19 research outputs found
Elucidating the Limiting Steps in Sulfuric AcidāBase New Particle Formation
The
molecular interactions between sulfuric acid (sa) and methylamine
(ma) are investigated using computational methods. The molecular structures
and vibrational frequencies of (sa)<sub><i>a</i></sub>(ma)<sub><i>b</i></sub> clusters, with <i>a</i>, <i>b</i> ā¤ 4, were obtained with the ĻB97X-D functional
using a 6-31++GĀ(d,p) basis set. The single-point energies were corrected
using the domain-based local pair natural orbital coupled cluster
methodīøDLPNOāCCSDĀ(T)īøwith an aug-cc-pVTZ basis
set. The calculated Gibbs free energies (Ī<i><i>G</i></i>) of the clusters are used to calculate the evaporation
rates of the (sa)<sub><i>a</i></sub>(ma)<sub><i>b</i></sub> cluster system and compare them to the corresponding ammonia
clusters. With the atmospheric cluster dynamics code (ACDC), the new
particle formation rates of the (sa)<sub><i>a</i></sub>(ma)<sub><i>b</i></sub> clusters were simulated and compared to
the (sa)<sub><i>a</i></sub>(dma)<sub><i>b</i></sub> cluster system. It is found that methylamine is not capable of explaining
observed new particle formation event in the ambient atmosphere. Looking
into the calculated Gibbs free energy profiles it is found that the
limiting steps in forming stable (sa)<sub>3ā4</sub>(base)<sub>3ā4</sub> clusters depend strongly on the formation of the
(sa)<sub>1</sub>(base)<sub>1</sub> and (sa)<sub>2</sub>(base)<sub>2</sub> clusters. These findings further support that compounds with
high basicity are required to form the very initial cluster nucleus,
which serves as the basis for forming new particles in the atmosphere
Elucidating the Limiting Steps in Sulfuric AcidāBase New Particle Formation
The
molecular interactions between sulfuric acid (sa) and methylamine
(ma) are investigated using computational methods. The molecular structures
and vibrational frequencies of (sa)<sub><i>a</i></sub>(ma)<sub><i>b</i></sub> clusters, with <i>a</i>, <i>b</i> ā¤ 4, were obtained with the ĻB97X-D functional
using a 6-31++GĀ(d,p) basis set. The single-point energies were corrected
using the domain-based local pair natural orbital coupled cluster
methodīøDLPNOāCCSDĀ(T)īøwith an aug-cc-pVTZ basis
set. The calculated Gibbs free energies (Ī<i><i>G</i></i>) of the clusters are used to calculate the evaporation
rates of the (sa)<sub><i>a</i></sub>(ma)<sub><i>b</i></sub> cluster system and compare them to the corresponding ammonia
clusters. With the atmospheric cluster dynamics code (ACDC), the new
particle formation rates of the (sa)<sub><i>a</i></sub>(ma)<sub><i>b</i></sub> clusters were simulated and compared to
the (sa)<sub><i>a</i></sub>(dma)<sub><i>b</i></sub> cluster system. It is found that methylamine is not capable of explaining
observed new particle formation event in the ambient atmosphere. Looking
into the calculated Gibbs free energy profiles it is found that the
limiting steps in forming stable (sa)<sub>3ā4</sub>(base)<sub>3ā4</sub> clusters depend strongly on the formation of the
(sa)<sub>1</sub>(base)<sub>1</sub> and (sa)<sub>2</sub>(base)<sub>2</sub> clusters. These findings further support that compounds with
high basicity are required to form the very initial cluster nucleus,
which serves as the basis for forming new particles in the atmosphere
Contribution of Methanesulfonic Acid to the Formation of Molecular Clusters in the Marine Atmosphere
Because of the lack of long-term
measurements, new particle formation
(NPF) in the marine atmosphere remains puzzling. Using quantum chemical
methods, this study elucidates the cluster formation and further growth
of sulfuric acidāmethaneĀsulfonic acidādimethylamine
(SA-MSA-DMA) clusters, relevant to NPF in the marine atmosphere. The
cluster structures and thermochemical parameters of (SA)n(MSA)m(DMA)l (n + m ā¤
4 and l ā¤ 4) systems are calculated using
density functional theory at the ĻB97X-D/6-31++G(d,p) level
of theory, and the single-point energies are calculated using high-level
DLPNO-CCSD(T0)/aug-cc-pVTZ calculations. The calculated
thermochemistry is used as input to the Atmospheric Cluster Dynamics
Code (ACDC) to gain insight into the cluster dynamics. At ambient
conditions (298.15 K, 1 atm), we find that the distribution of outgrowing
clusters primarily consists of SA and DMA, with a minor contribution
from the mixed SAāMSAāDMA clusters. At lower temperature
(278.15 K, 1 atm) the distribution broadens, and clusters containing
one or more MSA molecules emerge. These findings show that in the
cold marine atmosphere MSA likely participates in atmospheric NPF
Assessment of Density Functional Theory in Predicting Structures and Free Energies of Reaction of Atmospheric Prenucleation Clusters
This work assesses different computational strategies
for predicting
structures and Gibbās free energies of reaction of atmospheric
prenucleation clusters. The performance of 22 Density Functional Theory
functionals in predicting equilibrium structures of molecules and
water prenucleation clusters of atmospheric relevance is evaluated
against experimental data using a test set of eight molecules and
prenucleation clusters: SO<sub>2</sub>, H<sub>2</sub>SO<sub>4</sub>, CO<sub>2</sub>Ā·H<sub>2</sub>O, CS<sub>2</sub>Ā·H<sub>2</sub>O, OCSĀ·H<sub>2</sub>O, SO<sub>2</sub>Ā·H<sub>2</sub>O, SO<sub>3</sub>Ā·H<sub>2</sub>O, and H<sub>2</sub>SO<sub>4</sub>Ā·H<sub>2</sub>O. Furthermore, the functionals are tested and compared for
their ability to predict the free energy of reaction for the formation
of five benchmark atmospheric prenucleation clusters: H<sub>2</sub>SO<sub>4</sub>Ā·H<sub>2</sub>O, H<sub>2</sub>SO<sub>4</sub>Ā·(H<sub>2</sub>O)<sub>2</sub>, H<sub>2</sub>SO<sub>4</sub>Ā·NH<sub>3</sub>, HSO<sub>4</sub><sup>ā</sup>Ā·H<sub>2</sub>O, and HSO<sub>4</sub><sup>ā</sup>Ā·(H<sub>2</sub>O)<sub>2</sub>. The
performance is evaluated against experimental data, coupled cluster,
and complete basis set extrapolation procedure methods. Our investigation
shows that the utilization of the M06-2X functional with the 6-311++GĀ(3df,3pd)
basis set represents an improved approach compared to the conventionally
used PW91 functional, yielding mean absolute errors of 0.48 kcal/mol
and maximum errors of 0.67 kcal/mol compared to experimental results
Influence of Nucleation Precursors on the Reaction Kinetics of Methanol with the OH Radical
The mechanism and kinetics of the
reaction of methanol with the
OH radical in the absence and presence of common atmospheric nucleation
precursors (H<sub>2</sub>O, NH<sub>3</sub>, and H<sub>2</sub>SO<sub>4</sub>) have been investigated using different computational methods.
The statistical Gibbās free energy of formation has been calculated
using M06-2X/6-311++GĀ(3df,3pd) in order to assess cluster stability.
Methanol is found to have an unfavorable interaction with water and
ammonia but form stable complexes with sulfuric acid. The reaction
kinetics with the OH radical and methanol with or without the presence
of nucleation precursors has been studied using a CCSDĀ(T)-F12a/VDZ-F12//BH&HLYP/aug-cc-pVTZā„Eckart
methodology, and it is found that the presence of water is unlikely
to change the overall reaction rate and mechanism of hydrogen abstraction
from methanol. Ammonia is able to both enhance the reaction rate and
change the reaction mechanism, but due to a very weak interaction
with methanol, this process is unlikely to occur under atmospheric
conditions. Sulfuric acid is, in contrast, found to be able to act
as a stabilizing factor for methanol and is able to change the reaction
mechanism. These findings show the first indications that nucleation
precursors such as ammonia and sulfuric acid are able to alter the
reaction mechanism of an atmospherically relevant organic compound
Computational Study of the Clustering of a Cyclohexene Autoxidation Product C<sub>6</sub>H<sub>8</sub>O<sub>7</sub> with Itself and Sulfuric Acid
We
investigate the molecular interactions between sulfuric acid
and a recently reported C<sub>6</sub>H<sub>8</sub>O<sub>7</sub> ketodiperoxy
acid formed through autoxidation from cyclohexene and ozone. Structurally
similar but larger ELVOC (extremely low volatility organic compound)
products formed from autoxidation of monoterpenes are believed to
play a major role in the formation and early growth of atmospheric
aerosol particles. Utilizing density functional theory geometries,
with a DLPNO-CCSDĀ(T)/def2-QZVPP single point energy correction, the
stepwise Gibbs free energies of formation have been calculated, and
the stabilities of the molecular clusters have been evaluated. C<sub>6</sub>H<sub>8</sub>O<sub>7</sub> interacts weakly with both itself
and sulfuric acid, with standard free energies of formation (<i>Ī<i>G</i></i> at 298 K and 1 atm) around or
above 0 kcal/mol. This is due to the presence of strong intramolecular
hydrogen bonds in the peroxyacid groups of C<sub>6</sub>H<sub>8</sub>O<sub>7</sub>. These stabilize the isolated molecule with respect
to its clusters, and lead to unfavorable interaction energies. The
addition of sulfuric acid to clusters containing C<sub>6</sub>H<sub>8</sub>O<sub>7</sub> is somewhat more favorable, but the formed clusters
are still far more likely to evaporate than to grow further in atmospheric
conditions. These findings indicate that the O/C ratio cannot exclusively
be used as a proxy for volatility in atmospheric new particle formation
involving organic compounds. The specific molecular structure, and
especially the number of strong hydrogen binding moieties, are equally
important. The interaction between the C<sub>6</sub>H<sub>8</sub>O<sub>7</sub> compound and aqueous phase sulfate ions indicates that ELVOC-type
compounds can contribute to aerosol mass by effectively partitioning
into the condensed phase
Molecular Interaction of Pinic Acid with Sulfuric Acid: Exploring the Thermodynamic Landscape of Cluster Growth
We investigate the molecular interactions
between the semivolatile
Ī±-pinene oxidation product pinic acid and sulfuric acid using
computational methods. The stepwise Gibbs free energies of formation
have been calculated utilizing the M06-2X functional, and the stability
of the clusters is evaluated from the corresponding Ī<i>G</i> values. The first two additions of sulfuric acid to pinic
acid are found to be favorable with Ī<i>G</i> values
of ā9.06 and ā10.41 kcal/mol. Addition of a third sulfuric
acid molecule is less favorable and leads to a structural rearrangement
forming a bridged sulfuric acidāpinic acid cluster. The involvement
of more than one pinic acid molecule in a single cluster is observed
to lead to the formation of favorable (pinic acid)<sub>2</sub>(H<sub>2</sub>SO<sub>4</sub>) and (pinic acid)<sub>2</sub>(H<sub>2</sub>SO<sub>4</sub>)<sub>2</sub> clusters. The identified most favorable
growth paths starting from a single pinic acid molecule lead to closed
structures without the further possibility for attachment of either
sulfuric acid or pinic acid. This suggests that pinic acid cannot
be a key species in the first steps in nucleation, but the favorable
interactions between sulfuric acid and pinic acid imply that pinic
acid can contribute to the subsequent growth of an existing nucleus
by condensation
Strong Hydrogen Bonded Molecular Interactions between Atmospheric Diamines and Sulfuric Acid
We investigate the molecular interaction
between methyl-substituted <i>N</i>,<i>N</i>,<i>N</i>ā²,<i>N</i>ā²-ethylenediamines, propane-1,3-diamine,
butane-1,4-diamine,
and sulfuric acid using computational methods. Molecular structure
of the diamines and their dimer clusters with sulfuric acid is studied
using three density functional theory methods (PW91, M06-2X, and ĻB97X-D)
with the 6-31++GĀ(d,p) basis set. A high level explicitly correlated
CCSDĀ(T)-F12a/VDZ-F12 method is used to obtain accurate binding energies.
The reaction Gibbs free energies are evaluated and compared with values
for reactions involving ammonia and atmospherically relevant monoamines
(methylamine, dimethylamine, and trimethylamine). We find that the
complex formation between sulfuric acid and the studied diamines provides
similar or more favorable reaction free energies than dimethylamine.
Diamines that contain one or more secondary amino groups are found
to stabilize sulfuric acid complexes more efficiently. Elongating
the carbon backbone from ethylenediamine to propane-1,3-diamine or
butane-1,4-diamine further stabilizes the complex formation with sulfuric
acid by up to 4.3 kcal/mol. Dimethyl-substituted butane-1,4-diamine
yields a staggering formation free energy of ā19.1 kcal/mol
for the clustering with sulfuric acid, indicating that such diamines
could potentially be a key species in the initial step in the formation
of new particles. For studying larger clusters consisting of a diamine
molecule with up to four sulfuric acid molecules, we benchmark and
utilize a domain local pair natural orbital coupled cluster (DLPNO-CCSDĀ(T))
method. We find that a single diamine is capable of efficiently stabilizing
sulfuric acid clusters with up to four acid molecules, whereas monoamines
such as dimethylamine are capable of stabilizing at most 2ā3
sulfuric acid molecules
Strong Hydrogen Bonded Molecular Interactions between Atmospheric Diamines and Sulfuric Acid
We investigate the molecular interaction
between methyl-substituted <i>N</i>,<i>N</i>,<i>N</i>ā²,<i>N</i>ā²-ethylenediamines, propane-1,3-diamine,
butane-1,4-diamine,
and sulfuric acid using computational methods. Molecular structure
of the diamines and their dimer clusters with sulfuric acid is studied
using three density functional theory methods (PW91, M06-2X, and ĻB97X-D)
with the 6-31++GĀ(d,p) basis set. A high level explicitly correlated
CCSDĀ(T)-F12a/VDZ-F12 method is used to obtain accurate binding energies.
The reaction Gibbs free energies are evaluated and compared with values
for reactions involving ammonia and atmospherically relevant monoamines
(methylamine, dimethylamine, and trimethylamine). We find that the
complex formation between sulfuric acid and the studied diamines provides
similar or more favorable reaction free energies than dimethylamine.
Diamines that contain one or more secondary amino groups are found
to stabilize sulfuric acid complexes more efficiently. Elongating
the carbon backbone from ethylenediamine to propane-1,3-diamine or
butane-1,4-diamine further stabilizes the complex formation with sulfuric
acid by up to 4.3 kcal/mol. Dimethyl-substituted butane-1,4-diamine
yields a staggering formation free energy of ā19.1 kcal/mol
for the clustering with sulfuric acid, indicating that such diamines
could potentially be a key species in the initial step in the formation
of new particles. For studying larger clusters consisting of a diamine
molecule with up to four sulfuric acid molecules, we benchmark and
utilize a domain local pair natural orbital coupled cluster (DLPNO-CCSDĀ(T))
method. We find that a single diamine is capable of efficiently stabilizing
sulfuric acid clusters with up to four acid molecules, whereas monoamines
such as dimethylamine are capable of stabilizing at most 2ā3
sulfuric acid molecules
Hydration of Atmospheric Molecular Clusters: A New Method for Systematic Configurational Sampling
We
present a new systematic configurational sampling algorithm
for investigating the potential energy surface of hydrated atmospheric
molecular clusters. The algorithm is based on creating a Fibonacci
sphere around each atom in the cluster and adding water molecules
to each point in nine different orientations. For the sampling of
water molecules to existing hydrogen bonds, the cluster is displaced
along the hydrogen bond, and a water molecule is placed in between
in three different orientations. Generated redundant structures are
eliminated based on minimizing the root-mean-square distance of different
conformers. Initially, the clusters are sampled using the semiempirical
PM6 method and subsequently using density functional theory (M06-2X
and ĻB97X-D) with the 6-31++GĀ(d,p) basis set. Applying the developed
algorithm, we study the hydration of sulfuric acid with up to 15 water
molecules. We find that the addition of the first four water molecules
āsaturateā the sulfuric acid molecule and that they
are more thermodynamically favorable than the addition of water molecules
5ā15. Using the large generated set of conformers, we assess
the performance of approximate methods (ĻB97X-D, M06-2X, PW91,
and PW6B95-D3) in calculating the binding energies and assigning the
global minimum conformation compared to high level CCSDĀ(T)-F12a/VDZ-F12
reference calculations. The tested DFT functionals systematically
overestimate the binding energies compared to coupled cluster calculations,
and we find that this deficiency can be corrected by a simple scaling
factor