hydrothermal vent ecological studies has been to understand how species cope with various stressors through physiological tolerance and biochemical resistance. Yet, the environmental conditions experienced by vent species have not been well characterized. This objective requires continuous observations over time intervals that can capture environmental variability at scales that are relevant to animals. We used autonomous temperature logger arrays (four roughly parallel linear arrays of 12 loggers spaced every 10–12 cm) to study spatial and temporal variations in the thermal regime experienced by hydrothermal vent macrofauna at a diffuse flow vent. Hourly temperatures were recorded over eight months from 2010 to 2011 at Grotto vent in the Main Endeavour vent field on the Juan de Fuca Ridge, a focus area of the Ocean Networks Canada cabled observatory. The conspicuous animal assemblages in video footage contained Ridgeia piscesae tubeworms, gastropods (primarily Lepetodrilus fucensis), and polychaetes (polynoid scaleworms and the palm worm Paralvinella palmiformis). Two dimensional spatial gradients in temperature were generally stable over the deployment period. The average temperature recorded by all arrays, and in some individual loggers, revealed distinctive fluctuations in temperature that often corresponded with the tidal cycle. We postulate that this may be related to changes in bottom currents or fluctuations in vent discharge. A marked transient temperature increase lasting over a period of days was observed in April 2011. While the distributions and behavior of Juan de Fuca Ridge vent invertebrates may be partially constrained by environmental temperature and temperature tolerance, except for the one transient high-temperature event, observed fluid temperatures were generally similar to the thermal preferences for some species, and typically well below lethal temperatures for all species. Average temperatures of the four arrays ranged from 4.1 to 11.0 °C during the deployment, indicating that on an hourly timescale the temperature conditions in this tubeworm community were fairly moderate and stable. The generality of these findings and behavioural responses of vent organisms to predictable rhythmicity and non-periodic temperature shifts are areas for further investigation

Management and Conservation of Hydrothermal Vent Ecosystems Report from the InterRidge Workshop: Management and Conservation of Hydrothermal Vent Ecosystems

This report presents the first formal consideration by the international scientific community of the threat to the isolated hydrothermal vent "oasis" ecosystems from human activities. The aim of the report is to increase awareness among all potential users about the importance, fragility and potential value to society, through sustainable exploitation, of hydrothermal vent ecosystems. It is recognised that human impact on these ecosystems will only increase in the future and that gaining knowledge about them is crucial to sensible management or conservation policies. Because of the current poor understanding of these unique ecosystems, a conservative and precautionary approach is suggested to proposals for future use. The major findings of the report [with page numbers] are listed below. A section proposing measures for conservation and sustainable use begins near the end of the report on page 25

Doubling Down on Wicked Problems: Ocean ArtScience Collaborations for a Sustainable Future

The UN Decade of Ocean Science for Sustainable Development recognizes the current ocean sustainability crisis and calls for a transformation of ocean science. Many of the key challenges recognized by the UN Decade are examples of wicked problems: intractable and messy situations with high stakeholder divergence. Addressing wicked ocean sustainability problems requires adaptable, iterative, and participatory approaches that can embrace multiple ways of knowing. It also requires a re-imagining of our relationship with the Ocean from extraction and resulting environmental degradation, towards the building of a sense of connection and stewardship. We propose ArtScience as a means to this end by highlighting how transdisciplinary collaborations can help create sustainable ocean futures. We reflect on a recent ArtScience event emerging from Ocean Networks Canada’s Artist-in-Residence programme. By situating ArtScience in a broader context of inter- and transdisciplinary collaborations, we demonstrate how ArtScience collaborations can help transform ocean science by envisioning previously unimagined possibilities, and establishing and strengthening relationships with diverse stakeholders through long-term mission-driven or place-based inquiry. We conclude with a call to action to acknowledge the potential these collaborations hold for addressing the challenges of the UN Ocean Decade

Correlation between the Korean Version of Asthma Control Test and Health-Related Quality of Life in Adult Asthmatics

The Asthma Control Test (ACT) is a patient-completed questionnaire developed to assess asthma control. Health-related quality of life (HRQL) in asthmatics has shown relatively low correlations with parameters of asthma control and the relationship between the ACT and HRQL in asthmatics is yet unclear. Because revalidations of translated versions of questionnaires are critical for its utilization, we first sought to validate the Korean version of ACT and then to evaluate the relationship between the ACT and HRQL. Patients (n=117) completed the ACT and asthma-related quality of life questionnaire (AQLQ) at 3 physician visits. Pulmonary function was measured and an asthma specialist rated asthma control. The Korean version of ACT was found to be reliable, valid, and responsive to changes in asthma control over time up to three consecutive visits. ACT scores correlated significantly (p=0.001) with symptoms domain (r=0.72), activity domain (r=0.65), emotional domain (r=0.69), and environmental domain (r=0.67) of AQLQ. In conclusion, the Korean version of the ACT was found to be a reliable and valid tool for measuring asthma control, and to correlate well with AQLQ scores. Moreover, the ACT was responsive to changes in AQLQ scores over time

Shining light on a deep-sea bacterial symbiont population structure with CRISPR

Many foundation species in chemosynthesis-based ecosystems rely on environmentally acquired symbiotic bacteria for their survival. Hence, understanding the biogeographic distributions of these symbionts at regional scales is key to understanding patterns of connectivity and predicting resilience of their host populations (and thus whole communities). However, such assessments are challenging because they necessitate measuring bacterial genetic diversity at fine resolutions. For this purpose, the recently discovered clustered regularly interspaced short palindromic repeats (CRISPR) constitutes a promising new genetic marker. These DNA sequences harboured by about half of bacteria hold their viral immune memory, and as such, might allow discrimination of different lineages or strains of otherwise indistinguishable bacteria. In this study, we assessed the potential of CRISPR as a hypervariable phylogenetic marker in the context of a population genetic study of an uncultured bacterial species. We used high-throughput CRISPR-based typing along with multi-locus sequence analysis (MLSA) to characterize the regional population structure of the obligate but environmentally acquired symbiont species Candidatus Endoriftia persephone on the Juan de Fuca Ridge. Mixed symbiont populations of Ca. Endoriftia persephone were sampled across individual Ridgeia piscesae hosts from contrasting habitats in order to determine if environmental conditions rather than barriers to connectivity are more important drivers of symbiont diversity. We showed that CRISPR revealed a much higher symbiont genetic diversity than the other housekeeping genes. Several lines of evidence imply this diversity is indicative of environmental strains. Finally, we found with both CRISPR and gene markers that local symbiont populations are strongly differentiated across sites known to be isolated by deep-sea circulation patterns. This research showed the high power of CRISPR to resolve the genetic structure of uncultured bacterial populations and represents a step towards making keystone microbial species an integral part of conservation policies for upcoming mining operations on the seafloor