Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge

Microbial communities and their associated metabolic activity in marine sediments have a profound impact on global biogeochemical cycles. Their composition and structure are attributed to geochemical and physical factors, but finding direct correlations has remained a challenge. Here we show a significant statistical relationship between variation in geochemical composition and prokaryotic community structure within deep-sea sediments. We obtained comprehensive geochemical data from two gravity cores near the hydrothermal vent field Loki’s Castle at the Arctic Mid-Ocean Ridge, in the Norwegian- Greenland Sea. Geochemical properties in the rift valley sediments exhibited strong centimeter-scale stratigraphic variability. Microbial populations were profiled by pyrosequencing from 15 sediment horizons (59,364 16S rRNA gene tags), quantitatively assessed by qPCR, and phylogenetically analyzed. Although the same taxa were generally present in all samples, their relative abundances varied substantially among horizons and fluctuated between Bacteria- and Archaea-dominated communities. By independently summarizing covariance structures of the relative abundance data and geochemical data, using principal components analysis, we found a significant correlation between changes in geochemical composition and changes in community structure. Differences in organic carbon and mineralogy shaped the relative abundance of microbial taxa. We used correlations to build hypotheses about energy metabolisms, particularly of the Deep Sea Archaeal Group, specific Deltaproteobacteria, and sediment lineages of potentially anaerobic Marine Group I Archaea. We demonstrate that total prokaryotic community structure can be directly correlated to geochemistry within these sediments, thus enhancing our understanding of biogeochemical cycling and our ability to predict metabolisms of uncultured microbes in deep-sea sediments

Shallow-water hydrothermalism at Milos (Greece): Nature, distribution, heat fluxes and impact on ecosystems

Submarine hydrothermal activity is responsible for heat and chemical exchanges through the seafloor. Shallow-water hydrothermal systems (SWHS), while identified around the globe, are often studied in a way that is less comprehensive than their deep-ocean counterparts (e.g., along ridges), where systematic optical and acoustic mapping is more prevalent and coupled to in situ observations and sampling. Using aerial drones, an AUV, and temperature measurements at 10-40 cm subseafloor, we investigated in 2019 one of the most extensive SWHS known to date, in Paleochori and nearby Spathi and Agia Kyriaki Bays (south of Milos, Greece). Hydrothermal venting, found from the shore to water depths of almost 500 m, shows emissions of gases and high-temperature fluids, often associated with bacterial mats and/or hydrothermal mineral precipitates. This study provides extensive drone mapping coupled with local AUV surveys for seafloor characterization and ground-truthing from the shore to similar to 20 m water depth. Seafloor photomosaics also provide a detailed context to samples, measurements and observations carried in situ. We interpret the photomosaics to define distinct seafloor types, linked to this hydrothermal activity. White hydrothermal patches (WHPs) often show a clear polygonal organization, together with outflow areas that are both more dispersed and distributed. Polygonal patterns likely result from fluid convection in a sandy porous medium heated from below. These WHPs display elevated subseafloor temperatures, typically >50 degrees C, with maximum values of similar to 75 degrees C. Photomosaics also display textures of biological origin, including seagrass and bioturbation patterns. Widespread bioturbation by burrowing shrimps is often associated with WHPs, bounding them, but also occurs on sandy seafloor away from hydrothermal patterns. Subseafloor temperatures at these bioturbated areas are of similar to 30-40 degrees C, and are thus transitional between hot WHPs and sedimented seafloor unaffected by hydrothermal activity (similar to 24 degrees C). In addition to linking subseafloor temperature data and interpreted seafloor photomosaics, our results provide a comprehensive general overview of this SWHS, of the organization of its hydrothermal outflow through the seafloor, and of the underlying subseafloor fluid circulation. This paper also gives the first perspectives on the heat fluxes of the system, and constitutes a background for other studies on the nature and distribution of microbial communities, controlled by this hydrothermal activity