20 research outputs found
SVM Classification and CoMSIA Modeling of UGT1A6 Interacting Molecules
The human UDP-glucuronosyltransferase
1A6 (UGT1A6) plays important
roles in elimination of many xenobiotics, including drugs. We have
experimentally assessed inhibitory properties of 46 compounds toward
UGT1A6 catalyzing the glucuronidation of 1-naphthol and built models
for predicting compounds interactions with the enzyme. The tested
compounds were divided into a training set (<i>n</i> = 31;
evaluated by 10-fold cross-validation) and an external test set (<i>n</i> = 15), both of which yielded similar accuracies (80ā81%)
and Matthews correlation coefficients (0.61ā0.63) when classified
using support vector machines. Comparative molecular similarity index
analysis (CoMSIA) modeling was conducted for nine methods of compound
alignment. The most predictive CoMSIA model was analyzed in the light
of a homology modeled UGT1A6 structure, with leave-one-out cross-validation,
yielding a <i>q</i><sup>2</sup> of 0.62 and <i>r</i><sup>2</sup> of 0.91 on the training set and a <i>r</i><sup>2</sup><sub>pred</sub> of 0.82 on the test set. The CoMSIA contour
plots highlighted the importance of H-bond donors and electrostatic
field interactions, accounting for 28% and 25% contribution of the
model, respectively
Controlled Shape and Nucleation Switching of Interfacially Polymerizable Nanoassemblies by Methyl Substitution
Interfacial polymerization of uniform
template-free nanostructures
is very challenging since many factors play determinant roles in the
final structure of the resulting nanoassemblies. Here, we present
a single oxidative coupling method for the synthesis of different
nanoshapes by addition or substitution of a methyl group on aniline
monomers to freely alter the mechanism of monomer-to-polymer conversion.
Well-defined nanotubes, nanohollows, and solid nanospheres are obtained
from aniline, <i>N</i>-methylaniline, and 2-methylaniline
polymerizations, respectively. We found that the extent of hydrophobicity
and protonation under mild acidic conditions determines the monomersā
arrangement in micelle or droplet form, reactivity, and nucleation
mechanism. These can subsequently affect the final morphology through
a fusion process to form tubular structures, external flux of monomers
to form nanohollows, and intradroplet oxidation to form solid nanospheres.
Altered biological responses, such as cytocompatibility, redox response,
hemocompatibility, and cell proliferation, are also found to be dependent
on the position of the methyl group in the nanostructures
SVM Classification and CoMSIA Modeling of UGT1A6 Interacting Molecules
The human UDP-glucuronosyltransferase
1A6 (UGT1A6) plays important
roles in elimination of many xenobiotics, including drugs. We have
experimentally assessed inhibitory properties of 46 compounds toward
UGT1A6 catalyzing the glucuronidation of 1-naphthol and built models
for predicting compounds interactions with the enzyme. The tested
compounds were divided into a training set (<i>n</i> = 31;
evaluated by 10-fold cross-validation) and an external test set (<i>n</i> = 15), both of which yielded similar accuracies (80ā81%)
and Matthews correlation coefficients (0.61ā0.63) when classified
using support vector machines. Comparative molecular similarity index
analysis (CoMSIA) modeling was conducted for nine methods of compound
alignment. The most predictive CoMSIA model was analyzed in the light
of a homology modeled UGT1A6 structure, with leave-one-out cross-validation,
yielding a <i>q</i><sup>2</sup> of 0.62 and <i>r</i><sup>2</sup> of 0.91 on the training set and a <i>r</i><sup>2</sup><sub>pred</sub> of 0.82 on the test set. The CoMSIA contour
plots highlighted the importance of H-bond donors and electrostatic
field interactions, accounting for 28% and 25% contribution of the
model, respectively
Cyclodextrin-Modified Porous Silicon Nanoparticles for Efficient Sustained Drug Delivery and Proliferation Inhibition of Breast Cancer Cells
Over the past decade, the potential
of polymeric structures has been investigated to overcome many limitations
related to nanosized drug carriers by modulating their toxicity, cellular
interactions, stability, and drug-release kinetics. In this study,
we have developed a successful nanocomposite consisting of undecylenic
acid modified thermally hydrocarbonized porous silicon nanoparticles
(UnTHCPSi NPs) loaded with an anticancer drug, sorafenib, and surface-conjugated
with heptakisĀ(6-amino-6-deoxy)-Ī²-cyclodextrin (HABCD) to show
the impact of the surface polymeric functionalization on the physical
and biological properties of the drug-loaded nanoparticles. Cytocompatibility
studies showed that the UnTHCPSiāHABCD NPs were not toxic to
breast cancer cells. HABCD also enhanced the suspensibility and both
the colloidal and plasma stabilities of the UnTHCPSi NPs. UnTHCPSiāHABCD
NPs showed a significantly increased interaction with breast cancer
cells compared to bare NPs and also sustained the drug release. Furthermore,
the sorafenib-loaded UnTHCPSiāHABCD NPs efficiently inhibited
cell proliferation of the breast cancer cells
Platelet Lysate-Modified Porous Silicon Microparticles for Enhanced Cell Proliferation in Wound Healing Applications
The
new frontier in the treatment of chronic nonhealing wounds is the
use of micro- and nanoparticles to deliver drugs or growth factors
into the wound. Here, we used platelet lysate (PL), a hemoderivative
of platelets, consisting of a multifactorial cocktail of growth factors,
to modify porous silicon (PSi) microparticles and assessed both <i>in vitro</i> and <i>ex vivo</i> the properties of
the developed microsystem. PL-modified PSi was assessed for its potential
to induce proliferation of fibroblasts. The wound closure-promoting
properties of the microsystem were then assessed in an <i>in
vitro</i> wound healing assay. Finally, the PL-modified PSi microparticles
were evaluated in an <i>ex vivo</i> experiment over human
skin. It was shown that PL-modified PSi microparticles were cytocompatible
and enhanced the cell proliferation in different experimental settings.
In addition, this microsystem promoted the closure of the gap between
the fibroblast cells in the wound healing assay, in periods of time
comparable with the positive control, and induced a proliferation
and regeneration process onto the human skin in an <i>ex vivo</i> experiment. Overall, our results show that PL-modified PSi microparticles
are suitable microsystems for further development toward applications
in the treatment of chronic nonhealing wounds
Amine Modification of Thermally Carbonized Porous Silicon with Silane Coupling Chemistry
Thermally carbonized porous silicon (TCPSi) microparticles
were
chemically modified with organofunctional alkoxysilane molecules using
a silanization process. Before the silane coupling, the TCPSi surface
was activated by immersion in hydrofluoric acid (HF). Instead of regeneration
of the silicon hydride species, the HF immersion of silicon carbide
structure forms a silanol termination (SiāOH) on the surface
required for silanization. Subsequent functionalization with 3-aminopropyltriethoxysilane
provides the surface with an amine (āNH<sub>2</sub>) termination,
while the SiC-type layer significantly stabilizes the functionalized
structure both mechanically and chemically. The presence of terminal
amine groups was verified with FTIR, XPS, CHN analysis, and electrophoretic
mobility measurements. The overall effects of the silanization to
the morphological properties of the initial TCPSi were analyzed and
they were found to be very limited, making the treatment effects highly
predictable. The maximum obtained number of amine groups on the surface
was calculated to be 1.6 groups/nm<sup>2</sup>, corresponding to 79%
surface coverage. The availability of the amine groups for further
biofunctionalization was confirmed by successful biotinylation. The
isoelectric point (IEP) of amine-terminated TCPSi was measured to
be at pH 7.7, as opposed to pH 2.6 for untreated TCPSi. The effects
of the surface amine termination on the cell viability of Caco-2 and
HT-29 cells and on the in vitro fenofibrate release profiles were
also assessed. The results indicated that the surface modification
did not alter the loading of the drug inside the pores and also retained
the beneficial enhanced dissolution characteristics similar to TCPSi.
Cellular viability studies also showed that the surface modification
had only a limited effect on the biocompatibility of the PSi
Core/Shell Nanocomposites Produced by Superfast Sequential Microfluidic Nanoprecipitation
Although
a number of techniques exist for generating structured
organic nanocomposites, it is still challenging to fabricate them
in a controllable, yet universal and scalable manner. In this work,
a microfluidic platform, exploiting superfast (milliseconds) time
intervals between sequential nanoprecipitation processes, has been
developed for high-throughput production of structured core/shell
nanocomposites. The extremely short time interval between the sequential
nanoprecipitation processes, facilitated by the multiplexed microfluidic
design, allows us to solve the instability issues of nanocomposite
cores without using any stabilizers. Beyond high throughput production
rate (ā¼700 g/day on a single device), the generated core/shell
nanocomposites harness the inherent ultrahigh drug loading degree
and enhanced payload dissolution kinetics of drug nanocrystals and
the controlled drug release from polymer-based nanoparticles
Microfluidic Templated Mesoporous SiliconāSolid Lipid Microcomposites for Sustained Drug Delivery
A major challenge for a drug-delivery
system is to engineer stable drug carriers with excellent biocompatibility,
monodisperse size, and controllable release profiles. In this study,
we used a microfluidic technique to encapsulate thermally hydrocarbonized
porous silicon (THCPSi) microparticles within solid lipid microparticles
(SLMs) to overcome the drawbacks accompanied by THCPSi microparticles.
Formulation and process factors, such as lipid matrixes, organic solvents,
emulsifiers, and methods to evaporate the organic solvents, were all
evaluated and optimized to prepare monodisperse stable SLMs. FTIR
analysis together with confocal images showed the clear deposition
of THCPSi microparticles inside the monodisperse SLM matrix. The formation
of monodisperse THCPSiāsolid lipid microcomposites (THCPSiāSLMCs)
not only altered the surface hydrophobicity and morphology of THCPSi
microparticles but also remarkably enhanced their cytocompatibility
with intestinal (Caco-2 and HT-29) cancer cells. Regardless of the
solubility of the loaded therapeutics (aqueous insoluble, fenofibrate
and furosemide; aqueous soluble, methotrexate and ranitidine) and
the pH values of the release media (1.2, 5.0, and 7.4), the time for
the release of 50% of the payloads from THCPSiāSLMC was at
least 1.3 times longer than that from the THCPSi microparticles. The
sustained release of both water-soluble and -insoluble drugs together
with a reduced burst-release effect from monodisperse THCPSiāSLMC
was achieved, indicating the successful encapsulation of THCPSi microparticles
into the SLM matrix. The fabricated THCPSiāSLMCs exhibited
monodisperse spherical morphology, enhanced cytocompatibility, and
prolonged both water-soluble and -insoluble drug release, which makes
it an attractive controllable drug-delivery platform
Confinement Effects on Drugs in Thermally Hydrocarbonized Porous Silicon
Thermally hydrocarbonized porous
silicon (THCPSi) microparticles
were loaded with indomethacin (IMC) and griseofulvin (GSV) using three
different payloads between 6.2ā19.5 and 6.2ā11.4 wt
%, respectively. The drug loading parameters were selected to avoid
crystallization of the drug molecules on the external surface of the
particles that would block the pore entrances. The successfulness
of the loadings was verified with TG, DSC, and XRPD measurements.
The effects of the confinement of IMC and GSV into the small mesopores
of THCPSi were analyzed with helium pycnometry, FTIR, and NMR spectroscopy.
The results showed the density of the THCPSi loaded drugs to be ca.
10% lower than the bulk crystalline forms, while a melt quenched amorphous
drugs showed a density reduction of 3ā7.5%. DSC and FTIR results
confirmed that the drugs reside in an amorphous form within the THCPSi
pores. Similar results were obtained with NMR, which also indicated
that IMC may reside as both amorphous clusters and individual molecules
within the pores. The <sup>1</sup>H transverse relaxation times (<i>T</i><sub>2</sub>) of amorphous and THCPSi loaded drugs showed
IMC relaxation times of 0.28 ms for both the cases, whereas for GSV
the values were 0.32 and 0.39 ms, respectively, indicating similar
limited mobility in both cases. The results indicated that strong
drugācarrier interactions were not necessary for stabilizing
the amorphous state of the adsorbed drug. Dissolution tests using
biorelevant media, fasted state simulated intestinal fluid (FaSSIF)
and simulated gastric fluid (SGF), showed that THCPSi-loaded IMC and
GSV were rapidly released in FaSSIF with comparable rates to the amorphous
forms, whereas in SGF the THCPSi reduced the pH dependency in the
dissolution of IMC