1,244 research outputs found

    Fabrication of agar-based tissue-mimicking phantom for the technical evaluation of biomedical optical imaging systems

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    The development process of the optical systems for various biomedical applications typically involve evaluations of technical performance. One popular evaluation method is to use a reference object such as a phantom that exhibits similar optical properties of tissue. Fabrication of a consistent phantom with known optical properties, such as scattering and absorption, is essential for accurate technical evaluation of the optical system. This paper presents a protocol for fabricating an agar-based tissue-mimicking phantom, offering practical guidance to ensure consistent and reproducible phantom creation. In addition, optical setups that measure light information required for quantifying the optical properties via an inverse adding-doubling (IAD) method are discussed. We demonstrated the fabrication of phantoms with diverse scattering and absorption properties, and the IAD method successfully quantified the optical properties. Moreover, we employed the phantom to assess the imaging depth limitation of a hyperspectral imaging system, demonstrating potential usage of phantoms for performing technical evaluation.</p

    Fabrication of agar-based tissue-mimicking phantom for the technical evaluation of biomedical optical imaging systems

    Get PDF
    The development process of the optical systems for various biomedical applications typically involve evaluations of technical performance. One popular evaluation method is to use a reference object such as a phantom that exhibits similar optical properties of tissue. Fabrication of a consistent phantom with known optical properties, such as scattering and absorption, is essential for accurate technical evaluation of the optical system. This paper presents a protocol for fabricating an agar-based tissue-mimicking phantom, offering practical guidance to ensure consistent and reproducible phantom creation. In addition, optical setups that measure light information required for quantifying the optical properties via an inverse adding-doubling (IAD) method are discussed. We demonstrated the fabrication of phantoms with diverse scattering and absorption properties, and the IAD method successfully quantified the optical properties. Moreover, we employed the phantom to assess the imaging depth limitation of a hyperspectral imaging system, demonstrating potential usage of phantoms for performing technical evaluation.</p

    Purification and preliminary crystallization of alanine racemase from Streptococcus pneumoniae

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    <p>Abstract</p> <p>Background</p> <p>Over the past fifteen years, antibiotic resistance in the Gram-positive opportunistic human pathogen <it>Streptococcus pneumoniae </it>has significantly increased. Clinical isolates from patients with community-acquired pneumonia or otitis media often display resistance to two or more antibiotics. Given the need for new therapeutics, we intend to investigate enzymes of cell wall biosynthesis as novel drug targets. Alanine racemase, a ubiquitous enzyme among bacteria and absent in humans, provides the essential cell wall precursor, D-alanine, which forms part of the tetrapeptide crosslinking the peptidoglycan layer.</p> <p>Results</p> <p>The alanine racemases gene from <it>S. pneumoniae </it>(<it>alr</it><sub><it>SP</it></sub>) was amplified by PCR and cloned and expressed in <it>Escherichia coli</it>. The 367 amino acid, 39854 Da dimeric enzyme was purified to electrophoretic homogeneity and preliminary crystals were obtained. Racemic activity was demonstrated through complementation of an <it>alr </it>auxotroph of <it>E. coli </it>growing on L-alanine. In an alanine racemases photometric assay, specific activities of 87.0 and 84.8 U mg<sup>-1 </sup>were determined for the conversion of D- to L-alanine and L- to D-alanine, respectively.</p> <p>Conclusion</p> <p>We have isolated and characterized the alanine racemase gene from the opportunistic human pathogen <it>S. pneumoniae</it>. The enzyme shows sufficient homology with other alanine racemases to allow its integration into our ongoing structure-based drug design project.</p

    The fibre of a pinch map in a model category

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    In the category of pointed topological spaces, let F be the homotopy fibre of the pinching map X āˆŖ CA ā†’ X āˆŖ CA/ X from the mapping cone on a cofibration A ā†’ X onto the suspension of A. Gray (Proc Lond Math Soc (3) 26:497ā€“520, 1973) proved that F is weakly homotopy equivalent to the reduced product (X, A)āˆž. In this paper we prove an analogue of this phenomenon in a model category, under suitable conditions including a cube axiom.Web of Scienc

    Newborn Mice Vaccination with BCG.HIVA222 + MVA.HIVA Enhances HIV-1-Specific Immune Responses: Influence of Age and Immunization Routes

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    We have evaluated the influence of age and immunization routes for induction of HIV-1- and M. tuberculosis-specific immune responses after neonatal (7 days old) and adult (7 weeks old) BALB/c mice immunization with BCG.HIVA222 prime and MVA.HIVA boost. The specific HIV-1 cellular immune responses were analyzed in spleen cells. The body weight of the newborn mice was weekly recorded. The frequencies of HIV-specific CD8+ T cells producing IFN-Ī³ were higher in adult mice vaccinated intradermally and lower in adult and newborn mice vaccinated subcutaneously. In all cases the IFN-Ī³ production was significantly higher when mice were primed with BCG.HIVA222 compared with BCGwt. When the HIV-specific CTL activity was assessed, the frequencies of specific killing were higher in newborn mice than in adults. The prime-boost vaccination regimen which includes BCG.HIVA222 and MVA.HIVA was safe when inoculated to newborn mice. The administration of BCG.HIVA222 to newborn mice is safe and immunogenic and increased the HIV-specific responses induced by MVA.HIVA vaccine. It might be a good model for infant HIV and Tuberculosis bivalent vaccine

    A Subset of Liver NK T Cells is Activated During \u3cem\u3eLeishmania donovani\u3c/em\u3e Infection by CD1d-Bound Lipophosphoglycan

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    Natural killer (NK) T cells are activated by synthetic or self-glycolipids and implicated in innate host resistance to a range of viral, bacterial, and protozoan pathogens. Despite the immunogenicity of microbial lipoglycans and their promiscuous binding to CD1d, no pathogen-derived glycolipid antigen presented by this pathway has been identified to date. In the current work, we show increased susceptibility of NK T cellā€“deficient CD1dāˆ’/āˆ’ mice to Leishmania donovani infection and Leishmania-induced CD1d-dependent activation of NK T cells in wild-type animals. The elicited response was Th1 polarized, occurred as early as 2 h after infection, and was independent from IL-12. The Leishmania surface glycoconjugate lipophosphoglycan, as well as related glycoinositol phospholipids, bound with high affinity to CD1d and induced a CD1d-dependent IFNĪ³ response in naive intrahepatic lymphocytes. Together, these data identify Leishmania surface glycoconjugates as potential glycolipid antigens and suggest an important role for the CD1dā€“NK T cell immune axis in the early response to visceral Leishmania infection

    A Subset of Liver NK T Cells Is Activated during Leishmania donovani Infection by CD1d-bound Lipophosphoglycan

    Get PDF
    Natural killer (NK) T cells are activated by synthetic or self-glycolipids and implicated in innate host resistance to a range of viral, bacterial, and protozoan pathogens. Despite the immunogenicity of microbial lipoglycans and their promiscuous binding to CD1d, no pathogen-derived glycolipid antigen presented by this pathway has been identified to date. In the current work, we show increased susceptibility of NK T cellā€“deficient CD1dāˆ’/āˆ’ mice to Leishmania donovani infection and Leishmania-induced CD1d-dependent activation of NK T cells in wild-type animals. The elicited response was Th1 polarized, occurred as early as 2 h after infection, and was independent from IL-12. The Leishmania surface glycoconjugate lipophosphoglycan, as well as related glycoinositol phospholipids, bound with high affinity to CD1d and induced a CD1d-dependent IFNĪ³ response in naive intrahepatic lymphocytes. Together, these data identify Leishmania surface glycoconjugates as potential glycolipid antigens and suggest an important role for the CD1dā€“NK T cell immune axis in the early response to visceral Leishmania infection
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